FN2275-S Chr1 5061132 5061137 0 0 Deletion 5 INTERGENIC Hetero FN2275-S Chr1 40060676 40060682 0 0 Deletion 6 INTERGENIC Hetero FN2275-S Chr1 42773920 42773923 0 0 Deletion 3 UTR_3_PRIME Hetero FN2275-S Chr2 980314 980317 0 0 Deletion 3 INTERGENIC Hetero FN2275-S Chr2 2095061 2095063 0 0 Deletion 2 INTERGENIC Hetero FN2275-S Chr2 33488475 33488483 0 0 Deletion 8 INTERGENIC Hetero FN2275-S Chr2 35096350 35096352 0 0 Deletion 2 INTERGENIC Hetero FN2275-S Chr3 34998988 34998991 0 0 Deletion 3 UTR_3_PRIME Hetero FN2275-S Chr6 7974857 7974865 0 0 Deletion 8 INTERGENIC Homo FN2275-S Chr6 25541486 25541492 0 0 Deletion 6 INTERGENIC Hetero FN2275-S Chr7 14065490 14065495 0 0 Deletion 5 INTRON Homo FN2275-S Chr8 12904262 12904265 0 0 Deletion 3 INTERGENIC Hetero FN2275-S Chr8 22622233 22622238 0 0 Deletion 5 FRAME_SHIFT Hetero OsKitaake08g173500 ARID4_ARATH AT-rich interactive domain-containing protein 4 OS=Arabidopsis thaliana GN=ARID4 PE=2 SV FN2275-S Chr8 24427147 24427148 0 0 Deletion 1 INTERGENIC Hetero FN2275-S Chr8 27105524 27105526 0 0 Deletion 2 INTERGENIC Hetero FN2275-S Chr9 12742959 12742968 0 0 Deletion 9 INTERGENIC Homo FN2275-S Chr9 18634958 18634962 0 0 Deletion 4 UTR_5_PRIME Homo FN2275-S Chr10 865932 865933 0 0 Deletion 1 INTERGENIC Homo FN2275-S Chr10 6160282 6160283 0 0 Deletion 1 INTERGENIC Hetero FN2275-S Chr10 7068847 7068850 0 0 Deletion 3 INTERGENIC Hetero FN2275-S Chr10 18492471 18492477 0 0 Deletion 6 INTRON Hetero FN2275-S Chr11 15987312 15987313 0 0 Deletion 1 INTERGENIC Hetero FN2275-S Chr11 24862788 24862790 0 0 Deletion 2 INTERGENIC Hetero FN2275-S Chr11 25966894 25966896 0 0 Deletion 2 INTRON Hetero FN2275-S Chr12 7543031 7543046 0 0 Deletion 15 INTERGENIC Hetero FN2275-S Chr12 8230774 8230779 0 0 Deletion 5 INTERGENIC Hetero FN2275-S Chr12 26396049 26396080 0 0 Deletion 31 INTERGENIC Hetero FN2275-S Chr12 26801857 26801859 0 0 Deletion 2 INTERGENIC Hetero FN2275-S Chr1 10589519 10589519 0 0 Insertion 1 INTERGENIC Hetero FN2275-S Chr1 11047629 11047629 0 0 Insertion 3 INTERGENIC Hetero FN2275-S Chr2 21380293 21380293 0 0 Insertion 2 INTRON Hetero FN2275-S Chr2 34500236 34500236 0 0 Insertion 3 INTERGENIC Hetero FN2275-S Chr3 29834224 29834224 0 0 Insertion 3 INTERGENIC Hetero FN2275-S Chr5 19199334 19199334 0 0 Insertion 1 INTERGENIC Homo FN2275-S Chr8 18758039 18758039 0 0 Insertion 4 INTERGENIC Hetero FN2275-S Chr10 21002581 21002581 0 0 Insertion 2 INTERGENIC Hetero FN2275-S Chr11 9684114 9684114 0 0 Insertion 3 INTERGENIC Hetero FN2275-S Chr12 14132526 Chr4 13196113 0 Translocation 0 Hetero OsKitaake04g062500 CENPO_CHICK Centromere protein O OS=Gallus gallus GN=CENPO PE=1 SV=Length=32 FN2275-S Chr12 14132527 Chr4 13194216 0 Translocation 0 Hetero OsKitaake04g062500 CENPO_CHICK Centromere protein O OS=Gallus gallus GN=CENPO PE=1 SV=Length=32 FN2275-S Chr4 13491907 13548471 0 0 Inversion 0 Hetero OsKitaake04g064600 R13L1_ARATH Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=3 S FN2275-S Chr10 9496596 9673336 0 0 Inversion 0 Hetero OsKitaake10g055400 LHP1_ORYSJ Probable chromo domain-containing protein LHP1 OS=Oryza sativa subsp. japonica GN=LHP1 PE FN2275-S Chr6 76094 274692 0 0 Inversion 0 Hetero FN2275-S Chr1 31101001 31133000 0 0 Deletion 31999 OsKitaake01g310300 A0A0E0N1Y2_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=12 FN2275-S Chr1 31101001 31133000 0 0 Deletion 31999 OsKitaake01g310400 GAUTF_ARATH Probable galacturonosyltransferase 15 OS=Arabidopsis thaliana GN=GAUT15 PE=2 SV=Length=5 FN2275-S Chr1 31101001 31133000 0 0 Deletion 31999 OsKitaake01g310500 A0A0D9YEF7_9ORYZ Uncharacterized protein OS=Oryza glumipatula PE=4 SV=Length=8 FN2275-S Chr1 31101001 31133000 0 0 Deletion 31999 OsKitaake01g310600 CIA30_ARATH Probable complex I intermediate-associated protein 30 OS=Arabidopsis thaliana GN=At1g173 FN2275-S Chr1 31101001 31133000 0 0 Deletion 31999 OsKitaake01g310700 A0A0D9YEF9_9ORYZ Uncharacterized protein OS=Oryza glumipatula PE=4 SV=Length=13 FN2275-S Chr1 39369001 39402000 0 0 Deletion 32999 OsKitaake01g424700 EHD3_ORYSJ PHD finger protein EHD3 OS=Oryza sativa subsp. japonica GN=EHD3 PE=1 SV=Length=56 FN2275-S Chr2 13545001 13656000 0 0 Deletion 110999 OsKitaake02g149800 A0A0E0NE26_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=11 FN2275-S Chr2 13545001 13656000 0 0 Deletion 110999 OsKitaake02g149900 PMGT2_TETNG Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 OS=Tetraodon nigrovi FN2275-S Chr2 13545001 13656000 0 0 Deletion 110999 OsKitaake02g150100 A0A0E0NE31_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=36 FN2275-S Chr2 13545001 13656000 0 0 Deletion 110999 OsKitaake02g150150 Hypothetical protein FN2275-S Chr4 12966001 13055000 0 0 Deletion 88999 OsKitaake04g061600 CSPLA_ORYSJ CASP-like protein 2A1 OS=Oryza sativa subsp. japonica GN=Os04g0281900 PE=2 SV=Length=20 FN2275-S Chr4 12966001 13055000 0 0 Deletion 88999 OsKitaake04g061800 A0A0D3FTQ0_9ORYZ Uncharacterized protein OS=Oryza barthii PE=4 SV=Length=23 FN2275-S Chr4 12966001 13055000 0 0 Deletion 88999 OsKitaake04g061900 FLP4_ORYSJ Flowering-promoting factor 1-like protein 4 OS=Oryza sativa subsp. japonica GN=Os04g02824 FN2275-S Chr4 19439001 19448000 0 0 Deletion 8999 OsKitaake04g099601 FRS3_ARATH Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana GN=FRS3 PE=2 SV=Length=85 FN2275-S Chr8 22541001 22558000 0 0 Deletion 16999 OsKitaake08g172700 PME_PRUPE Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=Length=52 FN2275-S Chr8 22541001 22558000 0 0 Deletion 16999 OsKitaake08g172800 PME45_ARATH Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE= FN2275-S Chr8 22541001 22558000 0 0 Deletion 16999 OsKitaake08g172700 PME_PRUPE Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=Length=52 FN2275-S Chr8 22541001 22558000 0 0 Deletion 16999 OsKitaake08g172800 PME45_ARATH Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE= FN2275-S Chr10 9463001 9499000 0 0 Deletion 35999 OsKitaake10g055100 RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=Length=92 FN2275-S Chr10 9463001 9499000 0 0 Deletion 35999 OsKitaake10g055200 Z385D_RAT Zinc finger protein 385D OS=Rattus norvegicus GN=Znf385d PE=2 SV=Length=39 FN2275-S Chr10 9463001 9499000 0 0 Deletion 35999 OsKitaake10g055300 Q339W9_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=LOC_Os10g17750 PE=4 SV=Lengt FN2275-S Chr10 9463001 9499000 0 0 Deletion 35999 OsKitaake10g055200 Z385D_RAT Zinc finger protein 385D OS=Rattus norvegicus GN=Znf385d PE=2 SV=Length=39 FN2275-S Chr10 9463001 9499000 0 0 Deletion 35999 OsKitaake10g055300 Q339W9_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=LOC_Os10g17750 PE=4 SV=Lengt FN2275-S Chr10 9463001 9499000 0 0 Deletion 35999 OsKitaake10g055400 LHP1_ORYSJ Probable chromo domain-containing protein LHP1 OS=Oryza sativa subsp. japonica GN=LHP1 PE FN2275-S Chr10 9572001 9676000 0 0 Deletion 103999 OsKitaake10g055900 Q7XFS0_ORYSJ F-box domain containing protein OS=Oryza sativa subsp. japonica GN=LOC_Os10g17940 PE=4 FN2275-S Chr10 9572001 9676000 0 0 Deletion 103999 OsKitaake10g056100 CRK6_ORYSJ Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica GN=CRK6 PE=1 FN2275-S Chr10 9572001 9676000 0 0 Deletion 103999 OsKitaake10g056200 CDS3_ARATH Phosphatidate cytidylyltransferase 3 OS=Arabidopsis thaliana GN=CDS3 PE=1 SV=Length=47 FN2275-S Chr10 9572001 9676000 0 0 Deletion 103999 OsKitaake10g056300 MD26B_ARATH Probable mediator of RNA polymerase II transcription subunit 26b OS=Arabidopsis thaliana FN2275-S Chr10 9572001 9676000 0 0 Deletion 103999 OsKitaake10g056400 MD26C_ARATH Probable mediator of RNA polymerase II transcription subunit 26c OS=Arabidopsis thaliana FN2275-S Chr10 9572001 9676000 0 0 Deletion 103999 OsKitaake10g056450 LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=Length=127 FN2275-S Chr10 9572001 9676000 0 0 Deletion 103999 OsKitaake10g056500 Q339V3_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=Os10g0327800 PE=2 SV=Length=42 FN2275-S Chr10 9572001 9676000 0 0 Deletion 103999 OsKitaake10g056600 Q8S5Z3_ORYSJ Os10g0328100 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0073L20.14 PE=4 SV=Length FN2275-S Chr11 22323001 22404000 0 0 Deletion 80999 OsKitaake11g177200 TATB_ORYSJ Sec-independent protein translocase protein TATB, chloroplastic OS=Oryza sativa subsp. ja FN2275-S Chr11 22323001 22404000 0 0 Deletion 80999 OsKitaake11g177300 EPFL4_ARATH EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana GN=EPFL4 PE=1 SV=Leng FN2275-S Chr11 22323001 22404000 0 0 Deletion 80999 OsKitaake11g177400 BI1L_ARATH BI1-like protein OS=Arabidopsis thaliana GN=At4g15470 PE=2 SV=Length=25 FN2275-S Chr11 22323001 22404000 0 0 Deletion 80999 OsKitaake11g177500 A0A0P0Y3U9_ORYSJ Os11g0582000 protein OS=Oryza sativa subsp. japonica GN=Os11g0582000 PE=4 SV=Length FN2275-S Chr11 22323001 22404000 0 0 Deletion 80999 OsKitaake11g177400 BI1L_ARATH BI1-like protein OS=Arabidopsis thaliana GN=At4g15470 PE=2 SV=Length=25 FN2275-S Chr11 22323001 22404000 0 0 Deletion 80999 OsKitaake11g177500 A0A0P0Y3U9_ORYSJ Os11g0582000 protein OS=Oryza sativa subsp. japonica GN=Os11g0582000 PE=4 SV=Length FN2275-S Chr11 22323001 22404000 0 0 Deletion 80999 OsKitaake11g177600 RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=Leng FN2275-S Chr1 2542684 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr2 11061909 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake02g129200 AMRA1_MOUSE Activating molecule in BECN1-regulated autophagy protein 1 OS=Mus musculus GN=Ambra1 PE= FN2275-S Chr2 15132648 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr2 15133067 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr2 15133068 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr2 15133069 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr2 28941178 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2275-S Chr2 35908491 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr3 1598693 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2275-S Chr3 7502713 T-A 0 0 Single Base Substitution 0 STOP_GAINED Homo OsKitaake03g104200 P3H2_HUMAN Prolyl 3-hydroxylase 2 OS=Homo sapiens GN=P3H2 PE=1 SV=Length=70 FN2275-S Chr3 12105320 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr3 20179677 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN2275-S Chr4 10956200 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr4 16269523 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr4 18198608 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr4 18241034 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr4 30633819 T-G 0 0 Single Base Substitution 0 INTRON Hetero FN2275-S Chr5 6097035 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN2275-S Chr6 2326229 T-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr6 15296629 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2275-S Chr7 1734530 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake07g024300 A0A0E0Q3Q4_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=77 FN2275-S Chr7 27316885 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN2275-S Chr8 11304057 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr8 11399856 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr9 5531300 T-A 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN2275-S Chr10 6462032 A-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN2275-S Chr10 6589133 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr10 8886734 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr10 10068473 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr10 10208701 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr10 17614047 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr10 20583520 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr11 3930500 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr11 5919530 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Homo FN2275-S Chr11 11963064 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr11 14490790 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr11 18057723 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr12 10389001 T-C 0 0 Single Base Substitution 0 INTRON Hetero FN2275-S Chr12 16468469 G-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2275-S Chr12 26900634 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero