FN469-S Chr11 27585166 27585168 0 0 Deletion 2 LOC_Os11g45580 embryogenesis transmembrane protein, putative, expressed FN469-S Chr2 14878923 14878924 0 0 Deletion 1 LOC_Os02g25480 retrotransposon protein, putative, Ty1-copia subclass FN469-S Chr4 3227818 3227819 0 0 Deletion 1 LOC_Os04g06220 retrotransposon protein, putative, Ty1-copia subclass, expressed FN469-S Chr1 26044345 26044377 0 0 Deletion 32 LOC_Os01g45860 GRAS family transcription factor domain containing protein, expressed FN469-S Chr2 35800572 35807804 0 0 Deletion 7232 LOC_Os02g58560 1,3-beta-glucan synthase component, putative, expressed FN469-S Chr2 35800572 35807804 0 0 Deletion 7232 LOC_Os02g58570 PRLI-interacting factor A, putative, expressed FN469-S Chr2 35800572 35807804 0 0 Deletion 7232 LOC_Os02g58580 cation efflux family protein, putative, expressed FN469-S Chr4 15904930 16007714 0 0 Deletion 102784 LOC_Os04g26890 IN2-2 protein, putative, expressed FN469-S Chr4 15904930 16007714 0 0 Deletion 102784 LOC_Os04g26910 oxidoreductase, aldo/keto reductase family protein, putative, expressed FN469-S Chr4 15904930 16007714 0 0 Deletion 102784 LOC_Os04g26920 oxidoreductase, aldo/keto reductase family protein, putative, expressed FN469-S Chr4 15904930 16007714 0 0 Deletion 102784 LOC_Os04g26930 expressed protein FN469-S Chr4 15904930 16007714 0 0 Deletion 102784 LOC_Os04g26940 retrotransposon protein, putative, unclassified FN469-S Chr4 15904930 16007714 0 0 Deletion 102784 LOC_Os04g26950 retrotransposon protein, putative, unclassified, expressed FN469-S Chr4 15904930 16007714 0 0 Deletion 102784 LOC_Os04g26960 terpene synthase, putative, expressed FN469-S Chr4 15904930 16007714 0 0 Deletion 102784 LOC_Os04g26970 retrotransposon protein, putative, unclassified FN469-S Chr4 15904930 16007714 0 0 Deletion 102784 LOC_Os04g26980 terpene synthase, putative, expressed FN469-S Chr4 15904930 16007714 0 0 Deletion 102784 LOC_Os04g26994 retrotransposon protein, putative, unclassified FN469-S Chr4 15904930 16007714 0 0 Deletion 102784 LOC_Os04g27010 hypothetical protein FN469-S Chr4 15904930 16007714 0 0 Deletion 102784 LOC_Os04g27020 cytochrome P450, putative, expressed FN469-S Chr4 15904930 16007714 0 0 Deletion 102784 LOC_Os04g27034 retrotransposon protein, putative, unclassified FN469-S Chr4 15904930 16007714 0 0 Deletion 102784 LOC_Os04g27050 expressed protein FN469-S Chr4 15904930 16007714 0 0 Deletion 102784 LOC_Os04g27060 oxidoreductase, aldo/keto reductase family protein, putative, expressed FN469-S Chr4 15904930 16007714 0 0 Deletion 102784 LOC_Os04g27070 terpene synthase, putative, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g07920 NOI protein, nitrate-induced, putative, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g07930 retrotransposon protein, putative, unclassified, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g07940 retrotransposon protein, putative, unclassified, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g07950 retrotransposon protein, putative, unclassified, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g07960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g07970 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g07980 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g07990 retrotransposon protein, putative, unclassified, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08000 expressed protein FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08010 retrotransposon protein, putative, unclassified, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08020 retrotransposon protein, putative, unclassified, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08030 nodulin MtN3 family protein, putative, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08040 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08050 retrotransposon protein, putative, Ty3-gypsy subclass FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08060 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08072 glycosyl hydrolases, putative, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08100 cysteine proteinase inhibitor precursor, putative, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08110 hypothetical protein FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08120 beta-fructofuranosidase, insoluble isoenzyme 7 precursor, putative, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08130 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08140 hypothetical protein FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08150 expressed protein FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08160 plant protein of unknown function domain containing protein, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08170 retrotransposon protein, putative, unclassified, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08180 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08190 sulfotransferase domain containing protein, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08210 expressed protein FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08224 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08240 retrotransposon protein, putative, unclassified, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08254 expressed protein FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08270 nodulin MtN3 family protein, putative, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08280 expressed protein FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08290 retrotransposon, putative, centromere-specific, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08300 expressed protein FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08310 retrotransposon protein, putative, Ty1-copia subclass, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08330 hypothetical protein FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08340 retrotransposon protein, putative, unclassified, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08350 retrotransposon protein, putative, unclassified, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08360 expressed protein FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08370 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08379 expressed protein FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08390 CRAL/TRIO domain containing protein, expressed FN469-S Chr9 4040001 4372000 0 0 Deletion 332000 LOC_Os09g08400 expressed protein FN469-S Chr2 28046316 28046325 0 0 Deletion 9 FN469-S Chr10 2235203 2235211 0 0 Deletion 8 FN469-S Chr12 20867459 20867467 0 0 Deletion 8 FN469-S Chr10 14706577 14706582 0 0 Deletion 5 FN469-S Chr2 724801 724803 0 0 Deletion 2 FN469-S Chr2 8325808 8325809 0 0 Deletion 1 FN469-S Chr3 32554105 32554106 0 0 Deletion 1 FN469-S Chr12 1368168 1368169 0 0 Deletion 1 FN469-S Chr1 11251837 11251838 0 0 Deletion 1 FN469-S Chr6 6017327 6017328 0 0 Deletion 1 FN469-S Chr5 15601948 15601951 0 0 Deletion 3 FN469-S Chr7 9393896 9393901 0 0 Deletion 5 FN469-S Chr1 10125003 10125009 0 0 Deletion 6 FN469-S Chr7 9602462 9602484 0 0 Deletion 22 FN469-S Chr4 11079865 11079899 0 0 Deletion 34 FN469-S Chr7 19635550 19638945 0 0 Deletion 3395 FN469-S Chr2 1537019 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN469-S Chr2 2513660 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN469-S Chr2 17662172 A-G 0 0 Single Base Substitution 0 INTRON HET FN469-S Chr3 2316408 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN469-S Chr3 9863238 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN469-S Chr4 4458364 T-G 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN469-S Chr4 9509337 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN469-S Chr4 10875685 C-A 0 0 Single Base Substitution 0 INTRON HOMO FN469-S Chr4 33511122 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN469-S Chr5 681710 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN469-S Chr5 12913823 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN469-S Chr6 8559051 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g15100 retrotransposon protein, putative, Ty3-gypsy subclass FN469-S Chr6 15066808 A-G 0 0 Single Base Substitution 0 INTRON HET FN469-S Chr7 178026 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN469-S Chr7 1065828 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN469-S Chr7 20621160 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN469-S Chr7 25218696 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN469-S Chr8 1031384 A-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN469-S Chr8 22283208 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN469-S Chr8 23954331 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN469-S Chr8 27825995 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os08g44200 ECT5, putative, expressed FN469-S Chr9 2182220 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN469-S Chr9 7333019 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN469-S Chr9 12081052 T-C 0 0 Single Base Substitution 0 INTRON HET FN469-S Chr10 2226329 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN469-S Chr11 14337503 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN469-S Chr11 14692782 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g25760 expressed protein FN469-S Chr11 20562606 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN469-S Chr11 20881669 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN469-S Chr12 9836139 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN469-S Chr12 24242495 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN469-S Chr4 30718755 30718755 0 0 Insertion 2 FN469-S Chr8 4309379 4309379 0 0 Insertion 33 FN469-S Chr3 24164437 24164437 0 0 Insertion 1 FN469-S Chr1 21788968 23038166 0 0 Inversion 1249198 LOC_Os01g38840 TKL_IRAK_DUF26-le.1 - DUF26 kinases have homology to DUF26 containing loci, expressed FN469-S Chr1 21788980 23038166 0 0 Inversion 1249186 LOC_Os01g38840 TKL_IRAK_DUF26-le.1 - DUF26 kinases have homology to DUF26 containing loci, expressed FN469-S Chr3 131005 13121878 0 0 Inversion 12990873 LOC_Os03g01200 SNF2 family N-terminal domain containing protein, expressed FN469-S Chr6 7380411 12070352 0 0 Inversion 4689941 LOC_Os06g13420 OsSCP34 - Putative Serine Carboxypeptidase homologue, expressed FN469-S Chr9 12038246 12585799 0 0 Inversion 547553 LOC_Os09g20910 expressed protein FN469-S Chr10 10948770 Chr4 2115410 0 Translocation 0 FN469-S Chr12 19376796 Chr1 13934725 0 Translocation 0 LOC_Os01g24764 expressed protein FN469-S Chr12 24333098 Chr3 20216175 0 Translocation 0 FN469-S Chr2 35800623 Chr1 6636233 0 Translocation 0 LOC_Os02g58560 1,3-beta-glucan synthase component, putative, expressed FN469-S Chr2 35800623 Chr1 6636233 0 Translocation 0 LOC_Os01g12170 retrotransposon protein, putative, unclassified, expressed FN469-S Chr2 35805821 Chr1 6636233 0 Translocation 0 LOC_Os02g58570 PRLI-interacting factor A, putative, expressed FN469-S Chr2 35805821 Chr1 6636233 0 Translocation 0 LOC_Os01g12170 retrotransposon protein, putative, unclassified, expressed FN469-S Chr7 19635560 Chr2 941119 0 Translocation 0 LOC_Os02g02590 PPR repeat domain containing protein, putative, expressed FN469-S Chr7 19638932 Chr2 941116 0 Translocation 0 LOC_Os02g02590 PPR repeat domain containing protein, putative, expressed FN469-S Chr8 21684697 Chr2 16775465 0 Translocation 0