FN917-S Chr3 15856646 15856650 0 0 Deletion 4 LOC_Os03g27670 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN917-S Chr4 30353423 30353427 0 0 Deletion 4 LOC_Os04g51230 retrotransposon protein, putative, unclassified, expressed FN917-S Chr4 23079654 23079657 0 0 Deletion 3 LOC_Os04g38810 formin, putative, expressed FN917-S Chr6 25819054 25819055 0 0 Deletion 1 LOC_Os06g42980 retrotransposon protein, putative, unclassified, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04060 major facilitator superfamily antiporter, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04070 60S acidic ribosomal protein P0, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04080 transposon protein, putative, unclassified FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04090 conserved hypothetical protein FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04104 major facilitator superfamily antiporter, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04120 hypothetical protein FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04130 nodulin MtN21 family protein, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04140 nodulin, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04150 major facilitator superfamily antiporter, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04160 dehydrogenase-phosphopantetheinyltransferase, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04170 CAMK_CAMK_like.42 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04174 expressed protein FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04180 dual specificity protein phosphatase, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04190 auxin efflux carrier component, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04200 M phase phosphoprotein 10, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04210 hydroxymethylglutaryl-CoA lyase, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04220 HEAT repeat family protein, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04230 transcription initiation factor, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04240 TFIIE-alpha 2, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04280 zinc finger, C3HC4 type domain containing protein FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04270 expressed protein FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04267 expressed protein FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04260 expressed protein FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04274 expressed protein FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04281 zinc finger, C3HC4 type domain containing protein FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04290 cytochrome P450, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04295 pentatricopeptide repeat domain containing protein, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04300 retrotransposon protein, putative, unclassified, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04310 cytochrome P450, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04320 phosphoglycerate mutase, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04330 OsFBK24 - F-box domain and kelch repeat containing protein, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04340 expressed protein FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04350 cell death associated protein, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04360 alpha/beta hydrolase fold, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04370 ribosomal protein L24, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04380 domain of unknown function, DUF250 domain containing protein, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04390 RNA recognition motif containing protein, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04400 GRAS family transcription factor containing protein, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04409 expressed protein FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04420 AIG2-like family domain containing protein, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04440 expressed protein FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04450 expressed protein FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04460 calcium-transporting ATPase, plasma membrane-type, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04470 expressed protein FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04480 peflin, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04490 astaxanthin synthase KC28, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04500 cytochrome c-type biogenesis protein dbsD-like, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04510 expressed protein FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04520 PP2A regulatory subunit TAP46, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04530 sulfotransferase domain containing protein, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04540 sulfotransferase domain containing protein, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04550 sulfotransferase domain containing protein, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04560 calmodulin-like protein 1, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04570 GRAS family transcription factor containing protein, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04580 long cell-linked locus protein, putative, expressed FN917-S Chr11 1641256 1947557 0 0 Deletion 306301 LOC_Os11g04590 GRAS family transcription factor containing protein, expressed FN917-S Chr4 10758001 10803000 0 0 Deletion 45000 LOC_Os04g19340 retrotransposon protein, putative, unclassified, expressed FN917-S Chr4 10758001 10803000 0 0 Deletion 45000 LOC_Os04g19350 retrotransposon protein, putative, Ty3-gypsy subclass FN917-S Chr4 10758001 10803000 0 0 Deletion 45000 LOC_Os04g19360 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN917-S Chr4 10758001 10803000 0 0 Deletion 45000 LOC_Os04g19370 hypothetical protein FN917-S Chr4 10758001 10803000 0 0 Deletion 45000 LOC_Os04g19380 retrotransposon protein, putative, Ty1-copia subclass, expressed FN917-S Chr8 86001 117000 0 0 Deletion 31000 LOC_Os08g01120 sulfate transporter, putative, expressed FN917-S Chr8 86001 117000 0 0 Deletion 31000 LOC_Os08g01130 flap endonuclease, putative, expressed FN917-S Chr8 86001 117000 0 0 Deletion 31000 LOC_Os08g01140 cytochrome b561, putative, expressed FN917-S Chr8 86001 117000 0 0 Deletion 31000 LOC_Os08g01150 DTA2, putative, expressed FN917-S Chr8 86001 117000 0 0 Deletion 31000 LOC_Os08g01160 membrane associated DUF588 domain containing protein, putative, expressed FN917-S Chr8 86001 117000 0 0 Deletion 31000 LOC_Os08g01170 acetyltransferase, GNAT family, putative, expressed FN917-S Chr8 86001 117000 0 0 Deletion 31000 LOC_Os08g01180 nicalin, putative, expressed FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g24920 retrotransposon, putative, centromere-specific, expressed FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g24930 retrotransposon protein, putative, Ty3-gypsy subclass FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g24940 retrotransposon protein, putative, unclassified FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g24950 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g24960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g24970 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g24980 expressed protein FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g24990 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g25000 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g25010 transposon protein, putative, CACTA, En/Spm sub-class FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g25020 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g25030 hypothetical protein FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g25040 retrotransposon protein, putative, unclassified, expressed FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g25050 retrotransposon protein, putative, unclassified, expressed FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g25070 retrotransposon protein, putative, unclassified, expressed FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g25080 retrotransposon protein, putative, Ty1-copia subclass, expressed FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g25090 expressed protein FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g25100 retrotransposon protein, putative, Ty1-copia subclass, expressed FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g25110 expressed protein FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g25120 core histone H2A/H2B/H3/H4, putative, expressed FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g25130 CRP8 - Cysteine-rich family protein precursor, expressed FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g25140 hypothetical protein FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g25150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g25160 MATE, putative, expressed FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g25170 NB-ARC domain containing disease resistance protein, putative, expressed FN917-S Chr12 14312001 14460000 0 0 Deletion 148000 LOC_Os12g25180 expressed protein FN917-S Chr1 19010957 19010969 0 0 Deletion 12 FN917-S Chr6 21416929 21416937 0 0 Deletion 8 FN917-S Chr2 29580575 29580580 0 0 Deletion 5 FN917-S Chr12 969072 969077 0 0 Deletion 5 FN917-S Chr4 27502951 27502954 0 0 Deletion 3 FN917-S Chr4 26428130 26428132 0 0 Deletion 2 FN917-S Chr3 4716929 4716930 0 0 Deletion 1 FN917-S Chr11 23239508 23239509 0 0 Deletion 1 FN917-S Chr12 9630495 9630496 0 0 Deletion 1 FN917-S Chr6 21880405 21880406 0 0 Deletion 1 FN917-S Chr6 21962018 21962019 0 0 Deletion 1 FN917-S Chr4 27215309 27215316 0 0 Deletion 7 FN917-S Chr3 7362046 7362058 0 0 Deletion 12 FN917-S Chr6 23278045 23278059 0 0 Deletion 14 FN917-S Chr11 11195453 11195575 0 0 Deletion 122 FN917-S Chr1 288823 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN917-S Chr1 18535320 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN917-S Chr1 35933017 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN917-S Chr2 35433687 A-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN917-S Chr3 9811880 C-A 0 0 Single Base Substitution 0 INTRON HET FN917-S Chr3 14869221 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN917-S Chr3 15510037 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN917-S Chr3 17384499 T-G 0 0 Single Base Substitution 0 INTRON HET FN917-S Chr3 22079660 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN917-S Chr4 1589023 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN917-S Chr4 7654368 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN917-S Chr4 15345080 G-A 0 0 Single Base Substitution 0 INTRON HET FN917-S Chr4 15345081 A-T 0 0 Single Base Substitution 0 INTRON HET FN917-S Chr5 6598011 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN917-S Chr5 11840210 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN917-S Chr5 19801285 A-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN917-S Chr5 26453390 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g45640 retrotransposon protein, putative, unclassified, expressed FN917-S Chr5 27144275 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g46900 expressed protein FN917-S Chr6 14860784 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g25370 retrotransposon protein, putative, unclassified FN917-S Chr7 3568292 A-T 0 0 Single Base Substitution 0 INTRON HOMO FN917-S Chr7 7746761 T-C 0 0 Single Base Substitution 0 UTR_5_PRIME HOMO FN917-S Chr7 12739422 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN917-S Chr7 14085548 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN917-S Chr8 10558556 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN917-S Chr8 17770375 C-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN917-S Chr12 1551349 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN917-S Chr12 1762374 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN917-S Chr12 10667817 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN917-S Chr12 17123819 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN917-S Chr12 19142005 A-C 0 0 Single Base Substitution 0 INTRON HET FN917-S Chr3 9774417 9774417 0 0 Insertion 1 FN917-S Chr5 7539812 7539812 0 0 Insertion 1 FN917-S Chr6 2984989 2984989 0 0 Insertion 1 FN917-S Chr5 28124716 28124716 0 0 Insertion 2 LOC_Os05g49040 expressed protein FN917-S Chr6 28300445 28300445 0 0 Insertion 4 FN917-S Chr3 16732248 16732248 0 0 Insertion 2 FN917-S Chr9 14985480 14985480 0 0 Insertion 2 FN917-S Chr10 5461517 5461517 0 0 Insertion 1 FN917-S Chr10 19725372 19725372 0 0 Insertion 1 FN917-S Chr7 27802065 27802065 0 0 Insertion 1 FN917-S Chr8 8657538 8657538 0 0 Insertion 1 FN917-S Chr9 21101878 21155279 0 0 Inversion 53401 FN917-S Chr9 21101890 21155300 0 0 Inversion 53410 FN917-S Chr11 1662714 Chr2 21538755 0 Translocation 0 LOC_Os11g04104 major facilitator superfamily antiporter, putative, expressed FN917-S Chr11 11195454 Chr3 22327938 0 Translocation 0 LOC_Os11g19450 expressed protein FN917-S Chr12 10251652 Chr2 19206815 0 Translocation 0 FN917-S Chr12 11634625 Chr8 85566 0 Translocation 0 LOC_Os12g19980 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN917-S Chr12 11634647 Chr1 23581241 0 Translocation 0 LOC_Os12g19980 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN917-S Chr12 11634647 Chr1 23581241 0 Translocation 0 LOC_Os01g41650 pentatricopeptide, putative, expressed FN917-S Chr4 10802995 Chr3 22511201 0 Translocation 0 FN917-S Chr8 83831 Chr2 3079942 0 Translocation 0 LOC_Os08g01110 expressed protein FN917-S Chr8 117136 Chr3 22510954 0 Translocation 0 LOC_Os08g01180 nicalin, putative, expressed FN917-S Chr8 117137 Chr4 10802995 0 Translocation 0 LOC_Os08g01180 nicalin, putative, expressed FN917-S Chr8 120818 Chr4 10758148 0 Translocation 0 LOC_Os08g01180 nicalin, putative, expressed FN917-S Chr8 16361308 Chr4 18302301 0 Translocation 0