FN1239-S Chr1 20212196 20212203 0 0 Deletion 7 INTERGENIC Homo FN1239-S Chr1 28577527 28577531 0 0 Deletion 4 INTRON Hetero FN1239-S Chr1 32799414 32799423 0 0 Deletion 9 INTERGENIC Hetero FN1239-S Chr1 41616236 41616237 0 0 Deletion 1 FRAME_SHIFT Homo OsKitaake01g454500 NAC83_ARATH NAC domain-containing protein 83 OS=Arabidopsis thaliana GN=NAC083 PE=1 SV=Length=25 FN1239-S Chr2 16469171 16469183 0 0 Deletion 12 INTRON Homo FN1239-S Chr2 29670107 29670110 0 0 Deletion 3 INTERGENIC Hetero FN1239-S Chr3 17199948 17199949 0 0 Deletion 1 INTRON Hetero FN1239-S Chr3 28944102 28944104 0 0 Deletion 2 INTERGENIC Hetero FN1239-S Chr4 7573217 7573222 0 0 Deletion 5 INTERGENIC Homo FN1239-S Chr5 27290368 27290371 0 0 Deletion 3 INTRON Homo FN1239-S Chr7 2855114 2855120 0 0 Deletion 6 INTERGENIC Homo FN1239-S Chr8 8654386 8654390 0 0 Deletion 4 INTRON Hetero FN1239-S Chr8 27506374 27506376 0 0 Deletion 2 INTERGENIC Homo FN1239-S Chr2 24166984 24166984 0 0 Insertion 2 INTRON Hetero FN1239-S Chr5 351770 351770 0 0 Insertion 2 INTERGENIC Hetero FN1239-S Chr5 6785620 6785620 0 0 Insertion 2 INTRON Hetero FN1239-S Chr8 4536471 4536471 0 0 Insertion 2 INTERGENIC Hetero FN1239-S Chr4 8345709 8345776 0 0 Deletion 67 Hetero 0 FN1239-S Chr9 563145 563212 0 0 Deletion 67 Hetero 0 FN1239-S Chr5 1403710 Chr3 15238985 0 Translocation 0 Homo OsKitaake05g017400 ICR2_ARATH Interactor of constitutive active ROPs 2, chloroplastic OS=Arabidopsis thaliana GN=ICR2 P FN1239-S Chr5 1403719 Chr3 15238970 0 Translocation 0 Homo OsKitaake05g017400 ICR2_ARATH Interactor of constitutive active ROPs 2, chloroplastic OS=Arabidopsis thaliana GN=ICR2 P FN1239-S Chr5 10058640 Chr3 14300868 0 Translocation 0 Homo OsKitaake05g089900 Y1561_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thal FN1239-S Chr5 10058646 Chr3 14300879 0 Translocation 0 Homo OsKitaake05g089900 Y1561_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thal FN1239-S Chr5 10058640 Chr3 14300868 0 Translocation 0 Homo OsKitaake03g186500 Q10L20_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g24730 PE=4 SV=Length=85 FN1239-S Chr5 10058646 Chr3 14300879 0 Translocation 0 Homo OsKitaake03g186500 Q10L20_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g24730 PE=4 SV=Length=85 FN1239-S Chr12 1295077 Chr4 20873564 0 Translocation 0 Hetero OsKitaake04g113800 SNF4_ARATH Sucrose nonfermenting 4-like protein OS=Arabidopsis thaliana GN=SNF4 PE=1 SV=Length=48 FN1239-S Chr12 1295086 Chr4 20874221 0 Translocation 0 Hetero OsKitaake04g113800 SNF4_ARATH Sucrose nonfermenting 4-like protein OS=Arabidopsis thaliana GN=SNF4 PE=1 SV=Length=48 FN1239-S Chr8 2097315 2531776 0 0 Inversion 0 Hetero OsKitaake08g024600 UCC1_ARATH Uclacyanin 1 OS=Arabidopsis thaliana GN=UCC1 PE=1 SV=Length=26 FN1239-S Chr1 19734234 19740643 0 0 Inversion 0 Homo FN1239-S Chr1 19734238 19740646 0 0 Inversion 0 Homo FN1239-S Chr8 2299117 2531772 0 0 Inversion 0 Hetero FN1239-S Chr11 6564241 7205381 0 0 Inversion 0 Hetero FN1239-S Chr11 6564244 7205388 0 0 Inversion 0 Hetero FN1239-S Chr11 10705001 10714000 0 0 Deletion 8999 FN1239-S Chr7 12644001 12666000 0 0 Deletion 21999 OsKitaake07g112801 FBL54_ARATH Putative F-box/LRR-repeat protein At3g49150 OS=Arabidopsis thaliana GN=At3g49150 PE=4 SV FN1239-S Chr7 12644001 12666000 0 0 Deletion 21999 OsKitaake07g112700 Q8H300_ORYSJ Putative uncharacterized protein P0710F09.130 OS=Oryza sativa subsp. japonica GN=P0710F FN1239-S Chr7 12644001 12666000 0 0 Deletion 21999 OsKitaake07g112801 FBL54_ARATH Putative F-box/LRR-repeat protein At3g49150 OS=Arabidopsis thaliana GN=At3g49150 PE=4 SV FN1239-S Chr11 762001 782000 0 0 Deletion 19999 OsKitaake11g009500 MAN7_ORYSJ Mannan endo-1,4-beta-mannosidase 7 OS=Oryza sativa subsp. japonica GN=MAN7 PE=2 SV=Length FN1239-S Chr11 762001 782000 0 0 Deletion 19999 OsKitaake11g009600 RPT2_ARATH Root phototropism protein 2 OS=Arabidopsis thaliana GN=RPT2 PE=1 SV=Length=59 FN1239-S Chr11 762001 782000 0 0 Deletion 19999 OsKitaake11g009700 Y3857_ARATH BTB/POZ domain-containing protein At3g08570 OS=Arabidopsis thaliana GN=At3g08570 PE=2 SV FN1239-S Chr11 762001 782000 0 0 Deletion 19999 OsKitaake11g009800 A0A0P0Y6D1_ORYSJ Os12g0117666 protein OS=Oryza sativa subsp. japonica GN=Os12g0117666 PE=4 SV=Length FN1239-S Chr11 762001 782000 0 0 Deletion 19999 OsKitaake11g009900 A0A0E0RCY9_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=31 FN1239-S Chr1 11949537 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1239-S Chr1 37269518 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1239-S Chr2 31405883 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1239-S Chr3 1942136 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1239-S Chr3 14477570 G-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1239-S Chr3 33105359 A-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1239-S Chr4 2098228 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1239-S Chr4 21880500 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1239-S Chr4 27331989 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1239-S Chr4 34165605 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1239-S Chr5 6849696 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1239-S Chr5 18682290 G-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1239-S Chr6 12571044 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo OsKitaake06g134200 Y2474_ARATH BTB/POZ domain-containing protein At2g04740 OS=Arabidopsis thaliana GN=At2g04740 PE=2 SV FN1239-S Chr6 21282240 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1239-S Chr6 26620129 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1239-S Chr7 18864556 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1239-S Chr7 20463604 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1239-S Chr7 21796723 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1239-S Chr8 11199916 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1239-S Chr8 11417190 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1239-S Chr9 11901142 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1239-S Chr9 19495406 C-T 0 0 Single Base Substitution 0 INTRON Hetero FN1239-S Chr10 8030434 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1239-S Chr10 13974423 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1239-S Chr10 16430961 C-T 0 0 Single Base Substitution 0 INTRON Hetero FN1239-S Chr11 16856469 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1239-S Chr11 18599030 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1239-S Chr11 25889226 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1239-S Chr12 1071682 A-T 0 0 Single Base Substitution 0 INTRON Hetero FN1239-S Chr12 1370163 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1239-S Chr12 21613267 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1239-S Chr12 23122923 A-T 0 0 Single Base Substitution 0 INTRON Homo