FN1465-S Chr1 2860870 2860875 0 0 Deletion 5 INTERGENIC Homo FN1465-S Chr1 11107876 11107877 0 0 Deletion 1 INTERGENIC Hetero FN1465-S Chr1 32289450 32289453 0 0 Deletion 3 INTERGENIC Hetero FN1465-S Chr1 34704869 34704880 0 0 Deletion 11 INTERGENIC Homo FN1465-S Chr2 23429427 23429436 0 0 Deletion 9 CODON_CHANGE_PLUS_CODON_DELETION Homo OsKitaake02g229500 PHT21_ARATH Inorganic phosphate transporter 2-1, chloroplastic OS=Arabidopsis thaliana GN=PHT2-1 PE= FN1465-S Chr3 37622254 37622265 0 0 Deletion 11 INTERGENIC Hetero FN1465-S Chr5 309280 309285 0 0 Deletion 5 INTRON Hetero FN1465-S Chr5 7774908 7774916 0 0 Deletion 8 INTERGENIC Hetero FN1465-S Chr6 10039269 10039270 0 0 Deletion 1 INTERGENIC Hetero FN1465-S Chr6 15959689 15959692 0 0 Deletion 3 INTRON Homo FN1465-S Chr9 13859772 13859773 0 0 Deletion 1 INTERGENIC Hetero FN1465-S Chr9 19022396 19022397 0 0 Deletion 1 FRAME_SHIFT Hetero OsKitaake09g152500 HEN4_ARATH KH domain-containing protein HEN4 OS=Arabidopsis thaliana GN=HEN4 PE=1 SV=Length=85 FN1465-S Chr12 3583163 3583164 0 0 Deletion 1 INTERGENIC Hetero FN1465-S Chr12 16710501 16710516 0 0 Deletion 15 INTERGENIC Homo FN1465-S Chr1 8610634 8610634 0 0 Insertion 2 INTERGENIC Hetero FN1465-S Chr2 17642860 17642860 0 0 Insertion 2 FRAME_SHIFT Hetero OsKitaake02g176900 ROS1_ARATH Protein ROS1 OS=Arabidopsis thaliana GN=ROS1 PE=1 SV=Length=139 FN1465-S Chr10 10029022 10029022 0 0 Insertion 2 INTERGENIC Hetero FN1465-S Chr4 17722892 17722893 0 0 Deletion 1 Hetero 0 FN1465-S Chr9 19991864 19991864 0 0 Insertion 2 Hetero OsKitaake09g166800 GLT2_CROSA Crocetin glucosyltransferase 2 OS=Crocus sativus GN=GLT2 PE=1 SV=Length=46 FN1465-S Chr9 21415852 Chr1 39729363 0 Translocation 0 Hetero OsKitaake09g186500 SAU39_ORYSJ Auxin-responsive protein SAUR36 OS=Oryza sativa subsp. japonica GN=SAUR39 PE=2 SV=Length FN1465-S Chr9 21416002 Chr1 39729359 0 Translocation 0 Hetero OsKitaake09g186500 SAU39_ORYSJ Auxin-responsive protein SAUR36 OS=Oryza sativa subsp. japonica GN=SAUR39 PE=2 SV=Length FN1465-S Chr9 21416003 Chr7 10640331 0 Translocation 0 Hetero OsKitaake09g186500 SAU39_ORYSJ Auxin-responsive protein SAUR36 OS=Oryza sativa subsp. japonica GN=SAUR39 PE=2 SV=Length FN1465-S Chr9 21417374 Chr7 10640325 0 Translocation 0 Hetero OsKitaake09g186600 A0A0D3H9N2_9ORYZ Uncharacterized protein OS=Oryza barthii PE=4 SV=Length=10 FN1465-S Chr4 27080284 Chr3 25149601 0 Translocation 0 Hetero OsKitaake03g266400 TCX2_ARATH Protein tesmin/TSO1-like CXC 2 OS=Arabidopsis thaliana GN=TCX2 PE=1 SV=Length=67 FN1465-S Chr4 27080428 Chr3 25149597 0 Translocation 0 Hetero OsKitaake03g266400 TCX2_ARATH Protein tesmin/TSO1-like CXC 2 OS=Arabidopsis thaliana GN=TCX2 PE=1 SV=Length=67 FN1465-S Chr9 10346392 Chr4 19196424 0 Translocation 0 Hetero OsKitaake04g097300 A0A0E0P7Z0_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=27 FN1465-S Chr12 18956782 Chr7 4087348 0 Translocation 0 Hetero OsKitaake07g051900 CYP63_ARATH Peptidyl-prolyl cis-trans isomerase CYP63 OS=Arabidopsis thaliana GN=CYP63 PE=1 SV=Lengt FN1465-S Chr9 10346253 Chr4 17596731 0 Translocation 0 Hetero FN1465-S Chr4 27080274 27155271 0 0 Inversion 0 Homo OsKitaake04g197600 ADK2_ARATH Adenosine kinase 2 OS=Arabidopsis thaliana GN=ADK2 PE=1 SV=Length=34 FN1465-S Chr4 27080455 27155285 0 0 Inversion 0 Homo OsKitaake04g197600 ADK2_ARATH Adenosine kinase 2 OS=Arabidopsis thaliana GN=ADK2 PE=1 SV=Length=34 FN1465-S Chr4 15438181 16153553 0 0 Inversion 0 Hetero FN1465-S Chr12 18803610 19265258 0 0 Inversion 0 Hetero FN1465-S Chr2 16310001 16322000 0 0 Deletion 11999 OsKitaake02g167700 TOP1_RICBR DNA topoisomerase 1 OS=Rickettsia bellii (strain RML369-C) GN=topA PE=3 SV=Length=80 FN1465-S Chr4 15780001 15788000 0 0 Deletion 7999 OsKitaake04g077400 P2C38_ORYSJ Probable protein phosphatase 2C 38 OS=Oryza sativa subsp. japonica GN=Os04g0321800 PE=2 FN1465-S Chr4 17669001 17715000 0 0 Deletion 45999 OsKitaake04g088500 FACR1_ARATH Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=Length=49 FN1465-S Chr4 17669001 17715000 0 0 Deletion 45999 OsKitaake04g088600 FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=Length=78 FN1465-S Chr5 22049001 22059000 0 0 Deletion 9999 OsKitaake05g179900 MED13_ARATH Mediator of RNA polymerase II transcription subunit 13 OS=Arabidopsis thaliana GN=MED13 FN1465-S Chr6 17906001 17916000 0 0 Deletion 9999 OsKitaake06g164800 GWD1_CITRE Alpha-glucan water dikinase, chloroplastic OS=Citrus reticulata GN=R1 PE=2 SV=Length=147 FN1465-S Chr6 28541001 28549000 0 0 Deletion 7999 OsKitaake06g261800 PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana GN=At5g655 FN1465-S Chr6 28541001 28549000 0 0 Deletion 7999 OsKitaake06g261900 REV1_ARATH DNA repair protein REV1 OS=Arabidopsis thaliana GN=REV1 PE=2 SV=Length=110 FN1465-S Chr6 29195001 29206000 0 0 Deletion 10999 OsKitaake06g270000 Hypothetical protein FN1465-S Chr6 29195001 29206000 0 0 Deletion 10999 OsKitaake06g270100 A0A0E0Q280_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=7 FN1465-S Chr6 29195001 29206000 0 0 Deletion 10999 OsKitaake06g270200 Q5Z845_ORYSJ Os06g0700500 protein OS=Oryza sativa subsp. japonica GN=Os06g0700500 PE=2 SV=Length=37 FN1465-S Chr7 27677001 27688000 0 0 Deletion 10999 OsKitaake07g258500 GLTB_ORYSJ Ferredoxin-dependent glutamate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN FN1465-S Chr9 14236001 14251000 0 0 Deletion 14999 OsKitaake09g095800 TAF2_ARATH Transcription initiation factor TFIID subunit 2 OS=Arabidopsis thaliana GN=TAF2 PE=2 SV=L FN1465-S Chr9 22339001 22351000 0 0 Deletion 11999 OsKitaake09g202500 GP210_ARATH Nuclear pore complex protein GP210 OS=Arabidopsis thaliana GN=GB210 PE=1 SV=Length=192 FN1465-S Chr10 10485001 10501000 0 0 Deletion 15999 OsKitaake10g061300 OP1_MAIZE Protein OPAQUE1 OS=Zea mays GN=O1 PE=1 SV=1Length=152 FN1465-S Chr12 18802001 18960000 0 0 Deletion 157999 OsKitaake12g138700 Hypothetical protein FN1465-S Chr12 18802001 18960000 0 0 Deletion 157999 OsKitaake12g138900 Hypothetical protein FN1465-S Chr12 18802001 18960000 0 0 Deletion 157999 OsKitaake12g139000 A0A0E0RHN4_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=29 FN1465-S Chr12 18802001 18960000 0 0 Deletion 157999 OsKitaake12g139100 A2ZKV1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_38442 PE=4 SV=Len FN1465-S Chr12 18802001 18960000 0 0 Deletion 157999 OsKitaake12g139200 Q2QQ67_ORYSJ Os12g0505100 protein OS=Oryza sativa subsp. japonica GN=Os12g0505100 PE=4 SV=Length=25 FN1465-S Chr12 18802001 18960000 0 0 Deletion 157999 OsKitaake12g139500 FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=Length=78 FN1465-S Chr12 18802001 18960000 0 0 Deletion 157999 OsKitaake12g139600 A0A0E0RHN9_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=25 FN1465-S Chr12 18802001 18960000 0 0 Deletion 157999 OsKitaake12g139701 Q2QQ56_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=LOC_Os12g32170 PE=4 SV=Lengt FN1465-S Chr1 4953868 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1465-S Chr1 15322560 T-A 0 0 Single Base Substitution 0 INTRON Hetero FN1465-S Chr1 15352309 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr1 15400439 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr1 25423943 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr1 25423944 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr1 26813867 A-G 0 0 Single Base Substitution 0 INTRON Hetero FN1465-S Chr1 34471178 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1465-S Chr2 5555539 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr2 19403730 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr2 27282562 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr3 8964619 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr3 13442822 A-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1465-S Chr3 16403869 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr3 29579708 A-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1465-S Chr3 34122082 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo OsKitaake03g368700 AGO13_ORYSJ Protein argonaute 13 OS=Oryza sativa subsp. japonica GN=AGO13 PE=2 SV=Length=119 FN1465-S Chr3 35379925 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1465-S Chr4 6171948 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr4 6869666 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr4 27755404 T-C 0 0 Single Base Substitution 0 INTRON Hetero FN1465-S Chr5 5819290 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr5 7752104 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr5 15898554 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr5 19635997 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr5 21154150 T-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr5 29834937 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr6 14301077 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr6 23285807 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr7 553109 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr8 2314451 T-A 0 0 Single Base Substitution 0 INTRON Homo FN1465-S Chr8 11687795 C-A 0 0 Single Base Substitution 0 SPLICE_SITE_DONOR Hetero OsKitaake08g102800 KAD5_ORYSJ Probable adenylate kinase 5, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g028820 FN1465-S Chr9 8614788 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr9 9726756 G-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr9 13069883 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr9 14064974 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr9 20979017 G-A 0 0 Single Base Substitution 0 INTRON Hetero FN1465-S Chr10 6878319 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr10 13367755 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr10 22778346 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr11 6458576 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr12 13986437 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr12 14032270 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1465-S Chr12 19264756 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero