FN2609-S Chr1 5036025 5036047 0 0 Deletion 22 INTERGENIC Homo FN2609-S Chr1 18356589 18356594 0 0 Deletion 5 INTRON Homo FN2609-S Chr1 19955084 19955085 0 0 Deletion 1 INTERGENIC Homo FN2609-S Chr1 31122248 31122254 0 0 Deletion 6 CODON_DELETION Hetero OsKitaake01g310500 A0A0D9YEF7_9ORYZ Uncharacterized protein OS=Oryza glumipatula PE=4 SV=Length=8 FN2609-S Chr1 39077703 39077704 0 0 Deletion 1 INTERGENIC Hetero FN2609-S Chr1 39444555 39444566 0 0 Deletion 11 INTERGENIC Hetero FN2609-S Chr2 27687108 27687113 0 0 Deletion 5 FRAME_SHIFT Hetero OsKitaake02g278000 UGGG_ARATH UDP-glucose:glycoprotein glucosyltransferase OS=Arabidopsis thaliana GN=UGGT PE=1 SV=Leng FN2609-S Chr2 33320242 33320248 0 0 Deletion 6 UTR_3_PRIME Hetero FN2609-S Chr3 3735830 3735832 0 0 Deletion 2 INTERGENIC Hetero FN2609-S Chr3 14009429 14009437 0 0 Deletion 8 INTERGENIC Hetero FN2609-S Chr6 1030482 1030484 0 0 Deletion 2 INTERGENIC Hetero FN2609-S Chr6 3959690 3959692 0 0 Deletion 2 INTERGENIC Homo FN2609-S Chr6 4044622 4044625 0 0 Deletion 3 INTERGENIC Homo FN2609-S Chr6 11844526 11844537 0 0 Deletion 11 INTERGENIC Hetero FN2609-S Chr6 14021317 14021318 0 0 Deletion 1 INTERGENIC Hetero FN2609-S Chr6 16448459 16448469 0 0 Deletion 10 INTERGENIC Hetero FN2609-S Chr8 9332544 9332545 0 0 Deletion 1 INTERGENIC Homo FN2609-S Chr8 18215477 18215487 0 0 Deletion 10 INTERGENIC Homo FN2609-S Chr8 21363121 21363146 0 0 Deletion 25 UTR_3_PRIME Hetero FN2609-S Chr8 21852556 21852560 0 0 Deletion 4 INTERGENIC Hetero FN2609-S Chr9 15779259 15779272 0 0 Deletion 13 FRAME_SHIFT Homo OsKitaake09g112500 Q69LK9_ORYSJ Os09g0436600 protein OS=Oryza sativa subsp. japonica GN=Os09g0436600 PE=2 SV=Length=25 FN2609-S Chr11 3043937 3043944 0 0 Deletion 7 INTERGENIC Homo FN2609-S Chr11 6205577 6205579 0 0 Deletion 2 INTERGENIC Hetero FN2609-S Chr12 10500739 10500740 0 0 Deletion 1 INTERGENIC Homo FN2609-S Chr5 16074502 16074502 0 0 Insertion 2 INTERGENIC Hetero FN2609-S Chr11 12481270 12481279 0 0 Deletion 9 Hetero 0 FN2609-S Chr12 1677486 1677486 0 0 Insertion 2 Hetero OsKitaake12g025300 ZIFL1_ARATH Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=Length= FN2609-S Chr10 4947470 Chr4 1390574 0 Translocation 0 Homo FN2609-S Chr1 10466165 10684213 0 0 Inversion 0 Homo OsKitaake01g130800 PPOC_ORYSJ Protoporphyrinogen oxidase, chloroplastic OS=Oryza sativa subsp. japonica GN=PPOX1 PE=2 S FN2609-S Chr1 10466227 10684220 0 0 Inversion 0 Homo OsKitaake01g130800 PPOC_ORYSJ Protoporphyrinogen oxidase, chloroplastic OS=Oryza sativa subsp. japonica GN=PPOX1 PE=2 S FN2609-S Chr2 5638827 6202048 0 0 Inversion 0 Homo OsKitaake02g077800 A0A0E0NB96_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=37 FN2609-S Chr9 16895223 16904927 0 0 Inversion 0 Homo OsKitaake09g125300 TCAB4_TULGE Probable tuliposide A-converting enzyme b6, amyloplastic OS=Tulipa gesneriana GN=TCEA-B6 FN2609-S Chr9 16895257 16904938 0 0 Inversion 0 Homo OsKitaake09g125300 TCAB4_TULGE Probable tuliposide A-converting enzyme b6, amyloplastic OS=Tulipa gesneriana GN=TCEA-B6 FN2609-S Chr1 10466165 10684213 0 0 Inversion 0 Homo OsKitaake01g132400 LCYD2_ORYSJ Putative L-cysteine desulfhydrase 2 OS=Oryza sativa subsp. japonica GN=Os01g0290600 PE=3 FN2609-S Chr1 10466227 10684220 0 0 Inversion 0 Homo OsKitaake01g132400 LCYD2_ORYSJ Putative L-cysteine desulfhydrase 2 OS=Oryza sativa subsp. japonica GN=Os01g0290600 PE=3 FN2609-S Chr4 1392508 1398994 0 0 Inversion 0 Homo FN2609-S Chr1 39930001 39956000 0 0 Deletion 25999 OsKitaake01g431900 SEP15_BOVIN Selenoprotein F OS=Bos taurus GN=SELENOF PE=2 SV=Length=16 FN2609-S Chr1 39930001 39956000 0 0 Deletion 25999 OsKitaake01g432000 MARH2_XENLA E3 ubiquitin-protein ligase MARCH2 OS=Xenopus laevis GN=march2 PE=2 SV=Length=24 FN2609-S Chr1 39930001 39956000 0 0 Deletion 25999 OsKitaake01g432100 TIG_SYNP2 Trigger factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=tig PE=3 SV=L FN2609-S Chr1 39930001 39956000 0 0 Deletion 25999 OsKitaake01g432150 A0A0E0N667_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=7 FN2609-S Chr1 39930001 39956000 0 0 Deletion 25999 OsKitaake01g432200 IM30_ORYSJ Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza sativa subsp. japonic FN2609-S Chr1 39930001 39956000 0 0 Deletion 25999 OsKitaake01g432300 B561K_ARATH Cytochrome b561 and DOMON domain-containing protein At3g07570 OS=Arabidopsis thaliana GN FN2609-S Chr6 12455001 12572000 0 0 Deletion 116999 OsKitaake06g133400 A0A0E0PX08_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=16 FN2609-S Chr6 12455001 12572000 0 0 Deletion 116999 OsKitaake06g133500 A0A0E0PX09_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=14 FN2609-S Chr6 12455001 12572000 0 0 Deletion 116999 OsKitaake06g133600 B9FSY8_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_21136 PE=4 SV=Length=11 FN2609-S Chr6 12455001 12572000 0 0 Deletion 116999 OsKitaake06g133650 Q2QTV2_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os12g18410 PE=4 SV=Length=16 FN2609-S Chr6 12455001 12572000 0 0 Deletion 116999 OsKitaake06g133700 A3BB59_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_21137 PE=4 SV=Length=12 FN2609-S Chr6 12455001 12572000 0 0 Deletion 116999 OsKitaake06g133800 Q5Z4P8_ORYSJ Os06g0317200 protein OS=Oryza sativa subsp. japonica GN=B1156C07.45-2 PE=2 SV=Length=14 FN2609-S Chr6 12455001 12572000 0 0 Deletion 116999 OsKitaake06g133900 A0A0E0PX14_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=15 FN2609-S Chr6 12455001 12572000 0 0 Deletion 116999 OsKitaake06g134000 A0A0D3GFW8_9ORYZ Uncharacterized protein OS=Oryza barthii PE=4 SV=Length=16 FN2609-S Chr6 12455001 12572000 0 0 Deletion 116999 OsKitaake06g134100 B9FSZ1_ORYSJ Os06g0317850 protein OS=Oryza sativa subsp. japonica GN=Os06g0317850 PE=4 SV=Length=8 FN2609-S Chr6 12455001 12572000 0 0 Deletion 116999 OsKitaake06g134200 Y2474_ARATH BTB/POZ domain-containing protein At2g04740 OS=Arabidopsis thaliana GN=At2g04740 PE=2 SV FN2609-S Chr6 12589001 12628000 0 0 Deletion 38999 OsKitaake06g134400 NHX4_ARATH Sodium/hydrogen exchanger 4 OS=Arabidopsis thaliana GN=NHX4 PE=2 SV=Length=52 FN2609-S Chr6 12589001 12628000 0 0 Deletion 38999 OsKitaake06g134500 B9FSZ3_ORYSJ Os06g0318533 protein OS=Oryza sativa subsp. japonica GN=Os06g0318533 PE=4 SV=Length=9 FN2609-S Chr6 12589001 12628000 0 0 Deletion 38999 OsKitaake06g134600 CTPA3_ARATH Carboxyl-terminal-processing peptidase 3, chloroplastic OS=Arabidopsis thaliana GN=CTPA3 FN2609-S Chr6 12589001 12628000 0 0 Deletion 38999 OsKitaake06g134650 A0A0P0WW57_ORYSJ Os06g0318650 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os06g0318650 PE= FN2609-S Chr6 12589001 12628000 0 0 Deletion 38999 OsKitaake06g134700 C3H41_ORYSJ E3 ubiquitin-protein ligase makorin OS=Oryza sativa subsp. japonica GN=MKRN PE=2 SV=Leng FN2609-S Chr6 12589001 12628000 0 0 Deletion 38999 OsKitaake06g134650 A0A0P0WW57_ORYSJ Os06g0318650 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os06g0318650 PE= FN2609-S Chr6 12589001 12628000 0 0 Deletion 38999 OsKitaake06g134700 C3H41_ORYSJ E3 ubiquitin-protein ligase makorin OS=Oryza sativa subsp. japonica GN=MKRN PE=2 SV=Leng FN2609-S Chr6 12589001 12628000 0 0 Deletion 38999 OsKitaake06g134800 A0A0E0PX28_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=6 FN2609-S Chr6 12589001 12628000 0 0 Deletion 38999 OsKitaake06g134850 Hypothetical protein FN2609-S Chr6 12589001 12628000 0 0 Deletion 38999 OsKitaake06g134900 AGP23_ARATH Arabinogalactan peptide 23 OS=Arabidopsis thaliana GN=AGP23 PE=2 SV=Length=6 FN2609-S Chr6 12589001 12628000 0 0 Deletion 38999 OsKitaake06g134950 Hypothetical protein FN2609-S Chr1 6276694 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr1 12971624 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr1 17522900 G-T 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN2609-S Chr1 25016945 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr1 25698793 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr1 30650836 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr1 42302327 T-C 0 0 Single Base Substitution 0 INTRON Hetero FN2609-S Chr2 5766891 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr2 16802177 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr2 18318002 C-T 0 0 Single Base Substitution 0 UTR_5_PRIME Hetero FN2609-S Chr2 26923277 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr2 26953164 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake02g268900 CLSY3_ARATH SNF2 domain-containing protein CLASSY 3 OS=Arabidopsis thaliana GN=CLSY3 PE=1 SV=Length= FN2609-S Chr3 6721120 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2609-S Chr3 9060751 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr3 10707442 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr3 19580993 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr3 22122358 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr4 4809681 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr4 18303807 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr4 22928478 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr4 23340586 T-C 0 0 Single Base Substitution 0 INTRON Hetero FN2609-S Chr4 25062569 T-C 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN2609-S Chr4 28491405 A-G 0 0 Single Base Substitution 0 INTRON Homo FN2609-S Chr5 256917 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr5 1396666 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr5 7380501 A-T 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN2609-S Chr5 7655117 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN2609-S Chr5 7779761 T-A 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN2609-S Chr5 10030031 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr5 11388696 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr5 24130470 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr5 25377456 C-G 0 0 Single Base Substitution 0 INTRON Hetero FN2609-S Chr6 4045009 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN2609-S Chr6 7718719 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2609-S Chr6 8759146 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr7 6437917 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr7 12469774 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr7 19106278 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr7 19364783 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr7 27095393 T-C 0 0 Single Base Substitution 0 INTRON Homo FN2609-S Chr7 29009193 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN2609-S Chr9 44671 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr9 2703731 G-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr9 10274767 C-T 0 0 Single Base Substitution 0 INTRON Hetero FN2609-S Chr9 17981767 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2609-S Chr11 10368525 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr11 12307650 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr11 12446441 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN2609-S Chr11 16860320 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr12 9199694 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2609-S Chr12 10701642 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN2609-S Chr12 20547400 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero