FN1458-S Chr1 10032587 10032588 0 0 Deletion 1 INTERGENIC Homo FN1458-S Chr2 6852886 6852888 0 0 Deletion 2 INTERGENIC Hetero FN1458-S Chr5 15256613 15256620 0 0 Deletion 7 INTERGENIC Hetero FN1458-S Chr5 27534837 27534845 0 0 Deletion 8 UTR_5_PRIME Hetero FN1458-S Chr6 11566775 11566777 0 0 Deletion 2 INTERGENIC Hetero FN1458-S Chr7 4078438 4078442 0 0 Deletion 4 INTERGENIC Hetero FN1458-S Chr7 21296447 21296448 0 0 Deletion 1 UTR_5_PRIME Hetero FN1458-S Chr7 22163279 22163281 0 0 Deletion 2 INTERGENIC Hetero FN1458-S Chr8 28304244 28304246 0 0 Deletion 2 INTERGENIC Hetero FN1458-S Chr9 6146502 6146510 0 0 Deletion 8 INTERGENIC Hetero FN1458-S Chr10 326964 326966 0 0 Deletion 2 FRAME_SHIFT Homo OsKitaake10g002200 A0A0E0QVI7_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=5 FN1458-S Chr11 2787309 2787325 0 0 Deletion 16 INTRON Hetero FN1458-S Chr11 16337944 16337946 0 0 Deletion 2 INTRON Hetero FN1458-S Chr12 23947750 23947754 0 0 Deletion 4 INTERGENIC Homo FN1458-S Chr1 39475423 39475423 0 0 Insertion 2 INTRON Hetero FN1458-S Chr4 5441273 5441273 0 0 Insertion 2 INTERGENIC Hetero FN1458-S Chr4 15647487 15647487 0 0 Insertion 2 INTERGENIC Hetero FN1458-S Chr4 30445616 30445616 0 0 Insertion 4 INTRON Hetero FN1458-S Chr5 6760517 6760517 0 0 Insertion 2 INTRON Hetero FN1458-S Chr8 14127168 14127168 0 0 Insertion 4 INTRON Hetero FN1458-S Chr9 387232 387232 0 0 Insertion 10 INTERGENIC Hetero FN1458-S Chr9 11076411 11076411 0 0 Insertion 1 INTRON Hetero FN1458-S Chr10 10450305 10450305 0 0 Insertion 4 INTERGENIC Hetero FN1458-S Chr9 3585917 3586098 0 0 Deletion 181 Hetero 0 FN1458-S Chr7 8498072 8498072 0 0 Insertion 1 Hetero 0 FN1458-S Chr6 26036460 26316889 0 0 Inversion 0 Hetero OsKitaake06g235900 RPOT3_NICSY DNA-directed RNA polymerase 3, chloroplastic OS=Nicotiana sylvestris GN=RPOT3 PE=2 SV=Le FN1458-S Chr6 26036473 26316887 0 0 Inversion 0 Hetero OsKitaake06g235900 RPOT3_NICSY DNA-directed RNA polymerase 3, chloroplastic OS=Nicotiana sylvestris GN=RPOT3 PE=2 SV=Le FN1458-S Chr1 21548001 21575000 0 0 Deletion 26999 FN1458-S Chr3 28651001 28665000 0 0 Deletion 13999 FN1458-S Chr5 12511001 12559000 0 0 Deletion 47999 FN1458-S Chr1 371001 381000 0 0 Deletion 9999 OsKitaake01g005200 ATM_ARATH Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana GN=ATM PE=2 SV=Length=385 FN1458-S Chr1 3646001 3658000 0 0 Deletion 11999 OsKitaake01g049000 RST1_ARATH Protein RST1 OS=Arabidopsis thaliana GN=RST1 PE=2 SV=Length=184 FN1458-S Chr1 41462001 41483000 0 0 Deletion 20999 OsKitaake01g452800 DJB12_MOUSE DnaJ homolog subfamily B member 12 OS=Mus musculus GN=Dnajb12 PE=1 SV=Length=37 FN1458-S Chr2 598001 614000 0 0 Deletion 15999 OsKitaake02g009000 MOM1_ARATH Helicase protein MOM1 OS=Arabidopsis thaliana GN=MOM1 PE=1 SV=Length=200 FN1458-S Chr2 3189001 3203000 0 0 Deletion 13999 OsKitaake02g045900 PSYR1_ARATH Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSY1R PE=1 SV=Lengt FN1458-S Chr2 3189001 3203000 0 0 Deletion 13999 OsKitaake02g046100 STR18_ARATH Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana GN=STR18 PE=1 SV=Length=13 FN1458-S Chr2 3189001 3203000 0 0 Deletion 13999 OsKitaake02g046200 GUFP_ORYSJ Translation factor GUF1 homolog, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g01 FN1458-S Chr2 3189001 3203000 0 0 Deletion 13999 OsKitaake02g046100 STR18_ARATH Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana GN=STR18 PE=1 SV=Length=13 FN1458-S Chr2 3189001 3203000 0 0 Deletion 13999 OsKitaake02g046200 GUFP_ORYSJ Translation factor GUF1 homolog, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g01 FN1458-S Chr2 12747001 12762000 0 0 Deletion 14999 OsKitaake02g142400 Q6Z849_ORYSJ Os02g0316900 protein OS=Oryza sativa subsp. japonica GN=P0572D06.30-1 PE=4 SV=Length=58 FN1458-S Chr2 12747001 12762000 0 0 Deletion 14999 OsKitaake02g142500 C7IY45_ORYSJ Os02g0316900 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os02g0316900 PE=4 SV FN1458-S Chr2 12747001 12762000 0 0 Deletion 14999 OsKitaake02g142600 A0A0D9YR65_9ORYZ Uncharacterized protein OS=Oryza glumipatula PE=4 SV=Length=148 FN1458-S Chr2 12747001 12762000 0 0 Deletion 14999 OsKitaake02g142650 B9F5A7_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_06447 PE=4 SV=Length=55 FN1458-S Chr2 16072001 16100000 0 0 Deletion 27999 OsKitaake02g166300 VP13A_DICDI Putative vacuolar protein sorting-associated protein 13A OS=Dictyostelium discoideum GN= FN1458-S Chr3 171001 185000 0 0 Deletion 13999 OsKitaake03g002600 CNOT1_XENTR CCR4-NOT transcription complex subunit 1 OS=Xenopus tropicalis GN=cnot1 PE=2 SV=Length=2 FN1458-S Chr3 171001 185000 0 0 Deletion 13999 OsKitaake03g002700 PGK2_METKA 2-phosphoglycerate kinase OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / N FN1458-S Chr3 171001 185000 0 0 Deletion 13999 OsKitaake03g002600 CNOT1_XENTR CCR4-NOT transcription complex subunit 1 OS=Xenopus tropicalis GN=cnot1 PE=2 SV=Length=2 FN1458-S Chr3 171001 185000 0 0 Deletion 13999 OsKitaake03g002700 PGK2_METKA 2-phosphoglycerate kinase OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / N FN1458-S Chr3 1087001 1106000 0 0 Deletion 18999 OsKitaake03g016901 CALS9_ARATH Callose synthase 9 OS=Arabidopsis thaliana GN=CALS9 PE=2 SV=Length=189 FN1458-S Chr3 23756001 23759000 0 0 Deletion 2999 OsKitaake03g255300 TAS_SHIFL Protein tas OS=Shigella flexneri GN=tas PE=3 SV=Length=34 FN1458-S Chr4 4959001 4972000 0 0 Deletion 12999 OsKitaake04g022400 EMF2_ARATH Polycomb group protein EMBRYONIC FLOWER 2 OS=Arabidopsis thaliana GN=EMF2 PE=1 SV=Length= FN1458-S Chr5 575001 597000 0 0 Deletion 21999 OsKitaake05g006100 A0A0E0PGG3_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=121 FN1458-S Chr5 575001 597000 0 0 Deletion 21999 OsKitaake05g006200 AB1D_ARATH ABC transporter D family member 1 OS=Arabidopsis thaliana GN=ABCC1 PE=1 SV=Length=133 FN1458-S Chr5 575001 597000 0 0 Deletion 21999 OsKitaake05g006300 T2AG_ORYSJ Transcription initiation factor IIA subunit 2 OS=Oryza sativa subsp. japonica GN=TFIIAy P FN1458-S Chr5 1444001 1456000 0 0 Deletion 11999 OsKitaake05g017900 GT51_ORYSJ Probable glucuronosyltransferase Os05g0123100 OS=Oryza sativa subsp. japonica GN=Os05g012 FN1458-S Chr5 1444001 1456000 0 0 Deletion 11999 OsKitaake05g018000 IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=Length=45 FN1458-S Chr6 11482001 11497000 0 0 Deletion 14999 OsKitaake06g126800 PSME4_ARATH Proteasome activator subunit 4 OS=Arabidopsis thaliana GN=PA200 PE=2 SV=Length=181 FN1458-S Chr6 17567001 17580000 0 0 Deletion 12999 OsKitaake06g162600 SNL4_ARATH Paired amphipathic helix protein Sin3-like 4 OS=Arabidopsis thaliana GN=SNL4 PE=3 SV=Leng FN1458-S Chr6 17567001 17580000 0 0 Deletion 12999 OsKitaake06g162700 SD25_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thalia FN1458-S Chr7 1657001 1671000 0 0 Deletion 13999 OsKitaake07g023000 LRK42_ARATH L-type lectin-domain containing receptor kinase IV.2 OS=Arabidopsis thaliana GN=LECRK42 FN1458-S Chr7 1657001 1671000 0 0 Deletion 13999 OsKitaake07g023100 LRK42_ARATH L-type lectin-domain containing receptor kinase IV.2 OS=Arabidopsis thaliana GN=LECRK42 FN1458-S Chr7 1657001 1671000 0 0 Deletion 13999 OsKitaake07g023200 LRK41_ARATH L-type lectin-domain containing receptor kinase IV.1 OS=Arabidopsis thaliana GN=LECRK41 FN1458-S Chr7 1657001 1671000 0 0 Deletion 13999 OsKitaake07g023300 LRK41_ARATH L-type lectin-domain containing receptor kinase IV.1 OS=Arabidopsis thaliana GN=LECRK41 FN1458-S Chr7 1657001 1671000 0 0 Deletion 13999 OsKitaake07g023400 LRK41_ARATH L-type lectin-domain containing receptor kinase IV.1 OS=Arabidopsis thaliana GN=LECRK41 FN1458-S Chr7 1790001 1804000 0 0 Deletion 13999 OsKitaake07g025200 BAME1_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis th FN1458-S Chr7 6216001 6233000 0 0 Deletion 16999 OsKitaake07g073800 Hypothetical protein FN1458-S Chr7 6216001 6233000 0 0 Deletion 16999 OsKitaake07g073900 Hypothetical protein FN1458-S Chr8 5421001 5445000 0 0 Deletion 23999 OsKitaake08g058900 SSY3_SOLTU Soluble starch synthase 3, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS3 PE=1 SV FN1458-S Chr8 5421001 5445000 0 0 Deletion 23999 OsKitaake08g059000 ATG8C_ORYSJ Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=Length=12 FN1458-S Chr8 5421001 5445000 0 0 Deletion 23999 OsKitaake08g059100 LGUL_ORYSJ Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLYI-11 PE=1 SV=Length=29 FN1458-S Chr8 5421001 5445000 0 0 Deletion 23999 OsKitaake08g059200 SYYC1_ARATH Tyrosine--tRNA ligase 1, cytoplasmic OS=Arabidopsis thaliana GN=At2g33840 PE=2 SV=Length FN1458-S Chr9 1601001 1613000 0 0 Deletion 11999 OsKitaake09g009200 SMC6B_ARATH Structural maintenance of chromosomes protein 6B OS=Arabidopsis thaliana GN=SMC6B PE=2 S FN1458-S Chr9 6939001 6951000 0 0 Deletion 11999 OsKitaake09g039700 ACD6_ARATH Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana GN=ACD6 PE=1 SV=Length=67 FN1458-S Chr9 19574001 19589000 0 0 Deletion 14999 OsKitaake09g160100 BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137 PE=2 SV=Length=28 FN1458-S Chr9 19574001 19589000 0 0 Deletion 14999 OsKitaake09g160200 AGD3_ARATH ADP-ribosylation factor GTPase-activating protein AGD3 OS=Arabidopsis thaliana GN=AGD3 PE FN1458-S Chr10 15185001 15194000 0 0 Deletion 8999 OsKitaake10g096400 AARE1_ORYSJ Acylamino-acid-releasing enzyme 1 OS=Oryza sativa subsp. japonica GN=Os10g0415600 PE=3 S FN1458-S Chr10 15185001 15194000 0 0 Deletion 8999 OsKitaake10g096500 AARE2_ORYSJ Acylamino-acid-releasing enzyme 2 OS=Oryza sativa subsp. japonica GN=Os10g0415800 PE=3 S FN1458-S Chr10 15185001 15194000 0 0 Deletion 8999 OsKitaake10g096600 GCN5_ORYSJ Histone acetyltransferase GCN5 OS=Oryza sativa subsp. japonica GN=GCN5 PE=2 SV=Length=51 FN1458-S Chr11 24528001 24543000 0 0 Deletion 14999 OsKitaake11g197800 DIR4_ARATH Dirigent protein 4 OS=Arabidopsis thaliana GN=DIR4 PE=2 SV=Length=18 FN1458-S Chr11 25115001 25125000 0 0 Deletion 9999 OsKitaake11g203030 Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thal FN1458-S Chr11 25115001 25125000 0 0 Deletion 9999 OsKitaake11g203035 MOSA_MAIZE Autonomous transposable element EN-1 mosaic protein OS=Zea mays PE=2 SV=Length=62 FN1458-S Chr12 10442001 10454000 0 0 Deletion 11999 OsKitaake12g097800 UFSP_ORYSJ Probable Ufm1-specific protease OS=Oryza sativa subsp. japonica GN=Os12g0285500 PE=2 SV=L FN1458-S Chr12 10442001 10454000 0 0 Deletion 11999 OsKitaake12g097900 A0A0E0RG26_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=6 FN1458-S Chr12 10442001 10454000 0 0 Deletion 11999 OsKitaake12g098000 ORP1D_ARATH Oxysterol-binding protein-related protein 1D OS=Arabidopsis thaliana GN=ORP1D PE=2 SV=Le FN1458-S Chr12 23807001 23820000 0 0 Deletion 12999 OsKitaake12g191766 Q2QN03_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=LOC_Os12g39430 PE=4 SV=Lengt FN1458-S Chr12 24378001 24399000 0 0 Deletion 20999 OsKitaake12g196301 A0A0E0RJG5_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=18 FN1458-S Chr12 24378001 24399000 0 0 Deletion 20999 OsKitaake12g196400 Hypothetical protein FN1458-S Chr12 24378001 24399000 0 0 Deletion 20999 OsKitaake12g196500 Hypothetical protein FN1458-S Chr1 32525334 C-A 0 0 Single Base Substitution 0 INTRON Hetero FN1458-S Chr1 42902399 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1458-S Chr2 7112167 C-T 0 0 Single Base Substitution 0 INTRON Hetero FN1458-S Chr2 17836920 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1458-S Chr2 29533340 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1458-S Chr2 36059310 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake02g380000 P2B10_ARATH F-box protein PP2-B10 OS=Arabidopsis thaliana GN=PP2B10 PE=1 SV=Length=27 FN1458-S Chr2 36059311 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN1458-S Chr3 12706626 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1458-S Chr3 27192811 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1458-S Chr3 33529961 G-C 0 0 Single Base Substitution 0 INTRON Homo FN1458-S Chr4 1357053 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1458-S Chr4 10673427 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1458-S Chr4 13892538 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1458-S Chr4 14052534 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1458-S Chr4 18446988 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1458-S Chr4 19292889 T-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1458-S Chr5 18519830 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1458-S Chr5 24090544 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1458-S Chr5 24899122 T-A 0 0 Single Base Substitution 0 INTRON Homo FN1458-S Chr6 2848594 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1458-S Chr6 11125833 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1458-S Chr6 11597910 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1458-S Chr6 17600797 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1458-S Chr6 27970236 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1458-S Chr7 15921295 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1458-S Chr7 15935211 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1458-S Chr8 5222931 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1458-S Chr8 13866166 G-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1458-S Chr8 14234639 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1458-S Chr8 25847697 T-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1458-S Chr9 3117445 T-A 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN1458-S Chr9 4144216 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1458-S Chr9 8280589 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1458-S Chr11 5930359 C-T 0 0 Single Base Substitution 0 INTRON Homo FN1458-S Chr11 6927612 G-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1458-S Chr11 11167776 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1458-S Chr11 15207663 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1458-S Chr12 13828721 G-A 0 0 Single Base Substitution 0 INTRON Hetero FN1458-S Chr12 16822019 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1458-S Chr12 23925877 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo