FN2664-S Chr1 9969936 9969943 0 0 Deletion 7 INTERGENIC Hetero FN2664-S Chr1 10234294 10234296 0 0 Deletion 2 INTRON Hetero FN2664-S Chr1 13846546 13846548 0 0 Deletion 2 INTERGENIC Hetero FN2664-S Chr1 13861643 13861644 0 0 Deletion 1 INTERGENIC Hetero FN2664-S Chr1 14194187 14194190 0 0 Deletion 3 INTERGENIC Hetero FN2664-S Chr1 22874145 22874146 0 0 Deletion 1 INTERGENIC Hetero FN2664-S Chr1 26832388 26832390 0 0 Deletion 2 INTERGENIC Hetero FN2664-S Chr1 34875775 34875785 0 0 Deletion 10 INTERGENIC Homo FN2664-S Chr1 38472405 38472408 0 0 Deletion 3 CODON_DELETION Homo OsKitaake01g410900 LHW_ARATH Transcription factor LHW OS=Arabidopsis thaliana GN=LHW PE=1 SV=Length=65 FN2664-S Chr1 40466482 40466483 0 0 Deletion 1 INTERGENIC Hetero FN2664-S Chr2 3798409 3798410 0 0 Deletion 1 FRAME_SHIFT Homo OsKitaake02g055000 Q0E3K5_ORYSJ Os02g0169000 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os02g0169000 PE=4 SV FN2664-S Chr4 2098943 2098963 0 0 Deletion 20 INTERGENIC Hetero FN2664-S Chr4 6157414 6157428 0 0 Deletion 14 INTERGENIC Hetero FN2664-S Chr4 33076241 33076243 0 0 Deletion 2 INTERGENIC Hetero FN2664-S Chr6 10752386 10752389 0 0 Deletion 3 INTERGENIC Hetero FN2664-S Chr6 10841326 10841333 0 0 Deletion 7 INTERGENIC Hetero FN2664-S Chr6 26526491 26526498 0 0 Deletion 7 UTR_3_PRIME Homo FN2664-S Chr7 377186 377200 0 0 Deletion 14 FRAME_SHIFT Hetero OsKitaake07g003400 KN14N_ORYSJ Kinesin-like protein KIN-14N OS=Oryza sativa subsp. japonica GN=KIN14N PE=2 SV=Length=76 FN2664-S Chr7 27428493 27428499 0 0 Deletion 6 CODON_CHANGE_PLUS_CODON_DELETION Hetero OsKitaake07g255000 B9FUL5_ORYSJ Os07g0653900 protein OS=Oryza sativa subsp. japonica GN=Os07g0653900 PE=4 SV=Length=97 FN2664-S Chr9 1006091 1006099 0 0 Deletion 8 INTERGENIC Hetero FN2664-S Chr11 18977210 18977216 0 0 Deletion 6 INTERGENIC Hetero FN2664-S Chr11 28608425 28608439 0 0 Deletion 14 INTERGENIC Hetero FN2664-S Chr12 17554868 17554871 0 0 Deletion 3 CODON_CHANGE_PLUS_CODON_DELETION Hetero OsKitaake12g129300 Q2QQU6_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=LOC_Os12g29820 PE=4 SV=Lengt FN2664-S Chr3 16285087 16285087 0 0 Insertion 2 UTR_5_PRIME Hetero FN2664-S Chr4 30011536 30011536 0 0 Insertion 2 INTRON Hetero FN2664-S Chr6 7853292 7853292 0 0 Insertion 2 INTERGENIC Hetero FN2664-S Chr10 14440429 14440429 0 0 Insertion 5 INTERGENIC Hetero FN2664-S Chr12 23648515 23648515 0 0 Insertion 4 INTERGENIC Homo FN2664-S Chr7 561549 Chr6 30816767 0 Translocation 0 Hetero FN2664-S Chr2 29736729 29842770 0 0 Inversion 0 Hetero OsKitaake02g300700 PAE8_ARATH Pectin acetylesterase 8 OS=Arabidopsis thaliana GN=PAE8 PE=2 SV=Length=39 FN2664-S Chr2 29736730 29842777 0 0 Inversion 0 Hetero OsKitaake02g300700 PAE8_ARATH Pectin acetylesterase 8 OS=Arabidopsis thaliana GN=PAE8 PE=2 SV=Length=39 FN2664-S Chr12 26501985 26815785 0 0 Inversion 0 Hetero FN2664-S Chr12 26639543 26815780 0 0 Inversion 0 Hetero FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g291500 EHD2_ARATH EH domain-containing protein 2 OS=Arabidopsis thaliana GN=EHD2 PE=1 SV=Length=54 FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g291600 RVE2_ARATH Protein REVEILLE 2 OS=Arabidopsis thaliana GN=RVE2 PE=2 SV=Length=28 FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g291700 CALS3_ARATH Callose synthase 3 OS=Arabidopsis thaliana GN=CALS3 PE=3 SV=Length=195 FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g291900 PSY_MAIZE Phytoene synthase, chloroplastic OS=Zea mays GN=Y1 PE=3 SV=Length=41 FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g292000 AGO1D_ORYSJ Protein argonaute 1D OS=Oryza sativa subsp. japonica GN=AGO1D PE=2 SV=Length=103 FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g292100 GASA3_ARATH Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3 PE=2 SV=Length=9 FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g292200 A0A0P0X1G5_ORYSJ Os06g0729500 protein OS=Oryza sativa subsp. japonica GN=Os06g0729500 PE=4 SV=Length FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g292100 GASA3_ARATH Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3 PE=2 SV=Length=9 FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g292200 A0A0P0X1G5_ORYSJ Os06g0729500 protein OS=Oryza sativa subsp. japonica GN=Os06g0729500 PE=4 SV=Length FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g292300 P2SAF_ORYSJ Photosystem II stability/assembly factor HCF136, chloroplastic OS=Oryza sativa subsp. ja FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g292400 IPT9_ARATH tRNA dimethylallyltransferase 9 OS=Arabidopsis thaliana GN=IPT9 PE=2 SV=Length=46 FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g292500 LYSM1_HUMAN LysM and putative peptidoglycan-binding domain-containing protein 1 OS=Homo sapiens GN=L FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g292600 SCP34_ARATH Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana GN=SCPL34 PE=2 SV=Length=49 FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g292701 A0A0P0X1V0_ORYSJ Os06g0730150 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os06g0730150 PE= FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g292800 RHL1_ARATH DNA-binding protein RHL1 OS=Arabidopsis thaliana GN=RHL1 PE=1 SV=Length=35 FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g292900 TMM53_BOVIN Transmembrane protein 53 OS=Bos taurus GN=TMEM53 PE=2 SV=Length=29 FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g293000 A0A0D3GL50_9ORYZ Gamma-tubulin complex component OS=Oryza barthii PE=3 SV=Length=17 FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g293100 DAPB1_PSEMX Dipeptidyl aminopeptidase BI OS=Pseudoxanthomonas mexicana GN=dapb1 PE=1 SV=Length=72 FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g293200 CCD12_MOUSE Coiled-coil domain-containing protein 12 OS=Mus musculus GN=Ccdc12 PE=1 SV=Length=16 FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g293300 SIPL5_ORYSJ Signal peptide peptidase-like 5 OS=Oryza sativa subsp. japonica GN=SPPL5 PE=2 SV=Length= FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g293400 Q5Z412_ORYSJ Putative glycine-rich protein 1 OS=Oryza sativa subsp. japonica GN=B1206D04.14 PE=4 SV= FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g293500 IDM1_ARATH Increased DNA methylation 1 OS=Arabidopsis thaliana GN=IDM1 PE=1 SV=Length=118 FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g293600 WBC30_ARATH Putative white-brown complex homolog protein 30 OS=Arabidopsis thaliana GN=WBC30 PE=1 SV FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g293700 A0A0D3GL59_9ORYZ Uncharacterized protein OS=Oryza barthii PE=4 SV=Length=16 FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g293800 TET18_ARATH Tetraspanin-18 OS=Arabidopsis thaliana GN=TOM2AH2 PE=1 SV=Length=27 FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g293900 KDM5_DROME Lysine-specific demethylase lid OS=Drosophila melanogaster GN=lid PE=1 SV=Length=183 FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g294000 A0A0E0Q300_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=61 FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g294100 CLC2_ORYSJ Clathrin light chain 2 OS=Oryza sativa subsp. japonica GN=Os06g0731800 PE=2 SV=Length=29 FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g294200 A0A0E0HW00_ORYNI Uncharacterized protein OS=Oryza nivara PE=4 SV=Length=36 FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g294300 B9FR31_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_22756 PE=4 SV=Length=6 FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g294500 Q5Z3Z9_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=B1206D04.28 PE=4 SV=Length=2 FN2664-S Chr6 30814001 31032000 0 0 Deletion 217999 OsKitaake06g294600 RL35_EUPES 60S ribosomal protein L35 OS=Euphorbia esula GN=RPL35 PE=2 SV=Length=12 FN2664-S Chr1 5217807 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr1 11111998 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr1 16859770 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN2664-S Chr1 21269450 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake01g207400 A0A0D3EQ29_9ORYZ Uncharacterized protein OS=Oryza barthii PE=4 SV=Length=24 FN2664-S Chr1 26454356 G-A 0 0 Single Base Substitution 0 INTRON Hetero FN2664-S Chr1 29805496 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2664-S Chr2 552826 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr2 1893669 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr2 19203668 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr2 23449799 G-A 0 0 Single Base Substitution 0 INTRON Homo FN2664-S Chr2 30793152 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr3 9818600 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2664-S Chr3 14862939 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr3 16319223 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr3 20437513 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr3 24462733 A-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr3 26211941 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr3 28090167 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr3 29093963 G-A 0 0 Single Base Substitution 0 INTRON Hetero FN2664-S Chr3 33767175 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN2664-S Chr4 24168851 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr4 29552151 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr4 33726741 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr4 36096254 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr5 4768784 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN2664-S Chr5 6424900 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr5 7353186 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr5 10961396 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr5 13807735 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr5 17893339 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr5 24784085 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2664-S Chr6 2209418 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN2664-S Chr6 8681977 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr6 11878754 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr6 18914537 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN2664-S Chr6 29099135 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake06g268500 SRRT_ARATH Serrate RNA effector molecule OS=Arabidopsis thaliana GN=SE PE=1 SV=Length=72 FN2664-S Chr7 4558027 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr7 11316426 G-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr7 15772614 G-A 0 0 Single Base Substitution 0 INTRON Hetero FN2664-S Chr7 25174983 C-T 0 0 Single Base Substitution 0 INTRON Hetero FN2664-S Chr8 9982 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr8 7232371 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr8 8097233 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr8 10105034 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr8 10939522 A-T 0 0 Single Base Substitution 0 INTRON Hetero FN2664-S Chr9 996418 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr9 3451879 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr9 4805287 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr9 9081614 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr9 18725819 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr9 20050155 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr10 1423822 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr10 1423827 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr10 21440815 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr10 22209361 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr11 11522354 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr11 12286166 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr11 19653389 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake11g153500 FDL1_ARATH F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana GN=At1g13570 PE=2 SV=Lengt FN2664-S Chr11 24688007 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr12 3004473 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr12 4807192 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2664-S Chr12 9930230 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo