FN2440 Chr1 14308976 14308993 0 0 Deletion 17 INTRON Homo FN2440 Chr1 19170721 19170723 0 0 Deletion 2 INTERGENIC Hetero FN2440 Chr2 5365207 5365213 0 0 Deletion 6 INTRON Hetero FN2440 Chr2 15582909 15582913 0 0 Deletion 4 INTERGENIC Hetero FN2440 Chr2 22434295 22434296 0 0 Deletion 1 FRAME_SHIFT Hetero OsKitaake02g217200 STP5_ARATH Sugar transport protein 5 OS=Arabidopsis thaliana GN=STP5 PE=2 SV=Length=50 FN2440 Chr3 35601978 35601984 0 0 Deletion 6 CODON_DELETION Homo OsKitaake03g390700 SCRL1_ORYSJ SCAR-like protein 1 OS=Oryza sativa subsp. japonica GN=Os03g0816900 PE=2 SV=Length=209 FN2440 Chr4 8227378 8227391 0 0 Deletion 13 INTERGENIC Hetero FN2440 Chr4 29463945 29463946 0 0 Deletion 1 INTERGENIC Homo FN2440 Chr4 33192033 33192034 0 0 Deletion 1 INTRON Homo FN2440 Chr5 25818530 25818533 0 0 Deletion 3 UTR_3_PRIME Hetero FN2440 Chr6 5223394 5223406 0 0 Deletion 12 INTERGENIC Hetero FN2440 Chr7 7069809 7069811 0 0 Deletion 2 INTERGENIC Hetero FN2440 Chr7 12568956 12568957 0 0 Deletion 1 INTERGENIC Homo FN2440 Chr8 28537243 28537244 0 0 Deletion 1 FRAME_SHIFT Homo OsKitaake08g243000 Q6Z3H1_ORYSJ Os08g0552100 protein OS=Oryza sativa subsp. japonica GN=Os08g0552100 PE=4 SV=Length=23 FN2440 Chr9 14054278 14054283 0 0 Deletion 5 INTERGENIC Homo FN2440 Chr9 21110796 21110799 0 0 Deletion 3 INTRON Hetero FN2440 Chr10 2186025 2186027 0 0 Deletion 2 INTERGENIC Hetero FN2440 Chr10 2496654 2496655 0 0 Deletion 1 INTERGENIC Hetero FN2440 Chr10 17868974 17868983 0 0 Deletion 9 CODON_CHANGE_PLUS_CODON_DELETION Hetero OsKitaake10g124200 WDR70_XENTR WD repeat-containing protein 70 OS=Xenopus tropicalis GN=wdr70 PE=2 SV=Length=62 FN2440 Chr10 22521662 22521664 0 0 Deletion 2 FRAME_SHIFT Homo OsKitaake10g186000 GT19_ARATH Probable xyloglucan galactosyltransferase GT19 OS=Arabidopsis thaliana GN=GT19 PE=2 SV=Le FN2440 Chr11 25504979 25504980 0 0 Deletion 1 UTR_5_PRIME Homo FN2440 Chr12 11807341 11807349 0 0 Deletion 8 INTERGENIC Hetero FN2440 Chr1 4457562 4457562 0 0 Insertion 2 INTERGENIC Hetero FN2440 Chr2 30602361 30602361 0 0 Insertion 3 INTERGENIC Hetero FN2440 Chr3 32383879 32383879 0 0 Insertion 7 INTERGENIC Hetero FN2440 Chr3 36875107 36875107 0 0 Insertion 6 INTERGENIC Hetero FN2440 Chr4 30509641 30509641 0 0 Insertion 2 INTERGENIC Homo FN2440 Chr5 27239372 27239372 0 0 Insertion 2 INTERGENIC Hetero FN2440 Chr10 17408850 17408850 0 0 Insertion 2 INTERGENIC Hetero FN2440 Chr7 5687440 Chr3 24855962 0 Translocation 0 Hetero OsKitaake07g069100 PGLR_ACTDE Polygalacturonase OS=Actinidia deliciosa PE=2 SV=Length=46 FN2440 Chr7 5687443 Chr3 24857797 0 Translocation 0 Hetero OsKitaake07g069100 PGLR_ACTDE Polygalacturonase OS=Actinidia deliciosa PE=2 SV=Length=46 FN2440 Chr7 5687440 Chr3 24855962 0 Translocation 0 Hetero OsKitaake03g264450 Hypothetical protein FN2440 Chr5 15633811 Chr1 40185439 0 Translocation 0 Hetero FN2440 Chr6 16211945 Chr5 4943966 0 Translocation 0 Hetero FN2440 Chr11 17536419 Chr5 14975424 0 Translocation 0 Hetero FN2440 Chr11 17536441 Chr5 14974495 0 Translocation 0 Hetero FN2440 Chr5 14975447 15949552 0 0 Inversion 0 Homo FN2440 Chr5 15941322 15942235 0 0 Inversion 0 Homo FN2440 Chr5 15942237 16241726 0 0 Inversion 0 Homo FN2440 Chr7 20274913 20434527 0 0 Inversion 0 Hetero FN2440 Chr3 23938001 23976000 0 0 Deletion 37999 OsKitaake03g256700 Q6AU15_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g41920 PE=4 SV=Length=33 FN2440 Chr5 15985001 16242000 0 0 Deletion 256999 OsKitaake05g122700 A0A0P0WL17_ORYSJ Os05g0341100 protein OS=Oryza sativa subsp. japonica GN=Os05g0341100 PE=4 SV=Length FN2440 Chr5 15985001 16242000 0 0 Deletion 256999 OsKitaake05g122701 A0A0E0PKZ4_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=18 FN2440 Chr5 15985001 16242000 0 0 Deletion 256999 OsKitaake05g122900 GPA1_ORYSJ Guanine nucleotide-binding protein alpha-1 subunit OS=Oryza sativa subsp. japonica GN=GPA FN2440 Chr5 15985001 16242000 0 0 Deletion 256999 OsKitaake05g123000 RAB21_MOUSE Ras-related protein Rab-21 OS=Mus musculus GN=Rab21 PE=1 SV=Length=22 FN2440 Chr5 15985001 16242000 0 0 Deletion 256999 OsKitaake05g123200 A0A0E0PKZ8_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=37 FN2440 Chr5 15985001 16242000 0 0 Deletion 256999 OsKitaake05g123300 Q5W6P5_ORYSJ Os05g0341900 protein OS=Oryza sativa subsp. japonica GN=Os05g0341900 PE=4 SV=Length=52 FN2440 Chr5 15985001 16242000 0 0 Deletion 256999 OsKitaake05g123400 SAG20_ARATH Senescence associated gene 20 OS=Arabidopsis thaliana GN=SAG20 PE=2 SV=Length=11 FN2440 Chr5 15985001 16242000 0 0 Deletion 256999 OsKitaake05g123500 SAG20_ARATH Senescence associated gene 20 OS=Arabidopsis thaliana GN=SAG20 PE=2 SV=Length=11 FN2440 Chr5 15985001 16242000 0 0 Deletion 256999 OsKitaake05g123600 Hypothetical protein FN2440 Chr5 15985001 16242000 0 0 Deletion 256999 OsKitaake05g123700 A2Y3E1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19526 PE=4 SV=Len FN2440 Chr5 15985001 16242000 0 0 Deletion 256999 OsKitaake05g123800 A0A0E0RFW4_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=14 FN2440 Chr5 15985001 16242000 0 0 Deletion 256999 OsKitaake05g123900 WRK24_ORYSI WRKY transcription factor WRKY24 OS=Oryza sativa subsp. indica GN=WRKY24 PE=2 SV=Length= FN2440 Chr5 15985001 16242000 0 0 Deletion 256999 OsKitaake05g123901 RNHX1_ARATH Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana GN=At1g65750 PE=3 SV=L FN2440 Chr5 15985001 16242000 0 0 Deletion 256999 OsKitaake05g124000 Q5W6M6_ORYSJ Os05g0343800 protein OS=Oryza sativa subsp. japonica GN=Os05g0343800 PE=4 SV=Length=7 FN2440 Chr5 15985001 16242000 0 0 Deletion 256999 OsKitaake05g124100 ERD15_ARATH Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana GN=ERD15 PE=1 SV=Leng FN2440 Chr5 15985001 16242000 0 0 Deletion 256999 OsKitaake05g124200 CSPLG_ORYSJ CASP-like protein 4B4 OS=Oryza sativa subsp. japonica GN=Os05g0344400 PE=3 SV=Length=20 FN2440 Chr7 12547001 12572000 0 0 Deletion 24999 OsKitaake07g112100 TI442_ARATH Mitochondrial import inner membrane translocase subunit TIM44-2 OS=Arabidopsis thaliana FN2440 Chr7 12547001 12572000 0 0 Deletion 24999 OsKitaake07g112200 CDPKI_ORYSJ Calcium-dependent protein kinase 18 OS=Oryza sativa subsp. japonica GN=CPK18 PE=1 SV=Len FN2440 Chr7 12547001 12572000 0 0 Deletion 24999 OsKitaake07g112300 ODP23_ARATH Dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase comp FN2440 Chr1 6119454 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr1 8120984 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr1 11817740 G-C 0 0 Single Base Substitution 0 INTRON Hetero FN2440 Chr1 11945350 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr1 29991584 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr1 37579933 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr1 40192831 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr2 3269601 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN2440 Chr2 16984780 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr2 25087419 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr2 32642797 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr2 35618866 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr3 3306250 T-A 0 0 Single Base Substitution 0 INTRON Hetero FN2440 Chr3 10512488 A-C 0 0 Single Base Substitution 0 INTRON Hetero FN2440 Chr3 11778039 C-T 0 0 Single Base Substitution 0 INTRON Homo FN2440 Chr3 15365804 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2440 Chr3 24472322 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr4 4154642 A-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr4 6257082 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr4 9386510 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN2440 Chr4 10750622 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr4 20849127 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr4 23801682 A-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN2440 Chr4 24493313 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr5 244902 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr5 2169103 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr5 6838991 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr5 9401498 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr5 9660739 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2440 Chr5 15394367 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr5 21826514 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr5 27037007 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr6 4517310 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake06g062300 GLR25_ARATH Glutamate receptor 2.5 OS=Arabidopsis thaliana GN=GLR2.5 PE=2 SV=Length=91 FN2440 Chr6 8324691 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr6 11444733 G-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN2440 Chr6 14137949 G-A 0 0 Single Base Substitution 0 INTRON Hetero FN2440 Chr6 30736393 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr6 30853855 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr7 3105107 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr7 3143991 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN2440 Chr7 8385530 T-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN2440 Chr7 10394216 T-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr8 5455740 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN2440 Chr8 28536951 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo OsKitaake08g243000 Q6Z3H1_ORYSJ Os08g0552100 protein OS=Oryza sativa subsp. japonica GN=Os08g0552100 PE=4 SV=Length=23 FN2440 Chr9 16153619 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr10 13215350 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr10 15457882 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2440 Chr10 17352985 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN2440 Chr10 19579485 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake10g144100 B9G6F6_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_32016 PE=4 SV=Length=36 FN2440 Chr10 21386829 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr11 4725915 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr11 8652319 A-G 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN2440 Chr11 15440042 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2440 Chr11 21148606 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2440 Chr11 23579114 A-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN2440 Chr11 25574075 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN2440 Chr11 27180268 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2440 Chr11 29320142 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero