FN1399-S Chr1 5850140 5850155 0 0 Deletion 15 CODON_CHANGE_PLUS_CODON_DELETION Hetero FN1399-S Chr1 24481688 24481689 0 0 Deletion 1 INTERGENIC Hetero FN1399-S Chr3 26634863 26634865 0 0 Deletion 2 INTERGENIC Hetero FN1399-S Chr5 19222822 19222824 0 0 Deletion 2 INTERGENIC Hetero FN1399-S Chr6 7423874 7423875 0 0 Deletion 1 FRAME_SHIFT Homo OsKitaake06g096100 BURP9_ORYSJ BURP domain-containing protein 9 OS=Oryza sativa subsp. japonica GN=BURP9 PE=2 SV=Length FN1399-S Chr6 21327643 21327644 0 0 Deletion 1 UTR_3_PRIME Hetero FN1399-S Chr8 6002673 6002675 0 0 Deletion 2 INTERGENIC Hetero FN1399-S Chr9 15244464 15244467 0 0 Deletion 3 INTERGENIC Hetero FN1399-S Chr10 11144754 11144755 0 0 Deletion 1 INTERGENIC Hetero FN1399-S Chr10 19540056 19540066 0 0 Deletion 10 INTERGENIC Homo FN1399-S Chr11 5272529 5272531 0 0 Deletion 2 INTERGENIC Hetero FN1399-S Chr11 18036580 18036581 0 0 Deletion 1 INTRON Hetero FN1399-S Chr1 36723632 36723632 0 0 Insertion 2 INTRON Hetero FN1399-S Chr3 15611129 15611129 0 0 Insertion 2 INTERGENIC Hetero FN1399-S Chr11 6905896 6905897 0 0 Deletion 1 Hetero OsKitaake11g079910 ALA2_ARATH Phospholipid-transporting ATPase 2 OS=Arabidopsis thaliana GN=ALA2 PE=1 SV=Length=110 FN1399-S Chr12 11661870 11661870 0 0 Insertion 1 Hetero 0 FN1399-S Chr12 20083289 20083289 0 0 Insertion 1 Hetero OsKitaake12g149751 A0A0E0HCG7_ORYNI Uncharacterized protein OS=Oryza nivara PE=4 SV=Length=18 FN1399-S Chr3 24895386 25796492 0 0 Inversion 0 Hetero OsKitaake03g272000 A0A0E0GR11_ORYNI Uncharacterized protein OS=Oryza nivara PE=4 SV=Length=67 FN1399-S Chr3 24895408 25796510 0 0 Inversion 0 Hetero OsKitaake03g272000 A0A0E0GR11_ORYNI Uncharacterized protein OS=Oryza nivara PE=4 SV=Length=67 FN1399-S Chr5 13640015 13642602 0 0 Inversion 0 Hetero FN1399-S Chr1 17263001 17275000 0 0 Deletion 11999 FN1399-S Chr2 24409001 24431000 0 0 Deletion 21999 FN1399-S Chr3 20274001 20284000 0 0 Deletion 9999 FN1399-S Chr4 2451001 2469000 0 0 Deletion 17999 FN1399-S Chr7 1789001 1801000 0 0 Deletion 11999 FN1399-S Chr7 2644001 2656000 0 0 Deletion 11999 FN1399-S Chr7 4738001 4754000 0 0 Deletion 15999 FN1399-S Chr9 3719001 3734000 0 0 Deletion 14999 FN1399-S Chr9 14993001 15004000 0 0 Deletion 10999 FN1399-S Chr9 16966001 16976000 0 0 Deletion 9999 FN1399-S Chr1 3646001 3665000 0 0 Deletion 18999 OsKitaake01g049000 RST1_ARATH Protein RST1 OS=Arabidopsis thaliana GN=RST1 PE=2 SV=Length=184 FN1399-S Chr1 4468001 4481000 0 0 Deletion 12999 OsKitaake01g059500 Y8328_DICDI Protein DDB_G0268328 OS=Dictyostelium discoideum GN=DDB_G0268328 PE=4 SV=Length=377 FN1399-S Chr1 9373001 9388000 0 0 Deletion 14999 OsKitaake01g120200 GYRB_ORYSJ DNA gyrase subunit B, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=GYRB FN1399-S Chr1 16663001 16685000 0 0 Deletion 21999 OsKitaake01g177400 PIEZO_ARATH Piezo-type mechanosensitive ion channel homolog OS=Arabidopsis thaliana GN=At2g48060/At2 FN1399-S Chr1 25996001 26007000 0 0 Deletion 10999 OsKitaake01g252800 B8ATE8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_17170 PE=4 SV=Len FN1399-S Chr1 33451001 33475000 0 0 Deletion 23999 OsKitaake01g342500 MON2_DROME Protein MON2 homolog OS=Drosophila melanogaster GN=mon2 PE=2 SV=Length=168 FN1399-S Chr1 41462001 41485000 0 0 Deletion 22999 OsKitaake01g452800 DJB12_MOUSE DnaJ homolog subfamily B member 12 OS=Mus musculus GN=Dnajb12 PE=1 SV=Length=37 FN1399-S Chr2 595001 610000 0 0 Deletion 14999 OsKitaake02g009000 MOM1_ARATH Helicase protein MOM1 OS=Arabidopsis thaliana GN=MOM1 PE=1 SV=Length=200 FN1399-S Chr2 3438001 3456000 0 0 Deletion 17999 OsKitaake02g050200 BCHB_ARATH BEACH domain-containing protein B OS=Arabidopsis thaliana GN=BCHB PE=4 SV=Length=260 FN1399-S Chr2 4574001 4592000 0 0 Deletion 17999 OsKitaake02g063600 CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=Length=34 FN1399-S Chr2 4574001 4592000 0 0 Deletion 17999 OsKitaake02g063650 J3LA79_ORYBR Uncharacterized protein OS=Oryza brachyantha PE=4 SV=Length=5 FN1399-S Chr2 4574001 4592000 0 0 Deletion 17999 OsKitaake02g063700 A0A0E0G2K6_ORYNI Uncharacterized protein OS=Oryza nivara PE=4 SV=Length=11 FN1399-S Chr2 5086001 5109000 0 0 Deletion 22999 OsKitaake02g070500 MDR_ORYSJ Putative multidrug resistance protein OS=Oryza sativa subsp. japonica GN=Os02g0190300 PE=3 FN1399-S Chr2 5801001 5824000 0 0 Deletion 22999 OsKitaake02g080100 NU205_ARATH Nuclear pore complex protein NUP205 OS=Arabidopsis thaliana GN=NUP205 PE=1 SV=Length=183 FN1399-S Chr2 8388001 8399000 0 0 Deletion 10999 OsKitaake02g106600 CALS8_ARATH Putative callose synthase 8 OS=Arabidopsis thaliana GN=CALS8 PE=3 SV=Length=197 FN1399-S Chr2 12746001 12763000 0 0 Deletion 16999 OsKitaake02g142400 Q6Z849_ORYSJ Os02g0316900 protein OS=Oryza sativa subsp. japonica GN=P0572D06.30-1 PE=4 SV=Length=58 FN1399-S Chr2 12746001 12763000 0 0 Deletion 16999 OsKitaake02g142500 C7IY45_ORYSJ Os02g0316900 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os02g0316900 PE=4 SV FN1399-S Chr2 12746001 12763000 0 0 Deletion 16999 OsKitaake02g142600 A0A0D9YR65_9ORYZ Uncharacterized protein OS=Oryza glumipatula PE=4 SV=Length=148 FN1399-S Chr2 12746001 12763000 0 0 Deletion 16999 OsKitaake02g142650 B9F5A7_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_06447 PE=4 SV=Length=55 FN1399-S Chr2 12837001 12850000 0 0 Deletion 12999 OsKitaake02g143900 AB40G_ORYSJ ABC transporter G family member 40 OS=Oryza sativa subsp. japonica GN=ABCG40 PE=3 SV=Len FN1399-S Chr2 16069001 16094000 0 0 Deletion 24999 OsKitaake02g166300 VP13A_DICDI Putative vacuolar protein sorting-associated protein 13A OS=Dictyostelium discoideum GN= FN1399-S Chr2 16307001 16320000 0 0 Deletion 12999 OsKitaake02g167700 TOP1_RICBR DNA topoisomerase 1 OS=Rickettsia bellii (strain RML369-C) GN=topA PE=3 SV=Length=80 FN1399-S Chr2 17541001 17558000 0 0 Deletion 16999 OsKitaake02g176100 DME_ARATH Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME PE=1 SV=Length=198 FN1399-S Chr2 18689001 18710000 0 0 Deletion 20999 OsKitaake02g184000 DPOE1_ARATH DNA polymerase epsilon catalytic subunit A OS=Arabidopsis thaliana GN=POL2A PE=1 SV=Leng FN1399-S Chr2 20765001 20793000 0 0 Deletion 27999 OsKitaake02g201300 MYO8_ARATH Myosin-8 OS=Arabidopsis thaliana GN=XI-B PE=3 SV=Length=150 FN1399-S Chr2 27605001 27619000 0 0 Deletion 13999 OsKitaake02g277500 BCHC2_ARATH BEACH domain-containing protein C2 OS=Arabidopsis thaliana GN=BCHC2 PE=1 SV=Length=300 FN1399-S Chr2 32164001 32188000 0 0 Deletion 23999 OsKitaake02g328800 MNS5_ARATH Alpha-mannosidase I MNS5 OS=Arabidopsis thaliana GN=MNS5 PE=1 SV=Length=57 FN1399-S Chr2 32164001 32188000 0 0 Deletion 23999 OsKitaake02g328900 NUA_ARATH Nuclear-pore anchor OS=Arabidopsis thaliana GN=NUA PE=1 SV=Length=209 FN1399-S Chr3 1085001 1104000 0 0 Deletion 18999 OsKitaake03g016901 CALS9_ARATH Callose synthase 9 OS=Arabidopsis thaliana GN=CALS9 PE=2 SV=Length=189 FN1399-S Chr3 6086001 6104000 0 0 Deletion 17999 OsKitaake03g087300 A0A0E0NRH8_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=153 FN1399-S Chr3 6086001 6104000 0 0 Deletion 17999 OsKitaake03g087400 DEXHE_ARATH DExH-box ATP-dependent RNA helicase DExH14 OS=Arabidopsis thaliana GN=BRR2C PE=2 SV=Leng FN1399-S Chr3 16708001 16722000 0 0 Deletion 13999 OsKitaake03g210400 NRPC2_ARATH DNA-directed RNA polymerase III subunit 2 OS=Arabidopsis thaliana GN=NRPC2 PE=2 SV=Lengt FN1399-S Chr3 19995001 20012000 0 0 Deletion 16999 OsKitaake03g230101 EDR2_ARATH Protein ENHANCED DISEASE RESISTANCE 2 OS=Arabidopsis thaliana GN=EDR2 PE=2 SV=Length=71 FN1399-S Chr3 20876001 20890000 0 0 Deletion 13999 OsKitaake03g232500 EFGM_ORYSJ Elongation factor G, mitochondrial OS=Oryza sativa subsp. japonica GN=Os03g0565500 PE=2 S FN1399-S Chr3 20876001 20890000 0 0 Deletion 13999 OsKitaake03g232600 TOM1_TOBAC Tobamovirus multiplication protein 1 OS=Nicotiana tabacum GN=TOM1 PE=1 SV=Length=28 FN1399-S Chr3 24058001 24074000 0 0 Deletion 15999 OsKitaake03g257300 XPO7A_XENLA Exportin-7-A OS=Xenopus laevis GN=xpo7-a PE=1 SV=Length=108 FN1399-S Chr3 25112001 25133000 0 0 Deletion 20999 OsKitaake03g266200 NET1A_ARATH Protein NETWORKED 1A OS=Arabidopsis thaliana GN=NET1A PE=1 SV=Length=172 FN1399-S Chr3 28190001 28205000 0 0 Deletion 14999 OsKitaake03g291400 SAB_ARATH Protein SABRE OS=Arabidopsis thaliana GN=SAB PE=1 SV=Length=260 FN1399-S Chr3 28190001 28205000 0 0 Deletion 14999 OsKitaake03g291500 UBC18_ARATH Probable ubiquitin-conjugating enzyme E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=2 SV=Len FN1399-S Chr3 28588001 28604000 0 0 Deletion 15999 OsKitaake03g296500 VIP2L_ARATH Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP2 OS=Arabido FN1399-S Chr3 31013001 31029000 0 0 Deletion 15999 OsKitaake03g325600 SCP18_ARATH Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=Length=46 FN1399-S Chr3 31013001 31029000 0 0 Deletion 15999 OsKitaake03g325700 ECA3_ARATH Calcium-transporting ATPase 3, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA3 FN1399-S Chr3 31734001 31747000 0 0 Deletion 12999 OsKitaake03g334600 BCHA1_ARATH Protein SPIRRIG OS=Arabidopsis thaliana GN=SPI PE=1 SV=Length=360 FN1399-S Chr4 8637001 8662000 0 0 Deletion 24999 OsKitaake04g044100 A0A0E0F0Z6_9ORYZ Uncharacterized protein OS=Oryza meridionalis PE=4 SV=Length=242 FN1399-S Chr4 8637001 8662000 0 0 Deletion 24999 OsKitaake04g044200 Hypothetical protein FN1399-S Chr4 8935001 8950000 0 0 Deletion 14999 OsKitaake04g046100 VPS33_ARATH Vacuolar protein-sorting-associated protein 33 homolog OS=Arabidopsis thaliana GN=VPS33 FN1399-S Chr4 16563001 16577000 0 0 Deletion 13999 OsKitaake04g080900 SAD2_ARATH Importin beta-like SAD2 OS=Arabidopsis thaliana GN=SAD2 PE=1 SV=Length=104 FN1399-S Chr4 17412001 17426000 0 0 Deletion 13999 OsKitaake04g085900 ORR29_ORYSJ Two-component response regulator ORR29 OS=Oryza sativa subsp. japonica GN=RR29 PE=3 SV=L FN1399-S Chr4 17412001 17426000 0 0 Deletion 13999 OsKitaake04g086000 ORR29_ORYSJ Two-component response regulator ORR29 OS=Oryza sativa subsp. japonica GN=RR29 PE=3 SV=L FN1399-S Chr4 17412001 17426000 0 0 Deletion 13999 OsKitaake04g086100 ORR29_ORYSJ Two-component response regulator ORR29 OS=Oryza sativa subsp. japonica GN=RR29 PE=3 SV=L FN1399-S Chr4 17412001 17426000 0 0 Deletion 13999 OsKitaake04g086200 ORR28_ORYSJ Two-component response regulator ORR28 OS=Oryza sativa subsp. japonica GN=RR28 PE=3 SV=L FN1399-S Chr4 22740001 22754000 0 0 Deletion 13999 OsKitaake04g135400 K3ZBF8_SETIT Uncharacterized protein OS=Setaria italica GN=SETIT_023879mg PE=4 SV=Length=7 FN1399-S Chr4 22740001 22754000 0 0 Deletion 13999 OsKitaake04g135500 Hypothetical protein FN1399-S Chr4 22740001 22754000 0 0 Deletion 13999 OsKitaake04g135601 Hypothetical protein FN1399-S Chr4 22740001 22754000 0 0 Deletion 13999 OsKitaake04g135700 A0A0P0WAE1_ORYSJ Os04g0435300 protein OS=Oryza sativa subsp. japonica GN=Os04g0435300 PE=4 SV=Length FN1399-S Chr4 29082001 29100000 0 0 Deletion 17999 OsKitaake04g219900 BCHC2_ARATH BEACH domain-containing protein C2 OS=Arabidopsis thaliana GN=BCHC2 PE=1 SV=Length=300 FN1399-S Chr4 35860001 35875000 0 0 Deletion 14999 OsKitaake04g307300 SACS_MOUSE Sacsin OS=Mus musculus GN=Sacs PE=1 SV=2Length=458 FN1399-S Chr5 577001 590000 0 0 Deletion 12999 OsKitaake05g006100 A0A0E0PGG3_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=121 FN1399-S Chr5 577001 590000 0 0 Deletion 12999 OsKitaake05g006200 AB1D_ARATH ABC transporter D family member 1 OS=Arabidopsis thaliana GN=ABCC1 PE=1 SV=Length=133 FN1399-S Chr5 3399001 3419000 0 0 Deletion 19999 OsKitaake05g041100 Hypothetical protein FN1399-S Chr5 3399001 3419000 0 0 Deletion 19999 OsKitaake05g041150 Hypothetical protein FN1399-S Chr5 3399001 3419000 0 0 Deletion 19999 OsKitaake05g041200 Hypothetical protein FN1399-S Chr5 8630001 8660000 0 0 Deletion 29999 OsKitaake05g082400 TOR_ORYSJ Serine/threonine-protein kinase TOR OS=Oryza sativa subsp. japonica GN=TOR PE=2 SV=Length= FN1399-S Chr5 13831001 13839000 0 0 Deletion 7999 OsKitaake05g107300 Hypothetical protein FN1399-S Chr5 13831001 13839000 0 0 Deletion 7999 OsKitaake05g107400 PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana GN=PCMP-H9 FN1399-S Chr5 16787001 16807000 0 0 Deletion 19999 OsKitaake05g128600 APC1_ARATH Anaphase-promoting complex subunit 1 OS=Arabidopsis thaliana GN=APC1 PE=2 SV=Length=167 FN1399-S Chr5 17066001 17092000 0 0 Deletion 25999 OsKitaake05g131400 PLDZ1_ARATH Phospholipase D zeta 1 OS=Arabidopsis thaliana GN=PLDZETA1 PE=1 SV=Length=109 FN1399-S Chr5 19095001 19108000 0 0 Deletion 12999 OsKitaake05g149201 Hypothetical protein FN1399-S Chr5 19095001 19108000 0 0 Deletion 12999 OsKitaake05g149300 KEG_ARATH E3 ubiquitin-protein ligase KEG OS=Arabidopsis thaliana GN=KEG PE=1 SV=Length=162 FN1399-S Chr5 19414001 19426000 0 0 Deletion 11999 OsKitaake05g152600 KN14J_ORYSJ Kinesin-like protein KIN-14J OS=Oryza sativa subsp. japonica GN=KIN14J PE=2 SV=Length=84 FN1399-S Chr5 19414001 19426000 0 0 Deletion 11999 OsKitaake05g152700 CCP31_ORYSJ Cyclin-P3-1 OS=Oryza sativa subsp. japonica GN=CYCP3-1 PE=3 SV=Length=23 FN1399-S Chr5 19414001 19426000 0 0 Deletion 11999 OsKitaake05g152800 ARIA_ARATH ARM REPEAT PROTEIN INTERACTING WITH ABF2 OS=Arabidopsis thaliana GN=ARIA PE=1 SV=Length=7 FN1399-S Chr6 412001 424000 0 0 Deletion 11999 OsKitaake06g003000 ANM7_ORYSJ Protein arginine N-methyltransferase 7 OS=Oryza sativa subsp. japonica GN=PRMT7 PE=2 SV=L FN1399-S Chr6 412001 424000 0 0 Deletion 11999 OsKitaake06g003100 SC16B_ARATH Protein transport protein SEC16B homolog OS=Arabidopsis thaliana GN=SEC16B PE=1 SV=Lengt FN1399-S Chr6 757001 781000 0 0 Deletion 23999 OsKitaake06g007600 CALSA_ARATH Callose synthase 10 OS=Arabidopsis thaliana GN=CALS10 PE=2 SV=Length=190 FN1399-S Chr6 8236001 8254000 0 0 Deletion 17999 OsKitaake06g103700 SYD_ARATH Chromatin structure-remodeling complex protein SYD OS=Arabidopsis thaliana GN=SYD PE=1 SV= FN1399-S Chr6 9917001 9930000 0 0 Deletion 12999 OsKitaake06g115100 Q5VPT5_ORYSJ Putative uncharacterized protein P0450D12.45 OS=Oryza sativa subsp. japonica GN=P0450D1 FN1399-S Chr6 11477001 11495000 0 0 Deletion 17999 OsKitaake06g126800 PSME4_ARATH Proteasome activator subunit 4 OS=Arabidopsis thaliana GN=PA200 PE=2 SV=Length=181 FN1399-S Chr6 12297001 12307000 0 0 Deletion 9999 OsKitaake06g131600 WEB1_ARATH Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 OS=Arabidopsis thaliana GN=WEB1 PE=1 FN1399-S Chr6 12297001 12307000 0 0 Deletion 9999 OsKitaake06g131701 PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thal FN1399-S Chr6 17567001 17582000 0 0 Deletion 14999 OsKitaake06g162600 SNL4_ARATH Paired amphipathic helix protein Sin3-like 4 OS=Arabidopsis thaliana GN=SNL4 PE=3 SV=Leng FN1399-S Chr6 17567001 17582000 0 0 Deletion 14999 OsKitaake06g162700 SD25_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thalia FN1399-S Chr6 27918001 27933000 0 0 Deletion 14999 OsKitaake06g253400 BCHB_ARATH BEACH domain-containing protein B OS=Arabidopsis thaliana GN=BCHB PE=4 SV=Length=260 FN1399-S Chr7 3945001 3963000 0 0 Deletion 17999 OsKitaake07g050300 NEK3_ORYSJ Serine/threonine-protein kinase Nek3 OS=Oryza sativa subsp. japonica GN=NEK3 PE=2 SV=Leng FN1399-S Chr7 6217001 6232000 0 0 Deletion 14999 OsKitaake07g073800 Hypothetical protein FN1399-S Chr7 17071001 17083000 0 0 Deletion 11999 OsKitaake07g139300 VIP6_ARATH Protein CTR9 homolog OS=Arabidopsis thaliana GN=VIP6 PE=1 SV=Length=109 FN1399-S Chr7 26849001 26861000 0 0 Deletion 11999 OsKitaake07g250200 TRRAP_HUMAN Transformation/transcription domain-associated protein OS=Homo sapiens GN=TRRAP PE=1 SV= FN1399-S Chr8 915001 938000 0 0 Deletion 22999 OsKitaake08g012200 VP13A_DICDI Putative vacuolar protein sorting-associated protein 13A OS=Dictyostelium discoideum GN= FN1399-S Chr8 5296001 5307000 0 0 Deletion 10999 OsKitaake08g057300 GL85_ORYSJ Germin-like protein 8-5 OS=Oryza sativa subsp. japonica GN=Os08g0189400 PE=2 SV=Length=22 FN1399-S Chr8 5296001 5307000 0 0 Deletion 10999 OsKitaake08g057400 GL86_ORYSJ Germin-like protein 8-6 OS=Oryza sativa subsp. japonica GN=Os08g0189500 PE=2 SV=Length=22 FN1399-S Chr8 5296001 5307000 0 0 Deletion 10999 OsKitaake08g057500 GL87_ORYSJ Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=Length=22 FN1399-S Chr8 5418001 5445000 0 0 Deletion 26999 OsKitaake08g058900 SSY3_SOLTU Soluble starch synthase 3, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS3 PE=1 SV FN1399-S Chr8 5418001 5445000 0 0 Deletion 26999 OsKitaake08g059000 ATG8C_ORYSJ Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=Length=12 FN1399-S Chr8 5418001 5445000 0 0 Deletion 26999 OsKitaake08g059100 LGUL_ORYSJ Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLYI-11 PE=1 SV=Length=29 FN1399-S Chr8 5418001 5445000 0 0 Deletion 26999 OsKitaake08g059200 SYYC1_ARATH Tyrosine--tRNA ligase 1, cytoplasmic OS=Arabidopsis thaliana GN=At2g33840 PE=2 SV=Length FN1399-S Chr8 11432001 11490000 0 0 Deletion 57999 OsKitaake08g101301 POL_RTBVP Polyprotein P3 OS=Rice tungro bacilliform virus (isolate Philippines) PE=1 SV=Length=167 FN1399-S Chr8 11432001 11490000 0 0 Deletion 57999 OsKitaake08g101401 POL_RTBVP Polyprotein P3 OS=Rice tungro bacilliform virus (isolate Philippines) PE=1 SV=Length=167 FN1399-S Chr8 11432001 11490000 0 0 Deletion 57999 OsKitaake08g101500 POL_RTBVP Polyprotein P3 OS=Rice tungro bacilliform virus (isolate Philippines) PE=1 SV=Length=167 FN1399-S Chr8 16569001 16583000 0 0 Deletion 13999 OsKitaake08g127300 B9G0I6_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_27029 PE=4 SV=Length=8 FN1399-S Chr8 25755001 25771000 0 0 Deletion 15999 OsKitaake08g204200 PSUG_BREBN Pseudouridine-5'-phosphate glycosidase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NB FN1399-S Chr9 1600001 1618000 0 0 Deletion 17999 OsKitaake09g009200 SMC6B_ARATH Structural maintenance of chromosomes protein 6B OS=Arabidopsis thaliana GN=SMC6B PE=2 S FN1399-S Chr9 6939001 6955000 0 0 Deletion 15999 OsKitaake09g039700 ACD6_ARATH Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana GN=ACD6 PE=1 SV=Length=67 FN1399-S Chr9 8756001 8778000 0 0 Deletion 21999 OsKitaake09g051400 Hypothetical protein FN1399-S Chr9 12288001 12312000 0 0 Deletion 23999 OsKitaake09g080300 ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2 SV=Length=37 FN1399-S Chr9 12288001 12312000 0 0 Deletion 23999 OsKitaake09g080400 TPS10_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 OS=Arabidopsis thalia FN1399-S Chr9 14136001 14167000 0 0 Deletion 30999 OsKitaake09g095100 A0A0E0IJD3_ORYNI Uncharacterized protein OS=Oryza nivara PE=4 SV=Length=167 FN1399-S Chr9 14136001 14167000 0 0 Deletion 30999 OsKitaake09g095200 DUF3_ARATH DUF724 domain-containing protein 3 OS=Arabidopsis thaliana GN=DUF3 PE=1 SV=Length=69 FN1399-S Chr9 17752001 17766000 0 0 Deletion 13999 OsKitaake09g134600 NSUN2_MOUSE tRNA (cytosine(34)-C(5))-methyltransferase OS=Mus musculus GN=Nsun2 PE=1 SV=Length=75 FN1399-S Chr9 19575001 19594000 0 0 Deletion 18999 OsKitaake09g160100 BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137 PE=2 SV=Length=28 FN1399-S Chr9 19575001 19594000 0 0 Deletion 18999 OsKitaake09g160200 AGD3_ARATH ADP-ribosylation factor GTPase-activating protein AGD3 OS=Arabidopsis thaliana GN=AGD3 PE FN1399-S Chr9 21308001 21331000 0 0 Deletion 22999 OsKitaake09g184100 STY17_ARATH Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana GN=STY17 PE=1 SV=Length=57 FN1399-S Chr9 21308001 21331000 0 0 Deletion 22999 OsKitaake09g184200 GSTFB_ARATH Glutathione S-transferase F11 OS=Arabidopsis thaliana GN=GSTF11 PE=2 SV=Length=21 FN1399-S Chr10 2165001 2178000 0 0 Deletion 12999 OsKitaake10g016900 RGA2_SOLBU Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=Length=97 FN1399-S Chr10 2165001 2178000 0 0 Deletion 12999 OsKitaake10g017000 RGA3_SOLBU Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=Length= FN1399-S Chr10 3484001 3514000 0 0 Deletion 29999 OsKitaake10g026400 NU188_HUMAN Nucleoporin NUP188 homolog OS=Homo sapiens GN=NUP188 PE=1 SV=Length=174 FN1399-S Chr10 13863001 13886000 0 0 Deletion 22999 OsKitaake10g084800 OP1_MAIZE Protein OPAQUE1 OS=Zea mays GN=O1 PE=1 SV=1Length=152 FN1399-S Chr10 15181001 15194000 0 0 Deletion 12999 OsKitaake10g096400 AARE1_ORYSJ Acylamino-acid-releasing enzyme 1 OS=Oryza sativa subsp. japonica GN=Os10g0415600 PE=3 S FN1399-S Chr10 15181001 15194000 0 0 Deletion 12999 OsKitaake10g096500 AARE2_ORYSJ Acylamino-acid-releasing enzyme 2 OS=Oryza sativa subsp. japonica GN=Os10g0415800 PE=3 S FN1399-S Chr10 15181001 15194000 0 0 Deletion 12999 OsKitaake10g096600 GCN5_ORYSJ Histone acetyltransferase GCN5 OS=Oryza sativa subsp. japonica GN=GCN5 PE=2 SV=Length=51 FN1399-S Chr10 18691001 18707000 0 0 Deletion 15999 OsKitaake10g132900 BAT43_CAEEL BTB and MATH domain-containing protein 43 OS=Caenorhabditis elegans GN=bath-43 PE=3 SV=L FN1399-S Chr10 18691001 18707000 0 0 Deletion 15999 OsKitaake10g133000 Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=Le FN1399-S Chr10 18691001 18707000 0 0 Deletion 15999 OsKitaake10g133100 A0A0E0QKR5_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=23 FN1399-S Chr10 23140001 23163000 0 0 Deletion 22999 OsKitaake10g195250 VP13A_DICDI Putative vacuolar protein sorting-associated protein 13A OS=Dictyostelium discoideum GN= FN1399-S Chr11 7856001 7868000 0 0 Deletion 11999 OsKitaake11g087100 GBA2_MOUSE Non-lysosomal glucosylceramidase OS=Mus musculus GN=Gba2 PE=1 SV=Length=91 FN1399-S Chr11 9466001 9488000 0 0 Deletion 21999 OsKitaake11g099100 RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=Length=92 FN1399-S Chr11 9466001 9488000 0 0 Deletion 21999 OsKitaake11g099200 TF3C3_HUMAN General transcription factor 3C polypeptide 3 OS=Homo sapiens GN=GTF3C3 PE=1 SV=Length=8 FN1399-S Chr11 14663001 14785000 0 0 Deletion 121999 OsKitaake11g121800 BX8_MAIZE DIMBOA UDP-glucosyltransferase BX8 OS=Zea mays GN=Bx8 PE=1 SV=Length=45 FN1399-S Chr11 14663001 14785000 0 0 Deletion 121999 OsKitaake11g121901 Hypothetical protein FN1399-S Chr11 14663001 14785000 0 0 Deletion 121999 OsKitaake11g122000 LRL22_ARATH LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.2 OS=Arabidops FN1399-S Chr11 14663001 14785000 0 0 Deletion 121999 OsKitaake11g122100 PSBN_WHEAT Protein PsbN OS=Triticum aestivum GN=psbN PE=3 SV=Length=4 FN1399-S Chr11 14663001 14785000 0 0 Deletion 121999 OsKitaake11g122200 Q53KF6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=LOC_Os11g25530 PE=4 FN1399-S Chr11 14663001 14785000 0 0 Deletion 121999 OsKitaake11g122300 Q53KF5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=LOC_Os11g25540 PE=4 FN1399-S Chr11 14663001 14785000 0 0 Deletion 121999 OsKitaake11g122400 BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2 SV=Length=45 FN1399-S Chr11 18617001 18631000 0 0 Deletion 13999 OsKitaake11g144300 HASTY_ARATH Protein HASTY 1 OS=Arabidopsis thaliana GN=HST1 PE=1 SV=Length=120 FN1399-S Chr11 18617001 18631000 0 0 Deletion 13999 OsKitaake11g144400 B9GAW1_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_34022 PE=4 SV=Length=169 FN1399-S Chr11 18659001 18671000 0 0 Deletion 11999 OsKitaake11g144700 LRR1_CAPAN Leucine-rich repeat protein 1 OS=Capsicum annuum GN=LRR1 PE=1 SV=Length=19 FN1399-S Chr11 18659001 18671000 0 0 Deletion 11999 OsKitaake11g144800 BAK1_ORYSJ LRR receptor kinase BAK1 OS=Oryza sativa subsp. japonica GN=BAK1 PE=1 SV=Length=62 FN1399-S Chr11 18659001 18671000 0 0 Deletion 11999 OsKitaake11g144900 LRR1_ARATH Leucine-rich repeat protein 1 OS=Arabidopsis thaliana GN=LRR1 PE=1 SV=Length=21 FN1399-S Chr11 24523001 24543000 0 0 Deletion 19999 OsKitaake11g197800 DIR4_ARATH Dirigent protein 4 OS=Arabidopsis thaliana GN=DIR4 PE=2 SV=Length=18 FN1399-S Chr11 26581001 26594000 0 0 Deletion 12999 OsKitaake11g216200 KN14O_ORYSJ Kinesin-like protein KIN-14O OS=Oryza sativa subsp. japonica GN=KIN14O PE=2 SV=Length=60 FN1399-S Chr11 26581001 26594000 0 0 Deletion 12999 OsKitaake11g216300 A0A0P0Y4T1_ORYSJ Os11g0648200 protein OS=Oryza sativa subsp. japonica GN=Os11g0648200 PE=4 SV=Length FN1399-S Chr12 7144001 7158000 0 0 Deletion 13999 OsKitaake12g080100 EXOC5_ORYSJ Exocyst complex component 5 OS=Oryza sativa subsp. japonica GN=SEC10 PE=2 SV=Length=80 FN1399-S Chr12 10050001 10063000 0 0 Deletion 12999 OsKitaake12g095100 MTR4_ARATH DExH-box ATP-dependent RNA helicase DExH9 OS=Arabidopsis thaliana GN=MTR4 PE=2 SV=Length= FN1399-S Chr12 10050001 10063000 0 0 Deletion 12999 OsKitaake12g095200 REF6_ARATH Lysine-specific demethylase REF6 OS=Arabidopsis thaliana GN=REF6 PE=1 SV=Length=136 FN1399-S Chr12 10438001 10454000 0 0 Deletion 15999 OsKitaake12g097800 UFSP_ORYSJ Probable Ufm1-specific protease OS=Oryza sativa subsp. japonica GN=Os12g0285500 PE=2 SV=L FN1399-S Chr12 10438001 10454000 0 0 Deletion 15999 OsKitaake12g097900 A0A0E0RG26_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=6 FN1399-S Chr12 10438001 10454000 0 0 Deletion 15999 OsKitaake12g098000 ORP1D_ARATH Oxysterol-binding protein-related protein 1D OS=Arabidopsis thaliana GN=ORP1D PE=2 SV=Le FN1399-S Chr12 17997001 18011000 0 0 Deletion 13999 OsKitaake12g132300 UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 PE=2 SV=Length FN1399-S Chr12 20656001 20670000 0 0 Deletion 13999 OsKitaake12g160700 Hypothetical protein FN1399-S Chr12 20656001 20670000 0 0 Deletion 13999 OsKitaake12g160800 Hypothetical protein FN1399-S Chr12 23444001 23461000 0 0 Deletion 16999 OsKitaake12g187800 Q2QN61_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=Os12g0577800 PE=4 SV=Length=78 FN1399-S Chr12 23444001 23461000 0 0 Deletion 16999 OsKitaake12g187900 PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana GN=PCMP-E2 FN1399-S Chr12 24478001 24491000 0 0 Deletion 12999 OsKitaake12g197400 Q0IM69_ORYSJ Os12g0594200 protein OS=Oryza sativa subsp. japonica GN=Os12g0594200 PE=4 SV=Length=289 FN1399-S Chr12 24478001 24491000 0 0 Deletion 12999 OsKitaake12g197500 VP13A_SCHPO Vacuolar protein sorting-associated protein 13a OS=Schizosaccharomyces pombe (strain 972 FN1399-S Chr12 27131001 27154000 0 0 Deletion 22999 OsKitaake12g228600 SMC1_ARATH Structural maintenance of chromosomes protein 1 OS=Arabidopsis thaliana GN=SMC1 PE=2 SV=L FN1399-S Chr1 41661040 A-C 0 0 Single Base Substitution 0 INTRON Homo FN1399-S Chr2 14741282 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1399-S Chr2 16694991 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1399-S Chr2 31126006 G-T 0 0 Single Base Substitution 0 INTRON Hetero FN1399-S Chr3 300576 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1399-S Chr3 1655314 A-T 0 0 Single Base Substitution 0 START_GAINED Hetero FN1399-S Chr3 1655315 G-T 0 0 Single Base Substitution 0 UTR_5_PRIME Hetero FN1399-S Chr3 7065572 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1399-S Chr3 8857556 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1399-S Chr4 7076042 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1399-S Chr4 12498226 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1399-S Chr4 17618914 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1399-S Chr4 20970154 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1399-S Chr4 35951786 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1399-S Chr5 7760802 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1399-S Chr5 7760821 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1399-S Chr5 18919365 G-C 0 0 Single Base Substitution 0 INTRON Hetero FN1399-S Chr6 1849782 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1399-S Chr6 16233921 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1399-S Chr6 24885013 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1399-S Chr6 27765430 A-G 0 0 Single Base Substitution 0 INTRON Hetero FN1399-S Chr7 5483428 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1399-S Chr7 6772903 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1399-S Chr7 27268163 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1399-S Chr8 14335707 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1399-S Chr8 22659142 T-A 0 0 Single Base Substitution 0 INTRON Hetero FN1399-S Chr10 263854 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1399-S Chr10 12934959 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1399-S Chr11 109544 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1399-S Chr11 11618116 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1399-S Chr11 12229699 T-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1399-S Chr11 12237417 A-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1399-S Chr12 24017733 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1399-S Chr12 26826734 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo