FN1647-S Chr1 10634192 10634203 0 0 Deletion 11 INTERGENIC Homo FN1647-S Chr1 16769879 16769880 0 0 Deletion 1 INTERGENIC Hetero FN1647-S Chr2 12387434 12387441 0 0 Deletion 7 INTERGENIC Homo FN1647-S Chr4 28517983 28517985 0 0 Deletion 2 INTERGENIC Homo FN1647-S Chr5 5387709 5387719 0 0 Deletion 10 INTERGENIC Homo FN1647-S Chr7 11268159 11268160 0 0 Deletion 1 INTERGENIC Hetero FN1647-S Chr7 25762908 25762923 0 0 Deletion 15 INTERGENIC Homo FN1647-S Chr9 17447609 17447611 0 0 Deletion 2 INTERGENIC Hetero FN1647-S Chr10 5427699 5427732 0 0 Deletion 33 INTERGENIC Hetero FN1647-S Chr1 20399653 20399653 0 0 Insertion 2 INTERGENIC Hetero FN1647-S Chr2 1659687 1659687 0 0 Insertion 1 INTERGENIC Hetero FN1647-S Chr2 8104107 8104107 0 0 Insertion 2 INTERGENIC Hetero FN1647-S Chr3 8123587 8123587 0 0 Insertion 2 INTERGENIC Hetero FN1647-S Chr4 32016344 32016344 0 0 Insertion 2 INTERGENIC Hetero FN1647-S Chr5 5510289 5510289 0 0 Insertion 2 INTERGENIC Hetero FN1647-S Chr4 13171382 13171383 0 0 Deletion 1 Hetero 0 FN1647-S Chr4 10143274 10143274 0 0 Insertion 1 Hetero 0 FN1647-S Chr3 36425723 36425971 0 0 Inversion 0 Hetero OsKitaake03g404400 TC159_ARATH Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana GN=TOC159 PE=1 SV= FN1647-S Chr6 11271382 12188524 0 0 Inversion 0 Hetero OsKitaake06g124700 BUB1_ARATH Mitotic checkpoint serine/threonine-protein kinase BUB1 OS=Arabidopsis thaliana GN=BUB1 P FN1647-S Chr6 11271384 12188585 0 0 Inversion 0 Hetero OsKitaake06g124700 BUB1_ARATH Mitotic checkpoint serine/threonine-protein kinase BUB1 OS=Arabidopsis thaliana GN=BUB1 P FN1647-S Chr10 19914841 19915128 0 0 Inversion 0 Hetero OsKitaake10g149200 RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=Length=79 FN1647-S Chr3 36425723 36425971 0 0 Inversion 0 Hetero OsKitaake03g404400 TC159_ARATH Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana GN=TOC159 PE=1 SV= FN1647-S Chr10 19914841 19915128 0 0 Inversion 0 Hetero OsKitaake10g149200 RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=Length=79 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g304550 Hypothetical protein FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g304600 MARD1_ARATH Protein MARD1 OS=Arabidopsis thaliana GN=MARD1 PE=2 SV=Length=26 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g304700 ZFP34_ORYSJ Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza sativa subsp. japonica GN=RZFP34 PE FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g304900 SUT35_ARATH Probable sulfate transporter 3.5 OS=Arabidopsis thaliana GN=SULTR3;5 PE=2 SV=Length=63 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g305000 MLN51_ARATH Protein MLN51 homolog OS=Arabidopsis thaliana GN=MLN51 PE=1 SV=Length=60 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g305100 NAKR2_ARATH Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana GN=NAKR2 PE=2 SV=Lengt FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g305200 HF101_ORYSJ Fe-S cluster assembly factor HCF101, chloroplastic OS=Oryza sativa subsp. japonica GN=HC FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g305300 GDL62_ARATH GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana GN=At4g10955 PE=2 SV=Length=35 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g305400 APF2_ARATH Aspartyl protease family protein 2 OS=Arabidopsis thaliana GN=APF2 PE=2 SV=Length=48 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g305500 A0A0E0N1S3_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=16 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g305600 NDUS7_BRAOL NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Brassica olerace FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g305700 PPSP1_ARATH Inorganic pyrophosphatase 1 OS=Arabidopsis thaliana GN=PS2 PE=1 SV=Length=29 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g305800 CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g305900 SSY4_ARATH Probable starch synthase 4, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=SS4 PE= FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g306000 SAT1_ORYSJ Probable serine acetyltransferase 1 OS=Oryza sativa subsp. japonica GN=SAT1 PE=2 SV=Lengt FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g306100 RGA3_SOLBU Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=Length= FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g306200 R13L1_ARATH Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=3 S FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g306300 RGA2_SOLBU Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=Length=97 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g306200 R13L1_ARATH Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=3 S FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g306400 RGA3_SOLBU Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=Length= FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g306500 RGA3_SOLBU Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=Length= FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g306600 RGA3_SOLBU Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=Length= FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g306700 R13L1_ARATH Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=3 S FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g306900 RGA3_SOLBU Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=Length= FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g307000 Q8W0D4_ORYSJ Putative uncharacterized protein P0690B02.21 OS=Oryza sativa subsp. japonica GN=P0690B0 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g307100 Hypothetical protein FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g307000 Q8W0D4_ORYSJ Putative uncharacterized protein P0690B02.21 OS=Oryza sativa subsp. japonica GN=P0690B0 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g307200 RGA3_SOLBU Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=Length= FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g307300 RGGB_ARATH RGG repeats nuclear RNA binding protein B OS=Arabidopsis thaliana GN=RGGB PE=1 SV=Length= FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g307400 LPXA_ARATH Probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochon FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g307500 RAX2_ARATH Transcription factor RAX2 OS=Arabidopsis thaliana GN=RAX2 PE=1 SV=Length=29 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g307700 A0A0E0N1V4_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=17 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g307800 HXK9_ORYSJ Hexokinase-9 OS=Oryza sativa subsp. japonica GN=HXK9 PE=2 SV=Length=50 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g307900 RRAA2_ARATH Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 OS=Arabidopsis thaliana GN=At5g164 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g308000 A0A0D9WXF9_9ORYZ Uncharacterized protein OS=Leersia perrieri PE=4 SV=Length=17 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g308100 EF2_ARATH Elongation factor 2 OS=Arabidopsis thaliana GN=LOS1 PE=1 SV=Length=84 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g308200 SDEH4_ARATH Senescence/dehydration-associated protein At4g35985, chloroplastic OS=Arabidopsis thalia FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g308300 RS242_ARATH 40S ribosomal protein S24-2 OS=Arabidopsis thaliana GN=RPS24B PE=2 SV=Length=13 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g308400 MAOX_VITVI NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=Length=59 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g308500 Y1235_ORYSJ B3 domain-containing protein Os01g0723500 OS=Oryza sativa subsp. japonica GN=Os01g072350 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g308600 KPRS3_ORYSJ Ribose-phosphate pyrophosphokinase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=O FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g308700 Y1237_ORYSJ B3 domain-containing protein Os03g0120900 OS=Oryza sativa subsp. japonica GN=Os01g072370 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g308800 AB8B_ARATH Putative ABC transporter B family member 8 OS=Arabidopsis thaliana GN=ABCB8 PE=5 SV=Lengt FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g309000 AB38G_ORYSJ ABC transporter G family member 38 OS=Oryza sativa subsp. japonica GN=ABCG38 PE=3 SV=Len FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g309050 I1NRC9_ORYGL Uncharacterized protein OS=Oryza glaberrima PE=4 SV=Length=24 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g309100 LFS_ALLCE Lachrymatory-factor synthase OS=Allium cepa GN=LFS PE=1 SV=Length=16 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g309200 A0A0D9YEE2_9ORYZ Uncharacterized protein OS=Oryza glumipatula PE=4 SV=Length=25 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g309300 CSPLC_ORYSJ CASP-like protein 3A1 OS=Oryza sativa subsp. japonica GN=Os01g0725400 PE=2 SV=Length=20 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g309400 YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis PE=4 SV=Length=130 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g309300 CSPLC_ORYSJ CASP-like protein 3A1 OS=Oryza sativa subsp. japonica GN=Os01g0725400 PE=2 SV=Length=20 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g309600 UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1 SV=Length=44 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g309700 SPA3_ARATH Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=SPA3 PE=1 SV=Length=84 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g309800 AGP31_ARATH Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana GN=AGP31 PE=1 SV=Length FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g309700 SPA3_ARATH Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=SPA3 PE=1 SV=Length=84 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g309800 AGP31_ARATH Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana GN=AGP31 PE=1 SV=Length FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g309900 AGP31_ARATH Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana GN=AGP31 PE=1 SV=Length FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g310100 MAD32_ORYSJ MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=Lengt FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g310200 PDF1_ARATH Protodermal factor 1 OS=Arabidopsis thaliana GN=PDF1 PE=2 SV=Length=30 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g310300 A0A0E0N1Y2_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=12 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g310400 GAUTF_ARATH Probable galacturonosyltransferase 15 OS=Arabidopsis thaliana GN=GAUT15 PE=2 SV=Length=5 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g310500 A0A0D9YEF7_9ORYZ Uncharacterized protein OS=Oryza glumipatula PE=4 SV=Length=8 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g310600 CIA30_ARATH Probable complex I intermediate-associated protein 30 OS=Arabidopsis thaliana GN=At1g173 FN1647-S Chr1 30757001 31137000 0 0 Deletion 379999 OsKitaake01g310700 A0A0D9YEF9_9ORYZ Uncharacterized protein OS=Oryza glumipatula PE=4 SV=Length=13 FN1647-S Chr1 3382775 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1647-S Chr1 22754295 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1647-S Chr1 33528635 G-A 0 0 Single Base Substitution 0 INTRON Hetero FN1647-S Chr1 33838611 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1647-S Chr2 1960897 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1647-S Chr2 4316836 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1647-S Chr2 32002310 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1647-S Chr3 5769613 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake03g081800 RPS5_ARATH Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=Length=88 FN1647-S Chr3 15788187 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1647-S Chr4 2144348 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1647-S Chr4 2370529 G-A 0 0 Single Base Substitution 0 INTRON Hetero FN1647-S Chr4 2370530 C-A 0 0 Single Base Substitution 0 INTRON Hetero FN1647-S Chr4 11319222 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1647-S Chr4 23151048 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1647-S Chr5 9534862 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1647-S Chr5 9534863 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1647-S Chr6 20069090 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1647-S Chr6 22094801 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1647-S Chr6 29246320 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN1647-S Chr7 5363607 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1647-S Chr7 6697223 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1647-S Chr7 7674744 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1647-S Chr7 13771743 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1647-S Chr7 18769235 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1647-S Chr8 16581375 A-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1647-S Chr8 16736172 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1647-S Chr8 25209781 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1647-S Chr10 3611410 C-T 0 0 Single Base Substitution 0 UTR_5_PRIME Homo FN1647-S Chr11 1771145 A-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1647-S Chr11 10606907 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1647-S Chr11 15073583 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1647-S Chr11 24457470 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1647-S Chr12 13441551 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo OsKitaake12g111400 BGA15_ORYSJ Beta-galactosidase 15 OS=Oryza sativa subsp. japonica GN=Os12g0429200 PE=2 SV=Length=91