FN544-S Chr4 29803131 29803136 0 0 Deletion 5 LOC_Os04g49960 glycosyl transferase, group 1 domain containing protein, expressed FN544-S Chr7 25871168 25871169 0 0 Deletion 1 LOC_Os07g43160 uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed FN544-S Chr7 26853200 26853428 0 0 Deletion 228 LOC_Os07g45010 expressed protein FN544-S Chr3 32697514 32699017 0 0 Deletion 1503 LOC_Os03g57320 expp1 protein precursor, putative, expressed FN544-S Chr6 1211001 1222000 0 0 Deletion 11000 LOC_Os06g03220 expressed protein FN544-S Chr6 1211001 1222000 0 0 Deletion 11000 LOC_Os06g03230 hypothetical protein FN544-S Chr7 6462001 6608000 0 0 Deletion 146000 LOC_Os07g11680 retrotransposon protein, putative, unclassified, expressed FN544-S Chr7 6462001 6608000 0 0 Deletion 146000 LOC_Os07g11690 hypothetical protein FN544-S Chr7 6462001 6608000 0 0 Deletion 146000 LOC_Os07g11700 retrotransposon protein, putative, unclassified, expressed FN544-S Chr7 6462001 6608000 0 0 Deletion 146000 LOC_Os07g11710 expressed protein FN544-S Chr7 6462001 6608000 0 0 Deletion 146000 LOC_Os07g11720 retrotransposon protein, putative, unclassified, expressed FN544-S Chr7 6462001 6608000 0 0 Deletion 146000 LOC_Os07g11739 cytochrome P450, putative, expressed FN544-S Chr7 6462001 6608000 0 0 Deletion 146000 LOC_Os07g11770 expressed protein FN544-S Chr7 6462001 6608000 0 0 Deletion 146000 LOC_Os07g11780 transposon protein, putative, CACTA, En/Spm sub-class FN544-S Chr7 6462001 6608000 0 0 Deletion 146000 LOC_Os07g11790 terpene synthase, putative, expressed FN544-S Chr7 6462001 6608000 0 0 Deletion 146000 LOC_Os07g11800 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN544-S Chr7 6462001 6608000 0 0 Deletion 146000 LOC_Os07g11810 retrotransposon protein, putative, Ty3-gypsy subclass FN544-S Chr7 6462001 6608000 0 0 Deletion 146000 LOC_Os07g11820 transposon protein, putative, CACTA, En/Spm sub-class FN544-S Chr7 6462001 6608000 0 0 Deletion 146000 LOC_Os07g11830 transposon protein, putative, CACTA, En/Spm sub-class FN544-S Chr7 6462001 6608000 0 0 Deletion 146000 LOC_Os07g11840 transposon protein, putative, CACTA, En/Spm sub-class FN544-S Chr7 6462001 6608000 0 0 Deletion 146000 LOC_Os07g11850 transposon protein, putative, CACTA, En/Spm sub-class FN544-S Chr7 6462001 6608000 0 0 Deletion 146000 LOC_Os07g11860 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN544-S Chr7 6462001 6608000 0 0 Deletion 146000 LOC_Os07g11870 cytochrome P450, putative, expressed FN544-S Chr7 6462001 6608000 0 0 Deletion 146000 LOC_Os07g11890 cytochrome P450, putative, expressed FN544-S Chr3 26631960 26631974 0 0 Deletion 14 FN544-S Chr9 11199581 11199589 0 0 Deletion 8 FN544-S Chr11 8670761 8670768 0 0 Deletion 7 FN544-S Chr5 22740392 22740396 0 0 Deletion 4 FN544-S Chr2 3270206 3270208 0 0 Deletion 2 FN544-S Chr1 26942454 26942455 0 0 Deletion 1 FN544-S Chr1 38710834 38710835 0 0 Deletion 1 FN544-S Chr7 9459452 9459453 0 0 Deletion 1 FN544-S Chr4 6732238 6732243 0 0 Deletion 5 FN544-S Chr6 5274923 5274928 0 0 Deletion 5 FN544-S Chr1 15053182 15053189 0 0 Deletion 7 FN544-S Chr1 38078620 38078629 0 0 Deletion 9 FN544-S Chr1 6836552 6836562 0 0 Deletion 10 FN544-S Chr10 9807053 9807063 0 0 Deletion 10 FN544-S Chr3 5581595 5581605 0 0 Deletion 10 FN544-S Chr1 4733688 4733699 0 0 Deletion 11 FN544-S Chr2 10502022 10502034 0 0 Deletion 12 FN544-S Chr10 22157974 22157987 0 0 Deletion 13 FN544-S Chr10 9067102 9067119 0 0 Deletion 17 FN544-S Chr2 34723420 34723469 0 0 Deletion 49 FN544-S Chr12 14070885 14070961 0 0 Deletion 76 FN544-S Chr1 1875880 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN544-S Chr1 4257028 G-A 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HET FN544-S Chr1 28215409 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN544-S Chr1 35196921 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN544-S Chr2 19925029 C-A 0 0 Single Base Substitution 0 INTRON HET FN544-S Chr2 31045989 A-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN544-S Chr3 1517492 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g03510 CAMK_KIN1/SNF1/Nim1_like.15 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN544-S Chr3 25068149 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN544-S Chr3 26263443 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN544-S Chr3 28668777 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN544-S Chr4 1652618 G-T 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN544-S Chr5 3040861 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN544-S Chr5 3730273 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN544-S Chr5 19337003 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g32990 expressed protein FN544-S Chr5 22279025 T-G 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN544-S Chr5 23988208 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN544-S Chr6 23794563 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g40000 retrotransposon protein, putative, unclassified, expressed FN544-S Chr7 16703368 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN544-S Chr7 16982622 A-T 0 0 Single Base Substitution 0 INTRON HET FN544-S Chr7 20385175 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN544-S Chr8 7234364 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g12290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN544-S Chr8 7234367 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g12290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN544-S Chr8 8611292 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN544-S Chr8 10418243 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN544-S Chr8 17891112 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN544-S Chr10 11060160 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN544-S Chr10 12772683 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN544-S Chr10 21493676 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN544-S Chr10 21988810 T-G 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN544-S Chr10 22162845 A-C 0 0 Single Base Substitution 0 INTRON HET FN544-S Chr11 8034011 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN544-S Chr11 26484849 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN544-S Chr6 23494583 23494583 0 0 Insertion 1 FN544-S Chr1 8394429 8394429 0 0 Insertion 1 FN544-S Chr3 11831202 11831202 0 0 Insertion 1 FN544-S Chr5 6390419 6390419 0 0 Insertion 1 FN544-S Chr6 31031263 31031263 0 0 Insertion 1 FN544-S Chr7 3151027 4515145 0 0 Inversion 1364118 LOC_Os07g06490 DNA binding protein, putative, expressed FN544-S Chr7 29473094 29480690 0 0 Inversion 7596 LOC_Os07g49210 helicase conserved C-terminal domain containing protein, expressed FN544-S Chr7 29473094 29480690 0 0 Inversion 7596 LOC_Os07g49230 ubiquitin-activating enzyme, putative, expressed FN544-S Chr11 26482661 Chr7 20170386 0 Translocation 0 FN544-S Chr11 26485024 Chr7 20170385 0 Translocation 0 FN544-S Chr12 5686038 Chr7 6608181 0 Translocation 0 LOC_Os12g10640 uncharacterized protein ycf45, putative, expressed FN544-S Chr12 5686047 Chr7 6613544 0 Translocation 0 LOC_Os12g10640 uncharacterized protein ycf45, putative, expressed FN544-S Chr12 5686047 Chr7 6613544 0 Translocation 0 LOC_Os07g11920 PROLM22 - Prolamin precursor, expressed FN544-S Chr4 11225421 Chr3 25765575 0 Translocation 0 FN544-S Chr8 10989334 Chr7 12645410 0 Translocation 0 LOC_Os08g17910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN544-S Chr8 10989334 Chr7 12645410 0 Translocation 0 LOC_Os07g22480 retrotransposon, putative, centromere-specific, expressed