FN1754-S Chr2 6525191 6525194 0 0 Deletion 3 CODON_CHANGE_PLUS_CODON_DELETION Hetero OsKitaake02g088600 HDAC3_ORYSJ Histone deacetylase 3 OS=Oryza sativa subsp. japonica GN=HDAC3 PE=2 SV=Length=51 FN1754-S Chr3 23954276 23954277 0 0 Deletion 1 FRAME_SHIFT Hetero OsKitaake03g256700 Q6AU15_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g41920 PE=4 SV=Length=33 FN1754-S Chr5 19833661 19833667 0 0 Deletion 6 CODON_CHANGE_PLUS_CODON_DELETION Hetero OsKitaake05g157600 RIHA_CITK8 Pyrimidine-specific ribonucleoside hydrolase RihA OS=Citrobacter koseri (strain ATCC BAA- FN1754-S Chr1 9330595 9330595 0 0 Insertion 2 INTERGENIC Hetero FN1754-S Chr3 32831753 32831753 0 0 Insertion 2 INTERGENIC Hetero FN1754-S Chr6 28944801 28944801 0 0 Insertion 3 UTR_5_PRIME Hetero FN1754-S Chr3 23318902 24306374 0 0 Inversion 0 Hetero OsKitaake03g250900 UGDH2_ORYSJ UDP-glucose 6-dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=UGD2 PE=2 SV=Length=48 FN1754-S Chr3 23318925 24306393 0 0 Inversion 0 Hetero OsKitaake03g250900 UGDH2_ORYSJ UDP-glucose 6-dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=UGD2 PE=2 SV=Length=48 FN1754-S Chr3 23318902 24306374 0 0 Inversion 0 Hetero OsKitaake03g260100 Y3222_ORYSJ B3 domain-containing protein Os03g0622200 OS=Oryza sativa subsp. japonica GN=Os03g062220 FN1754-S Chr3 23318925 24306393 0 0 Inversion 0 Hetero OsKitaake03g260100 Y3222_ORYSJ B3 domain-containing protein Os03g0622200 OS=Oryza sativa subsp. japonica GN=Os03g062220 FN1754-S Chr12 26107712 26973731 0 0 Inversion 0 Hetero FN1754-S Chr12 26107734 26973784 0 0 Inversion 0 Hetero FN1754-S Chr2 20322001 20535000 0 0 Deletion 212999 OsKitaake02g198000 SYTM2_ARATH Threonine--tRNA ligase, chloroplastic/mitochondrial 2 OS=Arabidopsis thaliana GN=EMB2761 FN1754-S Chr2 20322001 20535000 0 0 Deletion 212999 OsKitaake02g198050 ILA_ARATH Protein ILITYHIA OS=Arabidopsis thaliana GN=ILA PE=1 SV=Length=269 FN1754-S Chr2 20322001 20535000 0 0 Deletion 212999 OsKitaake02g198100 ILA_ARATH Protein ILITYHIA OS=Arabidopsis thaliana GN=ILA PE=1 SV=Length=269 FN1754-S Chr2 20322001 20535000 0 0 Deletion 212999 OsKitaake02g198200 A0A0P0VK33_ORYSJ Os02g0538400 protein OS=Oryza sativa subsp. japonica GN=Os02g0538400 PE=4 SV=Length FN1754-S Chr2 20322001 20535000 0 0 Deletion 212999 OsKitaake02g198300 NHL1_ARATH NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana GN=NHL1 PE=2 SV=Length=20 FN1754-S Chr2 20322001 20535000 0 0 Deletion 212999 OsKitaake02g198400 BZP06_ORYSJ Basic leucine zipper 6 OS=Oryza sativa subsp. japonica GN=BZIP06 PE=2 SV=Length=26 FN1754-S Chr2 20322001 20535000 0 0 Deletion 212999 OsKitaake02g198500 DGDG1_LOTJA Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Lotus japonicus GN=DGD1 PE=2 SV= FN1754-S Chr2 20322001 20535000 0 0 Deletion 212999 OsKitaake02g198600 PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23 PE=1 SV=Length=41 FN1754-S Chr2 20322001 20535000 0 0 Deletion 212999 OsKitaake02g198700 MKS1_ARATH Protein MKS1 OS=Arabidopsis thaliana GN=MKS1 PE=1 SV=Length=22 FN1754-S Chr2 20322001 20535000 0 0 Deletion 212999 OsKitaake02g198800 RNJ_CORGL Ribonuclease J OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / L FN1754-S Chr2 20322001 20535000 0 0 Deletion 212999 OsKitaake02g198900 YF48_SCHPO Uncharacterized WD repeat-containing protein C3H5.08c OS=Schizosaccharomyces pombe (strai FN1754-S Chr2 20322001 20535000 0 0 Deletion 212999 OsKitaake02g198950 A0A0E0NG36_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=21 FN1754-S Chr2 20322001 20535000 0 0 Deletion 212999 OsKitaake02g198900 YF48_SCHPO Uncharacterized WD repeat-containing protein C3H5.08c OS=Schizosaccharomyces pombe (strai FN1754-S Chr2 20322001 20535000 0 0 Deletion 212999 OsKitaake02g198950 A0A0E0NG36_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=21 FN1754-S Chr2 20322001 20535000 0 0 Deletion 212999 OsKitaake02g199000 A0A0E0NG35_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=16 FN1754-S Chr2 20322001 20535000 0 0 Deletion 212999 OsKitaake02g199100 A0A1E5W365_9POAL Uncharacterized protein OS=Dichanthelium oligosanthes GN=BAE44_0007152 PE=4 SV=Leng FN1754-S Chr2 20322001 20535000 0 0 Deletion 212999 OsKitaake02g199200 PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27 PE=2 SV=Length=42 FN1754-S Chr2 20322001 20535000 0 0 Deletion 212999 OsKitaake02g199301 Q6ET00_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OJ1298_H07.23 PE=4 SV=Length FN1754-S Chr2 20322001 20535000 0 0 Deletion 212999 OsKitaake02g199400 SDC1_ORYSJ Serine decarboxylase 1 OS=Oryza sativa subsp. japonica GN=SDC1 PE=3 SV=Length=48 FN1754-S Chr2 20322001 20535000 0 0 Deletion 212999 OsKitaake02g199500 ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2 SV=Length=18 FN1754-S Chr2 20322001 20535000 0 0 Deletion 212999 OsKitaake02g199600 QCR6_SOLTU Cytochrome b-c1 complex subunit 6 OS=Solanum tuberosum PE=1 SV=Length=6 FN1754-S Chr2 20322001 20535000 0 0 Deletion 212999 OsKitaake02g199700 LLG1_ARATH GPI-anchored protein LLG1 OS=Arabidopsis thaliana GN=LLG1 PE=1 SV=Length=16 FN1754-S Chr2 20322001 20535000 0 0 Deletion 212999 OsKitaake02g199800 FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=Length=78 FN1754-S Chr4 10371001 10394000 0 0 Deletion 22999 OsKitaake04g055000 STR18_ARATH Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana GN=STR18 PE=1 SV=Length=13 FN1754-S Chr4 10371001 10394000 0 0 Deletion 22999 OsKitaake04g055150 Q7XWX0_ORYSJ OSJNBb0058J09.9 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0058J09.9 PE=4 SV=Leng FN1754-S Chr4 10371001 10394000 0 0 Deletion 22999 OsKitaake04g055300 A0A0P0W7Q5_ORYSJ Os04g0250050 protein OS=Oryza sativa subsp. japonica GN=Os04g0250050 PE=4 SV=Length FN1754-S Chr4 10371001 10394000 0 0 Deletion 22999 OsKitaake04g055400 A0A0D3FTE6_9ORYZ Uncharacterized protein OS=Oryza barthii PE=4 SV=Length=13 FN1754-S Chr6 19201001 19449000 0 0 Deletion 247999 OsKitaake06g173500 PYL8_ARATH Abscisic acid receptor PYL8 OS=Arabidopsis thaliana GN=PYL8 PE=1 SV=Length=18 FN1754-S Chr6 19201001 19449000 0 0 Deletion 247999 OsKitaake06g173600 PYL8_ARATH Abscisic acid receptor PYL8 OS=Arabidopsis thaliana GN=PYL8 PE=1 SV=Length=18 FN1754-S Chr6 19201001 19449000 0 0 Deletion 247999 OsKitaake06g173700 C7J3W5_ORYSJ Os06g0528350 protein OS=Oryza sativa subsp. japonica GN=Os06g0528350 PE=4 SV=Length=9 FN1754-S Chr6 19201001 19449000 0 0 Deletion 247999 OsKitaake06g173800 SPSY_ARATH Spermine synthase OS=Arabidopsis thaliana GN=SPMS PE=1 SV=Length=35 FN1754-S Chr6 19201001 19449000 0 0 Deletion 247999 OsKitaake06g173900 GSXL9_ARATH Flavin-containing monooxygenase FMO GS-OX-like 9 OS=Arabidopsis thaliana GN=At5g07800 PE FN1754-S Chr6 19201001 19449000 0 0 Deletion 247999 OsKitaake06g174000 UBR7_HUMAN Putative E3 ubiquitin-protein ligase UBR7 OS=Homo sapiens GN=UBR7 PE=1 SV=Length=42 FN1754-S Chr6 19201001 19449000 0 0 Deletion 247999 OsKitaake06g174100 A0A0E0AAF7_9ORYZ Uncharacterized protein OS=Oryza glumipatula PE=4 SV=Length=15 FN1754-S Chr6 19201001 19449000 0 0 Deletion 247999 OsKitaake06g174200 A0A0E0PYP2_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=9 FN1754-S Chr6 19201001 19449000 0 0 Deletion 247999 OsKitaake06g174300 YUID_BACSU Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) GN=yuiD PE=4 SV=L FN1754-S Chr6 19201001 19449000 0 0 Deletion 247999 OsKitaake06g174400 NAC76_ORYSJ NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=Length FN1754-S Chr6 19201001 19449000 0 0 Deletion 247999 OsKitaake06g174500 VQ10_ARATH VQ motif-containing protein 10 OS=Arabidopsis thaliana GN=VQ10 PE=1 SV=Length=10 FN1754-S Chr6 19201001 19449000 0 0 Deletion 247999 OsKitaake06g174600 SEN2_ORYSJ Probable tRNA-splicing endonuclease subunit Sen2 OS=Oryza sativa subsp. japonica GN=Os06g FN1754-S Chr6 19201001 19449000 0 0 Deletion 247999 OsKitaake06g174700 E1311_ARATH Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana GN=At1g32860 PE=1 SV=Length= FN1754-S Chr1 18498382 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1754-S Chr1 27140358 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1754-S Chr2 5594922 A-T 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN1754-S Chr2 5787474 A-C 0 0 Single Base Substitution 0 INTRON Hetero FN1754-S Chr2 19217291 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1754-S Chr2 25667913 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1754-S Chr2 35505042 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN1754-S Chr3 6604422 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1754-S Chr3 6755923 T-C 0 0 Single Base Substitution 0 INTRON Hetero FN1754-S Chr3 23488504 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1754-S Chr4 832591 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1754-S Chr4 12542981 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1754-S Chr4 12838005 A-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN1754-S Chr6 28503820 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1754-S Chr7 8688520 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1754-S Chr7 12903373 G-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1754-S Chr7 16357455 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1754-S Chr7 18288644 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1754-S Chr7 19723591 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN1754-S Chr7 20360585 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1754-S Chr8 18035877 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1754-S Chr8 24442587 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN1754-S Chr9 623662 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1754-S Chr9 10556814 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1754-S Chr9 21154205 G-T 0 0 Single Base Substitution 0 INTRON Hetero FN1754-S Chr9 21739989 G-C 0 0 Single Base Substitution 0 INTRON Hetero FN1754-S Chr10 9043891 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1754-S Chr10 20581995 T-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1754-S Chr11 8966386 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1754-S Chr11 13115672 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1754-S Chr11 15683026 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1754-S Chr11 18420676 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1754-S Chr11 25850478 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1754-S Chr12 5550191 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN1754-S Chr12 20545623 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero