FN2274-S Chr1 4538435 4538439 0 0 Deletion 4 UTR_3_PRIME Hetero FN2274-S Chr1 43212353 43212358 0 0 Deletion 5 INTERGENIC Hetero FN2274-S Chr1 43241577 43241579 0 0 Deletion 2 INTERGENIC Hetero FN2274-S Chr2 6919301 6919303 0 0 Deletion 2 UTR_3_PRIME Homo FN2274-S Chr2 27509719 27509724 0 0 Deletion 5 UTR_3_PRIME Hetero FN2274-S Chr3 11167253 11167257 0 0 Deletion 4 INTERGENIC Hetero FN2274-S Chr3 12395084 12395085 0 0 Deletion 1 INTRON Hetero FN2274-S Chr3 14043662 14043671 0 0 Deletion 9 SPLICE_SITE_DONOR Hetero OsKitaake03g183800 HUAL3_ARATH Protein HUA2-LIKE 3 OS=Arabidopsis thaliana GN=HULK3 PE=2 SV=Length=134 FN2274-S Chr3 21012809 21012819 0 0 Deletion 10 INTERGENIC Hetero FN2274-S Chr4 16560823 16560824 0 0 Deletion 1 INTRON Hetero FN2274-S Chr5 2508456 2508466 0 0 Deletion 10 INTERGENIC Homo FN2274-S Chr6 25065191 25065213 0 0 Deletion 22 INTERGENIC Homo FN2274-S Chr6 29883931 29883940 0 0 Deletion 9 UTR_3_PRIME Homo FN2274-S Chr8 2816672 2816674 0 0 Deletion 2 UTR_5_PRIME Homo FN2274-S Chr8 4067930 4067940 0 0 Deletion 10 INTRON Hetero FN2274-S Chr8 4566283 4566287 0 0 Deletion 4 INTRON Hetero FN2274-S Chr9 1447463 1447464 0 0 Deletion 1 INTERGENIC Hetero FN2274-S Chr9 3318720 3318722 0 0 Deletion 2 INTERGENIC Hetero FN2274-S Chr9 19472131 19472134 0 0 Deletion 3 INTERGENIC Hetero FN2274-S Chr10 2228395 2228398 0 0 Deletion 3 INTERGENIC Hetero FN2274-S Chr10 10154886 10154888 0 0 Deletion 2 INTRON Hetero FN2274-S Chr10 15607779 15607781 0 0 Deletion 2 FRAME_SHIFT Homo OsKitaake10g101300 MARD1_ARATH Protein MARD1 OS=Arabidopsis thaliana GN=MARD1 PE=2 SV=Length=26 FN2274-S Chr10 17473843 17473887 0 0 Deletion 44 INTERGENIC Homo FN2274-S Chr11 24738078 24738083 0 0 Deletion 5 INTRON Hetero FN2274-S Chr11 25911464 25911466 0 0 Deletion 2 INTERGENIC Hetero FN2274-S Chr8 5193334 5193334 0 0 Insertion 2 INTERGENIC Hetero FN2274-S Chr4 2728023 2728023 0 0 Insertion 2 Hetero 0 FN2274-S Chr12 24136453 Chr6 19420023 0 Translocation 0 Hetero OsKitaake12g194100 Q2QMW4_ORYSJ Retrotransposon protein, putative, Ty1-copia subclass OS=Oryza sativa subsp. japonica G FN2274-S Chr2 29498567 29793401 0 0 Inversion 0 Hetero OsKitaake02g297200 SCAM5_ORYSJ Secretory carrier-associated membrane protein 5 OS=Oryza sativa subsp. japonica GN=SCAMP FN2274-S Chr2 29793402 30053495 0 0 Inversion 0 Hetero OsKitaake02g301300 ABAH1_ORYSJ Abscisic acid 8'-hydroxylase 1 OS=Oryza sativa subsp. japonica GN=CYP707A5 PE=2 SV=Lengt FN2274-S Chr1 30390181 31264557 0 0 Inversion 0 Homo OsKitaake01g312900 TPS7_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 OS=Arabidopsis thaliana FN2274-S Chr1 30399236 31264564 0 0 Inversion 0 Homo OsKitaake01g312900 TPS7_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 OS=Arabidopsis thaliana FN2274-S Chr2 29498567 29793401 0 0 Inversion 0 Hetero OsKitaake02g301300 ABAH1_ORYSJ Abscisic acid 8'-hydroxylase 1 OS=Oryza sativa subsp. japonica GN=CYP707A5 PE=2 SV=Lengt FN2274-S Chr2 29793402 30053495 0 0 Inversion 0 Hetero OsKitaake02g305200 DEK1_ORYSJ Calpain-type cysteine protease ADL1 OS=Oryza sativa subsp. japonica GN=ADL1 PE=1 SV=Lengt FN2274-S Chr9 21746959 22077609 0 0 Inversion 0 Hetero OsKitaake09g197900 PRS6B_ARATH 26S proteasome regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=Len FN2274-S Chr1 30390001 30399000 0 0 Deletion 8999 OsKitaake01g300400 A0A0E0FS22_ORYNI Uncharacterized protein OS=Oryza nivara PE=4 SV=Length=16 FN2274-S Chr1 30390001 30399000 0 0 Deletion 8999 OsKitaake01g300500 MENG_BACCR Demethylmenaquinone methyltransferase OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JC FN2274-S Chr1 9874592 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr1 10456316 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr1 14570801 T-C 0 0 Single Base Substitution 0 INTRON Hetero FN2274-S Chr1 27895094 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr1 34927203 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr1 35997568 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr1 41728547 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2274-S Chr1 42652461 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr1 42812252 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr2 5908374 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr2 11828857 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr2 17055259 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2274-S Chr2 17387021 A-T 0 0 Single Base Substitution 0 INTRON Hetero FN2274-S Chr2 23602281 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr2 28604930 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr2 35792025 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2274-S Chr3 4542972 T-C 0 0 Single Base Substitution 0 SPLICE_SITE_DONOR Homo OsKitaake03g065500 A2XDA2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10285 PE=4 SV=Len FN2274-S Chr3 8597290 T-C 0 0 Single Base Substitution 0 INTRON Hetero FN2274-S Chr3 9484199 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2274-S Chr3 20440261 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr3 25970235 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN2274-S Chr3 25970236 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake03g273900 GATC_ORYSJ Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Oryza sativ FN2274-S Chr3 32288692 C-T 0 0 Single Base Substitution 0 SPLICE_SITE_DONOR Hetero OsKitaake03g342600 C7J7E7_ORYSJ Os10g0174500 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os10g0174500 PE=4 SV FN2274-S Chr4 1538502 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN2274-S Chr4 8403692 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr4 16201545 G-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr4 16405177 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr4 17430939 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr5 13660 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2274-S Chr5 5925416 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr5 8212810 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN2274-S Chr5 21120780 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr5 28543213 G-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr6 10480463 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo OsKitaake06g118100 A0A0E0HP52_ORYNI Uncharacterized protein OS=Oryza nivara PE=4 SV=Length=75 FN2274-S Chr6 10480464 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo OsKitaake06g118100 A0A0E0HP52_ORYNI Uncharacterized protein OS=Oryza nivara PE=4 SV=Length=75 FN2274-S Chr6 11581331 G-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN2274-S Chr6 23417101 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN2274-S Chr7 6202746 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr7 10323393 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr7 10334312 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr7 17411267 A-T 0 0 Single Base Substitution 0 INTRON Hetero FN2274-S Chr8 3732031 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN2274-S Chr8 13378269 T-C 0 0 Single Base Substitution 0 INTRON Hetero FN2274-S Chr8 14997007 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr8 17181496 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr8 21470339 G-A 0 0 Single Base Substitution 0 INTRON Hetero FN2274-S Chr9 15126943 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr10 5813553 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo OsKitaake10g040100 Q8LNA2_ORYSJ Putative uncharacterized protein OSJNBa0047G15.25 OS=Oryza sativa subsp. japonica GN=OS FN2274-S Chr10 5955357 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr10 12151572 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN2274-S Chr10 18166231 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr10 18514443 A-G 0 0 Single Base Substitution 0 INTRON Hetero FN2274-S Chr10 18514590 T-G 0 0 Single Base Substitution 0 INTRON Hetero FN2274-S Chr10 18687006 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr11 20660758 T-A 0 0 Single Base Substitution 0 INTRON Homo FN2274-S Chr12 75577 C-T 0 0 Single Base Substitution 0 INTRON Hetero FN2274-S Chr12 566936 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr12 2354683 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr12 7309800 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2274-S Chr12 14338863 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero