FN-40 Chr1 25488145 25488146 0 0 Deletion 1 INTRON Homo FN-40 Chr1 34207319 34207320 0 0 Deletion 1 SPLICE_SITE_REGION Homo FN-40 Chr2 5832631 5832654 0 0 Deletion 23 INTERGENIC Hetero FN-40 Chr2 19038324 19038327 0 0 Deletion 3 INTERGENIC Homo FN-40 Chr2 32663360 32663362 0 0 Deletion 2 INTRON Homo FN-40 Chr3 23772817 23772819 0 0 Deletion 2 INTERGENIC Hetero FN-40 Chr8 10462622 10462623 0 0 Deletion 1 INTERGENIC Hetero FN-40 Chr1 7280784 7280784 0 0 Insertion 4 INTERGENIC Hetero FN-40 Chr1 32299490 32299490 0 0 Insertion 2 INTERGENIC Hetero FN-40 Chr1 11352445 11352569 0 0 Deletion 124 Hetero 0 FN-40 Chr2 10424428 10424429 0 0 Deletion 1 Hetero 0 FN-40 Chr3 20040046 20040356 0 0 Deletion 310 Hetero 0 FN-40 Chr6 10242391 10242393 0 0 Deletion 2 Hetero 0 FN-40 Chr6 13898080 13898262 0 0 Deletion 182 Hetero 0 FN-40 Chr8 28266007 28266008 0 0 Deletion 1 Hetero 0 FN-40 Chr3 25442227 25442227 0 0 Insertion 1 Hetero OsKitaake03g268500 IF1C_ORYSJ Translation initiation factor IF-1, chloroplastic OS=Oryza sativa subsp. japonica GN=infA FN-40 Chr4 2728023 2728023 0 0 Insertion 2 Hetero 0 FN-40 Chr4 18345247 18345247 0 0 Insertion 2 Hetero 0 FN-40 Chr5 12965974 12965974 0 0 Insertion 1 Hetero OsKitaake05g100400 YCF68_ORYSJ Uncharacterized protein ycf68 OS=Oryza sativa subsp. japonica GN=ycf68-1 PE=3 SV=Length= FN-40 Chr8 899762 Chr5 4076444 0 Translocation 0 Hetero FN-40 Chr8 899770 Chr7 2710817 0 Translocation 0 Hetero FN-40 Chr9 5662773 Chr7 2768626 0 Translocation 0 Hetero FN-40 Chr8 881813 1644541 0 0 Inversion 0 Homo FN-40 Chr8 899761 1639652 0 0 Inversion 0 Homo FN-40 Chr1 8482299 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN-40 Chr1 24650689 T-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN-40 Chr1 38684683 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN-40 Chr3 5559226 C-A 0 0 Single Base Substitution 0 SPLICE_SITE_REGION Homo FN-40 Chr3 28568547 A-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN-40 Chr3 32443469 A-T 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN-40 Chr4 3568417 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN-40 Chr5 4076612 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN-40 Chr5 9020466 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN-40 Chr5 30064660 G-T 0 0 Single Base Substitution 0 INTRON Hetero FN-40 Chr5 30166877 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN-40 Chr6 197853 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN-40 Chr6 10725631 T-A 0 0 Single Base Substitution 0 INTRON Homo FN-40 Chr6 20793114 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN-40 Chr6 21390373 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN-40 Chr6 26732066 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN-40 Chr6 27469149 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN-40 Chr7 3766961 G-A 0 0 Single Base Substitution 0 INTRON Hetero FN-40 Chr7 3766962 T-A 0 0 Single Base Substitution 0 INTRON Hetero FN-40 Chr7 20829055 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN-40 Chr8 9755465 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN-40 Chr8 22793311 C-T 0 0 Single Base Substitution 0 INTRON Hetero FN-40 Chr9 2948826 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN-40 Chr9 10105856 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN-40 Chr9 15725977 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN-40 Chr10 11024241 A-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN-40 Chr10 17471297 A-C 0 0 Single Base Substitution 0 INTRON Homo FN-40 Chr11 8769609 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN-40 Chr11 12805902 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN-40 Chr11 15907521 A-C 0 0 Single Base Substitution 0 INTRON Homo FN-40 Chr11 23653688 T-C 0 0 Single Base Substitution 0 INTRON Hetero FN-40 Chr11 29587828 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN-40 Chr12 5004479 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN-40 Chr12 11134910 A-C 0 0 Single Base Substitution 0 INTERGENIC Hetero