FN2666-S Chr1 17689405 17689406 0 0 Deletion 1 INTERGENIC Hetero FN2666-S Chr1 19052801 19052804 0 0 Deletion 3 INTERGENIC Hetero FN2666-S Chr1 21064595 21064598 0 0 Deletion 3 INTERGENIC Hetero FN2666-S Chr2 8037344 8037345 0 0 Deletion 1 INTERGENIC Homo FN2666-S Chr3 3819895 3819901 0 0 Deletion 6 UTR_3_PRIME Hetero FN2666-S Chr3 26898319 26898321 0 0 Deletion 2 INTERGENIC Hetero FN2666-S Chr3 28206207 28206214 0 0 Deletion 7 INTRON Hetero FN2666-S Chr3 31485174 31485194 0 0 Deletion 20 FRAME_SHIFT Homo OsKitaake03g331700 LOX2_ORYSJ Linoleate 9S-lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=Length=87 FN2666-S Chr5 9830995 9831003 0 0 Deletion 8 INTRON Hetero FN2666-S Chr5 21097628 21097645 0 0 Deletion 17 INTRON Homo FN2666-S Chr6 23952387 23952392 0 0 Deletion 5 INTERGENIC Homo FN2666-S Chr6 25484165 25484174 0 0 Deletion 9 INTRON Homo FN2666-S Chr7 675913 675921 0 0 Deletion 8 FRAME_SHIFT Hetero OsKitaake07g008100 A0A0E0Q3A1_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=12 FN2666-S Chr7 11800179 11800188 0 0 Deletion 9 INTERGENIC Homo FN2666-S Chr8 5157873 5157874 0 0 Deletion 1 INTERGENIC Hetero FN2666-S Chr8 8908852 8908853 0 0 Deletion 1 INTERGENIC Hetero FN2666-S Chr9 7120350 7120351 0 0 Deletion 1 INTRON Homo FN2666-S Chr11 18297324 18297326 0 0 Deletion 2 INTERGENIC Hetero FN2666-S Chr12 11416321 11416329 0 0 Deletion 8 INTERGENIC Hetero FN2666-S Chr1 12899215 12899221 0 0 Deletion 6 INTERGENIC Hetero FN2666-S Chr1 17689405 17689406 0 0 Deletion 1 INTERGENIC Hetero FN2666-S Chr1 19052801 19052804 0 0 Deletion 3 INTERGENIC Hetero FN2666-S Chr1 21009735 21009741 0 0 Deletion 6 INTERGENIC Hetero FN2666-S Chr1 21064595 21064598 0 0 Deletion 3 INTERGENIC Hetero FN2666-S Chr1 29243899 29243910 0 0 Deletion 11 INTERGENIC Hetero FN2666-S Chr2 8037344 8037345 0 0 Deletion 1 INTERGENIC Homo FN2666-S Chr3 2029168 2029189 0 0 Deletion 21 CODON_DELETION Hetero OsKitaake03g029000 GSTFB_ARATH Glutathione S-transferase F11 OS=Arabidopsis thaliana GN=GSTF11 PE=2 SV=Length=21 FN2666-S Chr3 3819895 3819901 0 0 Deletion 6 UTR_3_PRIME Hetero FN2666-S Chr3 10914123 10914129 0 0 Deletion 6 INTERGENIC Hetero FN2666-S Chr3 21342576 21342577 0 0 Deletion 1 INTERGENIC Hetero FN2666-S Chr3 21926839 21926840 0 0 Deletion 1 INTRON Hetero FN2666-S Chr3 26898319 26898321 0 0 Deletion 2 INTERGENIC Hetero FN2666-S Chr3 28206207 28206214 0 0 Deletion 7 INTRON Hetero FN2666-S Chr3 28944619 28944636 0 0 Deletion 17 INTERGENIC Hetero FN2666-S Chr3 31485174 31485194 0 0 Deletion 20 FRAME_SHIFT Homo OsKitaake03g331700 LOX2_ORYSJ Linoleate 9S-lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=Length=87 FN2666-S Chr4 2957176 2957180 0 0 Deletion 4 INTERGENIC Hetero FN2666-S Chr4 11442200 11442207 0 0 Deletion 7 INTERGENIC Homo FN2666-S Chr4 17450622 17450626 0 0 Deletion 4 INTERGENIC Hetero FN2666-S Chr4 18239578 18239580 0 0 Deletion 2 INTERGENIC Hetero FN2666-S Chr5 9830995 9831003 0 0 Deletion 8 INTRON Homo FN2666-S Chr5 21097628 21097645 0 0 Deletion 17 INTRON Homo FN2666-S Chr6 23952387 23952392 0 0 Deletion 5 INTERGENIC Homo FN2666-S Chr6 25484165 25484174 0 0 Deletion 9 INTRON Homo FN2666-S Chr7 675913 675921 0 0 Deletion 8 FRAME_SHIFT Hetero OsKitaake07g008100 A0A0E0Q3A1_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=12 FN2666-S Chr7 11800179 11800188 0 0 Deletion 9 INTERGENIC Homo FN2666-S Chr7 27656292 27656294 0 0 Deletion 2 FRAME_SHIFT Hetero OsKitaake07g258200 Q8GRS3_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OJ1477_F01.109 PE=4 SV=Lengt FN2666-S Chr8 5157873 5157874 0 0 Deletion 1 INTERGENIC Hetero FN2666-S Chr8 8908852 8908853 0 0 Deletion 1 INTERGENIC Hetero FN2666-S Chr9 7120350 7120351 0 0 Deletion 1 INTRON Homo FN2666-S Chr10 5064238 5064239 0 0 Deletion 1 INTERGENIC Hetero FN2666-S Chr10 14796263 14796264 0 0 Deletion 1 INTERGENIC Hetero FN2666-S Chr11 18297324 18297326 0 0 Deletion 2 INTERGENIC Hetero FN2666-S Chr11 27070288 27070298 0 0 Deletion 10 INTERGENIC Hetero FN2666-S Chr11 27171130 27171145 0 0 Deletion 15 INTRON Hetero FN2666-S Chr11 28754471 28754472 0 0 Deletion 1 INTERGENIC Hetero FN2666-S Chr12 11416321 11416329 0 0 Deletion 8 INTERGENIC Hetero FN2666-S Chr1 4034381 4034381 0 0 Insertion 2 INTERGENIC Hetero FN2666-S Chr4 3522411 3522411 0 0 Insertion 3 INTERGENIC Hetero FN2666-S Chr4 19327669 19327669 0 0 Insertion 6 INTERGENIC Hetero FN2666-S Chr4 33757825 33757825 0 0 Insertion 2 INTERGENIC Hetero FN2666-S Chr5 22200846 22200846 0 0 Insertion 5 INTERGENIC Hetero FN2666-S Chr8 615099 615099 0 0 Insertion 2 INTERGENIC Hetero FN2666-S Chr8 4958024 4958024 0 0 Insertion 6 INTERGENIC Hetero FN2666-S Chr9 6300776 6300776 0 0 Insertion 2 INTERGENIC Hetero FN2666-S Chr9 12736075 12736075 0 0 Insertion 2 INTERGENIC Homo FN2666-S Chr12 487738 487738 0 0 Insertion 5 INTRON Hetero FN2666-S Chr1 4034381 4034381 0 0 Insertion 2 INTERGENIC Hetero FN2666-S Chr3 18311423 18311423 0 0 Insertion 2 INTRON Hetero FN2666-S Chr4 3522411 3522411 0 0 Insertion 3 INTERGENIC Hetero FN2666-S Chr4 19327669 19327669 0 0 Insertion 6 INTERGENIC Hetero FN2666-S Chr5 18876976 18876976 0 0 Insertion 5 INTERGENIC Hetero FN2666-S Chr6 18168577 18168577 0 0 Insertion 4 INTERGENIC Hetero FN2666-S Chr8 4958024 4958024 0 0 Insertion 6 INTERGENIC Hetero FN2666-S Chr9 6300776 6300776 0 0 Insertion 2 INTERGENIC Hetero FN2666-S Chr9 12736075 12736075 0 0 Insertion 2 INTERGENIC Hetero FN2666-S Chr12 19747177 19747177 0 0 Insertion 2 INTERGENIC Hetero FN2666-S Chr5 15424171 15424173 0 0 Deletion 2 Hetero OsKitaake05g118300 PRO7_ORYSJ Prolamin PPROL 14E OS=Oryza sativa subsp. japonica GN=PROLM7 PE=2 SV=Length=15 FN2666-S Chr1 32550695 33127180 0 0 Inversion 0 Hetero OsKitaake01g330000 BZP06_ORYSJ Basic leucine zipper 6 OS=Oryza sativa subsp. japonica GN=BZIP06 PE=2 SV=Length=26 FN2666-S Chr1 32550698 33127194 0 0 Inversion 0 Hetero OsKitaake01g330000 BZP06_ORYSJ Basic leucine zipper 6 OS=Oryza sativa subsp. japonica GN=BZIP06 PE=2 SV=Length=26 FN2666-S Chr1 32550698 33127194 0 0 Inversion 0 Hetero OsKitaake01g330000 BZP06_ORYSJ Basic leucine zipper 6 OS=Oryza sativa subsp. japonica GN=BZIP06 PE=2 SV=Length=26 FN2666-S Chr1 32550695 33127180 0 0 Inversion 0 Hetero OsKitaake01g338100 A0A0E0N2Y0_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=39 FN2666-S Chr1 32550698 33127194 0 0 Inversion 0 Hetero OsKitaake01g338100 A0A0E0N2Y0_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=39 FN2666-S Chr1 32550698 33127194 0 0 Inversion 0 Hetero OsKitaake01g338100 A0A0E0N2Y0_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=39 FN2666-S Chr3 21339104 21575909 0 0 Inversion 0 Hetero FN2666-S Chr3 21339116 21575912 0 0 Inversion 0 Hetero FN2666-S Chr10 17643431 18203870 0 0 Inversion 0 Hetero FN2666-S Chr3 21339116 21575912 0 0 Inversion 0 Hetero FN2666-S Chr10 17643431 18203870 0 0 Inversion 0 Hetero FN2666-S Chr1 13459001 13472000 0 0 Deletion 12999 OsKitaake01g156600 PP4R3_DANRE Serine/threonine-protein phosphatase 4 regulatory subunit 3 OS=Danio rerio GN=smek1 PE=1 FN2666-S Chr1 1947609 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN2666-S Chr1 18786836 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr1 20493475 A-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN2666-S Chr1 21025087 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr1 23722351 T-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr1 29378707 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN2666-S Chr1 32963618 C-T 0 0 Single Base Substitution 0 INTRON Hetero FN2666-S Chr1 38600098 A-G 0 0 Single Base Substitution 0 INTRON Hetero FN2666-S Chr2 2945902 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr2 20606349 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr2 21115358 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr3 14169772 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr3 22653870 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr3 24343247 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr3 25504347 T-G 0 0 Single Base Substitution 0 INTRON Hetero FN2666-S Chr4 5187284 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr4 5706188 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr4 13876827 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr4 16125121 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr4 22226687 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr4 25712597 G-A 0 0 Single Base Substitution 0 INTRON Homo FN2666-S Chr4 30379861 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake04g233800 XIAO_ORYSJ Probable inactive leucine-rich repeat receptor kinase XIAO OS=Oryza sativa subsp. japonic FN2666-S Chr4 31909554 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr4 33120520 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr4 35001898 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr5 5886237 T-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr5 6518519 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr5 11494910 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr5 12018660 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr6 4070083 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr6 8694676 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr6 9761333 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr6 24319747 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr7 2449133 T-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr7 3187762 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr7 3323464 A-T 0 0 Single Base Substitution 0 INTRON Homo FN2666-S Chr7 10233785 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr7 10233786 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr7 10401838 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr7 11439964 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr7 22016505 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr8 2317906 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr8 11205817 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr8 16245201 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr8 24719749 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr9 600720 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr9 604506 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr9 2255114 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr9 4577601 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr9 9057866 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr9 9353597 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr9 15855613 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake09g113101 DRMH3_ARATH Dormancy-associated protein homolog 3 OS=Arabidopsis thaliana GN=At1g56220 PE=1 SV=Lengt FN2666-S Chr10 5361950 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr10 9371696 C-A 0 0 Single Base Substitution 0 INTRON Hetero FN2666-S Chr10 13687297 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr10 13837611 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr11 4398379 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake11g058800 DPOD1_ORYSJ DNA polymerase delta catalytic subunit OS=Oryza sativa subsp. japonica GN=POLD1 PE=2 SV= FN2666-S Chr11 15413776 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr11 21288575 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr11 25833857 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr11 26988019 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr11 29725923 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr12 4308424 A-G 0 0 Single Base Substitution 0 INTRON Hetero FN2666-S Chr12 4823330 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr12 21357335 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr1 21025087 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr1 23722351 T-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr1 32963618 C-T 0 0 Single Base Substitution 0 INTRON Hetero FN2666-S Chr2 2945902 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr2 20606349 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr2 21115358 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr3 14169772 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr3 25504347 T-G 0 0 Single Base Substitution 0 INTRON Hetero FN2666-S Chr3 34073609 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr4 5706188 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr4 14439903 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr4 16125121 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr4 22226687 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr4 25712597 G-A 0 0 Single Base Substitution 0 INTRON Homo FN2666-S Chr5 5886237 T-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr5 6518519 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr5 11494910 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr5 12018660 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr6 4070083 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr6 24319747 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr7 3187762 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr7 3323464 A-T 0 0 Single Base Substitution 0 INTRON Homo FN2666-S Chr7 10233785 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr7 10233786 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr7 22016505 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr8 2317906 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr8 3226689 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN2666-S Chr8 11205817 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr8 16245201 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr8 18810783 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr9 600720 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr9 604506 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr9 2255114 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr9 9353597 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN2666-S Chr10 5361950 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr10 9371696 C-A 0 0 Single Base Substitution 0 INTRON Hetero FN2666-S Chr10 13837611 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr10 21220121 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr11 21288575 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr11 26988019 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr11 29725923 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr12 4308424 A-G 0 0 Single Base Substitution 0 INTRON Hetero FN2666-S Chr12 4823330 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN2666-S Chr12 21357335 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero