FN1050-S Chr2 20155251 20155260 0 0 Deletion 9 INTERGENIC Hetero FN1050-S Chr3 24728156 24728160 0 0 Deletion 4 INTERGENIC Hetero FN1050-S Chr5 12781131 12781132 0 0 Deletion 1 INTERGENIC Homo FN1050-S Chr5 13264727 13264735 0 0 Deletion 8 INTERGENIC Homo FN1050-S Chr6 14429051 14429053 0 0 Deletion 2 INTERGENIC Hetero FN1050-S Chr6 26118432 26118438 0 0 Deletion 6 INTERGENIC Homo FN1050-S Chr10 22261948 22261952 0 0 Deletion 4 INTERGENIC Homo FN1050-S Chr11 2511725 2511726 0 0 Deletion 1 INTERGENIC Hetero FN1050-S Chr11 12122837 12122841 0 0 Deletion 4 INTERGENIC Hetero FN1050-S Chr2 32840416 32840416 0 0 Insertion 1 INTRON Hetero FN1050-S Chr6 23533723 23533723 0 0 Insertion 1 UTR_3_PRIME Hetero FN1050-S Chr12 20146354 20146354 0 0 Insertion 1 Hetero OsKitaake12g154800 YMF19_WHEAT Putative ATP synthase protein YMF19 OS=Triticum aestivum GN=YMF19 PE=2 SV=Length=15 FN1050-S Chr3 18932727 19034611 0 0 Inversion 0 Homo FN1050-S Chr3 18937734 19033516 0 0 Inversion 0 Homo FN1050-S Chr3 20252630 21092775 0 0 Inversion 0 Homo FN1050-S Chr3 21085001 21093000 0 0 Deletion 7999 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g384800 RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=Length=92 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g384900 MT21D_HUMAN Protein-lysine methyltransferase METTL21D OS=Homo sapiens GN=VCPKMT PE=1 SV=Length=22 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g385000 PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thal FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g385100 A0A0E0NMW4_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=20 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g385200 HIP6_ARATH Heavy metal-associated isoprenylated plant protein 6 OS=Arabidopsis thaliana GN=HIPP06 PE FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g385300 Hypothetical protein FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g385400 ZDH20_ARATH Probable protein S-acyltransferase 15 OS=Arabidopsis thaliana GN=PAT15 PE=2 SV=Length=25 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g385500 TRL32_ARATH Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana GN=WCRKC2 PE=2 SV=Length=19 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g385600 PUM1_ARATH Pumilio homolog 1 OS=Arabidopsis thaliana GN=APUM1 PE=1 SV=Length=96 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g385700 LPA1_ORYSJ P-loop NTPase domain-containing protein LPA1 OS=Oryza sativa subsp. japonica GN=LPA1 PE=2 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g385800 Y4757_DICDI OTU domain-containing protein DDB_G0284757 OS=Dictyostelium discoideum GN=DDB_G0284757 P FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g385900 PBL19_ARATH Probable serine/threonine-protein kinase PBL19 OS=Arabidopsis thaliana GN=PBL19 PE=1 SV= FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g386000 DNLZ_XENLA DNL-type zinc finger protein OS=Xenopus laevis GN=dnlz PE=2 SV=Length=18 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g386100 LYK3_ARATH LysM domain receptor-like kinase 3 OS=Arabidopsis thaliana GN=LYK3 PE=2 SV=Length=65 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g386200 PP1_MAIZE Serine/threonine-protein phosphatase PP1 OS=Zea mays GN=PP1 PE=2 SV=Length=31 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g386300 ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2 SV=Length=38 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g386400 KLCR2_ARATH Protein KINESIN LIGHT CHAIN-RELATED 2 OS=Arabidopsis thaliana GN=KLCR2 PE=1 SV=Length=66 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g386500 3AT2_ARATH Coumaroyl-CoA:anthocyanidin 3-O-glucoside-6''-O-coumaroyltransferase 2 OS=Arabidopsis tha FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g386600 LBD16_ARATH LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16 PE=1 SV=Length=24 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g386700 Q6K712_ORYSJ Os02g0820600 protein OS=Oryza sativa subsp. japonica GN=Os02g0820600 PE=2 SV=Length=41 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g386800 A0A0E0NMY8_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=19 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g386900 BET11_ARATH Bet1-like SNARE 1-1 OS=Arabidopsis thaliana GN=BET11 PE=1 SV=Length=12 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g387000 AHL20_ARATH AT-hook motif nuclear-localized protein 20 OS=Arabidopsis thaliana GN=AHL20 PE=2 SV=Leng FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g387100 ETR3_ORYSJ Ethylene receptor 3 OS=Oryza sativa subsp. japonica GN=ETR3 PE=2 SV=Length=83 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g387150 A0A0E0K707_ORYPU Uncharacterized protein OS=Oryza punctata PE=4 SV=Length=13 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g387200 RL281_ARATH 60S ribosomal protein L28-1 OS=Arabidopsis thaliana GN=RPL28A PE=1 SV=Length=14 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g387300 ZFP10_ARATH Zinc finger protein 10 OS=Arabidopsis thaliana GN=ZFP10 PE=2 SV=Length=30 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g387400 CRCK2_ARATH Calmodulin-binding receptor-like cytoplasmic kinase 2 OS=Arabidopsis thaliana GN=CRCK2 P FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g387500 DTX34_ARATH Protein DETOXIFICATION 34 OS=Arabidopsis thaliana GN=DTX34 PE=2 SV=Length=54 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g387600 A0A194YL46_SORBI Uncharacterized protein OS=Sorghum bicolor GN=SORBI_3010G185900 PE=4 SV=Length=3 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g387700 MD36A_ARATH Mediator of RNA polymerase II transcription subunit 36a OS=Arabidopsis thaliana GN=MED36 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g387800 ATI1_ARATH ATG8-interacting protein 1 OS=Arabidopsis thaliana GN=ATI1 PE=1 SV=Length=25 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g387900 Y1666_ARATH Uncharacterized protein At1g76660 OS=Arabidopsis thaliana GN=At1g76660 PE=2 SV=Length=43 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g388000 LSI2_ORYSJ Silicon efflux transporter LSI2 OS=Oryza sativa subsp. japonica GN=LSI2 PE=1 SV=Length=47 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g388100 UCH2_ARATH Ubiquitin carboxyl-terminal hydrolase 2 OS=Arabidopsis thaliana GN=UCH2 PE=1 SV=Length=33 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g388200 BTR1_ARATH Protein BTR1 OS=Arabidopsis thaliana GN=BTR1 PE=1 SV=Length=31 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g388300 NAC78_ARATH NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=Length=56 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g388400 PI5K9_ARATH Phosphatidylinositol 4-phosphate 5-kinase 9 OS=Arabidopsis thaliana GN=PIP5K9 PE=1 SV=Le FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g388500 RK9_WHEAT 50S ribosomal protein L9, chloroplastic OS=Triticum aestivum GN=RPL9 PE=2 SV=Length=19 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g388600 4CLL8_ARATH 4-coumarate--CoA ligase-like 8 OS=Arabidopsis thaliana GN=4CLL8 PE=2 SV=Length=55 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g388700 ACBP4_ARATH Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana GN=ACBP4 PE=1 SV=Le FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g388600 4CLL8_ARATH 4-coumarate--CoA ligase-like 8 OS=Arabidopsis thaliana GN=4CLL8 PE=2 SV=Length=55 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g388700 ACBP4_ARATH Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana GN=ACBP4 PE=1 SV=Le FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g388800 PUB33_ARATH U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=Length=83 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g388900 SIPL4_ORYSJ Signal peptide peptidase-like 4 OS=Oryza sativa subsp. japonica GN=SPPL4 PE=2 SV=Length= FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g389000 PIP13_ORYSJ Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=Length=28 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g389100 I1P5P6_ORYGL Uncharacterized protein OS=Oryza glaberrima PE=4 SV=Length=22 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g389200 NEUR_DROVI Protein neuralized OS=Drosophila virilis GN=neur PE=4 SV=Length=74 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g389300 COMT1_MEDSA Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=Length=36 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g389400 Q6K9X2_ORYSJ Os02g0823600 protein OS=Oryza sativa subsp. japonica GN=Os02g0823600 PE=4 SV=Length=8 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g389300 COMT1_MEDSA Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=Length=36 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g389400 Q6K9X2_ORYSJ Os02g0823600 protein OS=Oryza sativa subsp. japonica GN=Os02g0823600 PE=4 SV=Length=8 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g389500 XTH32_ARATH Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g389600 SMG8_BOVIN Protein SMG8 OS=Bos taurus GN=SMG8 PE=2 SV=Length=99 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g389700 ZAT5_ARATH Zinc finger protein ZAT5 OS=Arabidopsis thaliana GN=ZAT5 PE=2 SV=Length=28 FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g389800 PP381_ARATH Pentatricopeptide repeat-containing protein At5g14770, mitochondrial OS=Arabidopsis thal FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g389900 Hypothetical protein FN1050-S Chr2 36333001 36636000 0 0 Deletion 302999 OsKitaake02g390000 C14C3_ORYSJ Cytochrome P450 714C3 OS=Oryza sativa subsp. japonica GN=CYP714C3 PE=3 SV=Length=51 FN1050-S Chr3 35865001 35893000 0 0 Deletion 27999 OsKitaake03g395000 Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana GN=At2g37660 PE FN1050-S Chr3 35865001 35893000 0 0 Deletion 27999 OsKitaake03g395100 RLME_DESAA Ribosomal RNA large subunit methyltransferase E OS=Desulfatibacillum alkenivorans (strain FN1050-S Chr3 35865001 35893000 0 0 Deletion 27999 OsKitaake03g395000 Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana GN=At2g37660 PE FN1050-S Chr3 35865001 35893000 0 0 Deletion 27999 OsKitaake03g395100 RLME_DESAA Ribosomal RNA large subunit methyltransferase E OS=Desulfatibacillum alkenivorans (strain FN1050-S Chr3 35865001 35893000 0 0 Deletion 27999 OsKitaake03g395000 Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana GN=At2g37660 PE FN1050-S Chr3 35865001 35893000 0 0 Deletion 27999 OsKitaake03g395100 RLME_DESAA Ribosomal RNA large subunit methyltransferase E OS=Desulfatibacillum alkenivorans (strain FN1050-S Chr3 35865001 35893000 0 0 Deletion 27999 OsKitaake03g395200 SMR4_ARATH Cyclin-dependent protein kinase inhibitor SMR4 OS=Arabidopsis thaliana GN=SMR4 PE=1 SV=Le FN1050-S Chr3 35865001 35893000 0 0 Deletion 27999 OsKitaake03g395300 HPBP1_MOUSE Hsp70-binding protein 1 OS=Mus musculus GN=Hspbp1 PE=1 SV=Length=35 FN1050-S Chr3 35865001 35893000 0 0 Deletion 27999 OsKitaake03g395400 DNAJ_ACAM1 Chaperone protein DnaJ OS=Acaryochloris marina (strain MBIC 11017) GN=dnaJ PE=3 SV=Length FN1050-S Chr3 35865001 35893000 0 0 Deletion 27999 OsKitaake03g395500 LRK42_ARATH L-type lectin-domain containing receptor kinase IV.2 OS=Arabidopsis thaliana GN=LECRK42 FN1050-S Chr7 24549001 24674000 0 0 Deletion 124999 OsKitaake07g218700 ULP1B_ARATH Putative ubiquitin-like-specific protease 1B OS=Arabidopsis thaliana GN=ULP1B PE=5 SV=Le FN1050-S Chr7 24549001 24674000 0 0 Deletion 124999 OsKitaake07g218900 ANR_GINBI Putative anthocyanidin reductase OS=Ginkgo biloba PE=2 SV=Length=34 FN1050-S Chr7 24549001 24674000 0 0 Deletion 124999 OsKitaake07g219000 ANR_GINBI Putative anthocyanidin reductase OS=Ginkgo biloba PE=2 SV=Length=34 FN1050-S Chr7 24549001 24674000 0 0 Deletion 124999 OsKitaake07g219100 VEP1_ARATH 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Arabidopsis thaliana GN=VEP1 PE=1 SV=Length= FN1050-S Chr7 24549001 24674000 0 0 Deletion 124999 OsKitaake07g219200 ANR_GINBI Putative anthocyanidin reductase OS=Ginkgo biloba PE=2 SV=Length=34 FN1050-S Chr7 24549001 24674000 0 0 Deletion 124999 OsKitaake07g219300 ANRPN_VITVI Anthocyanidin reductase ((2S)-flavan-3-ol-forming) OS=Vitis vinifera GN=ANR PE=3 SV=Leng FN1050-S Chr7 24549001 24674000 0 0 Deletion 124999 OsKitaake07g219400 ANR_GINBI Putative anthocyanidin reductase OS=Ginkgo biloba PE=2 SV=Length=34 FN1050-S Chr7 24549001 24674000 0 0 Deletion 124999 OsKitaake07g219500 YUGF_BACSU Uncharacterized hydrolase YugF OS=Bacillus subtilis (strain 168) GN=yugF PE=3 SV=Length=2 FN1050-S Chr7 24549001 24674000 0 0 Deletion 124999 OsKitaake07g219600 HDA5_ARATH Histone deacetylase 5 OS=Arabidopsis thaliana GN=HDA5 PE=1 SV=Length=66 FN1050-S Chr7 24549001 24674000 0 0 Deletion 124999 OsKitaake07g219650 A0A0E0AMC6_9ORYZ Uncharacterized protein OS=Oryza glumipatula PE=4 SV=Length=49 FN1050-S Chr7 24549001 24674000 0 0 Deletion 124999 OsKitaake07g219700 RBG3_ARATH Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana GN=RBG3 PE=1 SV FN1050-S Chr1 20042850 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1050-S Chr1 27972825 A-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1050-S Chr1 31364379 G-A 0 0 Single Base Substitution 0 INTRON Hetero FN1050-S Chr3 6588150 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1050-S Chr3 17186821 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1050-S Chr3 19761936 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1050-S Chr3 26631766 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1050-S Chr3 32315267 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1050-S Chr3 32472737 A-T 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN1050-S Chr3 32472738 A-T 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN1050-S Chr3 32542449 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1050-S Chr4 13569306 A-C 0 0 Single Base Substitution 0 UTR_5_PRIME Hetero FN1050-S Chr6 6073752 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo OsKitaake06g080000 OPR2_ORYSJ Putative 12-oxophytodienoate reductase 2 OS=Oryza sativa subsp. japonica GN=OPR2 PE=3 SV= FN1050-S Chr6 12076610 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1050-S Chr6 12076616 T-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1050-S Chr6 12971181 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1050-S Chr6 23544956 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1050-S Chr6 25085403 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1050-S Chr7 302748 A-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1050-S Chr7 3833312 T-C 0 0 Single Base Substitution 0 INTRON Hetero FN1050-S Chr7 5474996 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1050-S Chr7 5475000 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1050-S Chr7 28097248 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1050-S Chr8 526615 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1050-S Chr8 540023 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake08g007700 RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=Length=79 FN1050-S Chr8 26046303 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1050-S Chr10 10868708 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1050-S Chr11 14179428 C-A 0 0 Single Base Substitution 0 INTRON Hetero FN1050-S Chr11 18473562 A-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1050-S Chr11 20452218 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1050-S Chr11 22592220 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1050-S Chr12 2268562 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1050-S Chr12 13929244 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1050-S Chr12 14779661 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero