FN3057-S Chr1 1569745 1569747 0 0 Deletion 2 UTR_3_PRIME Homo FN3057-S Chr1 2279800 2279805 0 0 Deletion 5 INTERGENIC Hetero FN3057-S Chr1 22900776 22900788 0 0 Deletion 12 INTERGENIC Hetero FN3057-S Chr1 27082062 27082064 0 0 Deletion 2 INTERGENIC Hetero FN3057-S Chr2 4895210 4895212 0 0 Deletion 2 INTRON Hetero FN3057-S Chr2 18384413 18384424 0 0 Deletion 11 INTERGENIC Homo FN3057-S Chr2 28735730 28735736 0 0 Deletion 6 INTRON Homo FN3057-S Chr4 13192567 13192569 0 0 Deletion 2 INTERGENIC Hetero FN3057-S Chr5 8334613 8334615 0 0 Deletion 2 INTERGENIC Hetero FN3057-S Chr7 10976630 10976635 0 0 Deletion 5 INTERGENIC Homo FN3057-S Chr7 14992187 14992195 0 0 Deletion 8 INTERGENIC Homo FN3057-S Chr5 3661025 3661025 0 0 Insertion 2 INTERGENIC Hetero FN3057-S Chr5 14569030 14569030 0 0 Insertion 2 INTERGENIC Hetero FN3057-S Chr2 27791231 27791232 0 0 Deletion 1 Hetero OsKitaake02g279400 YODA_ARATH Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana GN=YDA PE=1 S FN3057-S Chr8 5822592 Chr3 16982926 0 Translocation 0 Hetero OsKitaake03g211600 COQ9_XENTR Ubiquinone biosynthesis protein COQ9, mitochondrial OS=Xenopus tropicalis GN=coq9 PE=2 SV FN3057-S Chr8 5823128 Chr3 18768807 0 Translocation 0 Hetero OsKitaake03g225900 PPR73_ARATH Pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Arabidopsis thal FN3057-S Chr9 4287638 4398514 0 0 Inversion 0 Hetero OsKitaake09g023300 SFH2_ARATH Phosphatidylinositol/phosphatidylcholine transfer protein SFH2 OS=Arabidopsis thaliana GN FN3057-S Chr9 4287644 4379688 0 0 Inversion 0 Hetero OsKitaake09g023300 SFH2_ARATH Phosphatidylinositol/phosphatidylcholine transfer protein SFH2 OS=Arabidopsis thaliana GN FN3057-S Chr6 20930675 20945094 0 0 Inversion 0 Hetero FN3057-S Chr6 20930683 20945095 0 0 Inversion 0 Hetero FN3057-S Chr9 4338205 5053489 0 0 Inversion 0 Hetero FN3057-S Chr9 5053493 5914552 0 0 Inversion 0 Hetero FN3057-S Chr3 18328001 18446000 0 0 Deletion 117999 OsKitaake03g223300 EXP31_ORYSJ Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=Length=25 FN3057-S Chr3 18328001 18446000 0 0 Deletion 117999 OsKitaake03g223400 Q10J96_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g31490 PE=4 SV=Length=32 FN3057-S Chr3 18328001 18446000 0 0 Deletion 117999 OsKitaake03g223500 CYT8_ORYSJ Cysteine proteinase inhibitor 8 OS=Oryza sativa subsp. japonica GN=Os03g0429000 PE=2 SV=L FN3057-S Chr3 18328001 18446000 0 0 Deletion 117999 OsKitaake03g223600 XDH_ORYSJ Xanthine dehydrogenase OS=Oryza sativa subsp. japonica GN=XDH PE=2 SV=Length=136 FN3057-S Chr3 18328001 18446000 0 0 Deletion 117999 OsKitaake03g223700 B8AKE6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12148 PE=4 SV=Len FN3057-S Chr3 18328001 18446000 0 0 Deletion 117999 OsKitaake03g223800 A0A0E0ITW1_ORYNI Uncharacterized protein OS=Oryza nivara PE=4 SV=Length=27 FN3057-S Chr3 18328001 18446000 0 0 Deletion 117999 OsKitaake03g223900 JMJ25_ARATH Lysine-specific demethylase JMJ25 OS=Arabidopsis thaliana GN=JMJ25 PE=1 SV=Length=102 FN3057-S Chr3 18328001 18446000 0 0 Deletion 117999 OsKitaake03g223800 A0A0E0ITW1_ORYNI Uncharacterized protein OS=Oryza nivara PE=4 SV=Length=27 FN3057-S Chr3 18328001 18446000 0 0 Deletion 117999 OsKitaake03g223900 JMJ25_ARATH Lysine-specific demethylase JMJ25 OS=Arabidopsis thaliana GN=JMJ25 PE=1 SV=Length=102 FN3057-S Chr3 18450001 18767000 0 0 Deletion 316999 OsKitaake03g223900 JMJ25_ARATH Lysine-specific demethylase JMJ25 OS=Arabidopsis thaliana GN=JMJ25 PE=1 SV=Length=102 FN3057-S Chr3 18450001 18767000 0 0 Deletion 316999 OsKitaake03g224000 SBT15_ARATH Subtilisin-like protease SBT1.5 OS=Arabidopsis thaliana GN=SBT1.5 PE=2 SV=Length=77 FN3057-S Chr3 18450001 18767000 0 0 Deletion 316999 OsKitaake03g224050 Q10J76_ORYSJ Transposable element protein, putative, MuDR OS=Oryza sativa subsp. japonica GN=LOC_Os0 FN3057-S Chr3 18450001 18767000 0 0 Deletion 316999 OsKitaake03g224100 UVI15_SCHPO UV-induced protein uvi15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=uvi15 FN3057-S Chr3 18450001 18767000 0 0 Deletion 316999 OsKitaake03g224200 NAGS2_ARATH Probable amino-acid acetyltransferase NAGS2, chloroplastic OS=Arabidopsis thaliana GN=NA FN3057-S Chr3 18450001 18767000 0 0 Deletion 316999 OsKitaake03g224100 UVI15_SCHPO UV-induced protein uvi15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=uvi15 FN3057-S Chr3 18450001 18767000 0 0 Deletion 316999 OsKitaake03g224200 NAGS2_ARATH Probable amino-acid acetyltransferase NAGS2, chloroplastic OS=Arabidopsis thaliana GN=NA FN3057-S Chr3 18450001 18767000 0 0 Deletion 316999 OsKitaake03g224300 A0A0E0ITX1_ORYNI Uncharacterized protein OS=Oryza nivara PE=4 SV=Length=12 FN3057-S Chr3 18450001 18767000 0 0 Deletion 316999 OsKitaake03g224401 Hypothetical protein FN3057-S Chr3 18450001 18767000 0 0 Deletion 316999 OsKitaake03g224500 A0A0D9Z991_9ORYZ Uncharacterized protein OS=Oryza glumipatula PE=4 SV=Length=68 FN3057-S Chr3 18450001 18767000 0 0 Deletion 316999 OsKitaake03g224600 Q75KR0_ORYSJ Os03g0432000 protein OS=Oryza sativa subsp. japonica GN=Os03g0432000 PE=4 SV=Length=24 FN3057-S Chr3 18450001 18767000 0 0 Deletion 316999 OsKitaake03g224700 PPDK2_ORYSJ Pyruvate, phosphate dikinase 2 OS=Oryza sativa subsp. japonica GN=PPDK2 PE=3 SV=Length=8 FN3057-S Chr3 18450001 18767000 0 0 Deletion 316999 OsKitaake03g224800 Hypothetical protein FN3057-S Chr3 18450001 18767000 0 0 Deletion 316999 OsKitaake03g224900 Hypothetical protein FN3057-S Chr3 18450001 18767000 0 0 Deletion 316999 OsKitaake03g225001 Hypothetical protein FN3057-S Chr3 18450001 18767000 0 0 Deletion 316999 OsKitaake03g225100 Hypothetical protein FN3057-S Chr3 18450001 18767000 0 0 Deletion 316999 OsKitaake03g225200 MSL2_ARATH Mechanosensitive ion channel protein 2, chloroplastic OS=Arabidopsis thaliana GN=MSL2 PE= FN3057-S Chr3 18450001 18767000 0 0 Deletion 316999 OsKitaake03g225300 Hypothetical protein FN3057-S Chr3 18450001 18767000 0 0 Deletion 316999 OsKitaake03g225400 SHR2_ORYSJ Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica GN=SHR2 PE=1 SV=Length=60 FN3057-S Chr3 18450001 18767000 0 0 Deletion 316999 OsKitaake03g225500 Q10J51_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g31944 PE=4 SV=Lengt FN3057-S Chr3 18450001 18767000 0 0 Deletion 316999 OsKitaake03g225700 Y283_BACHD Uncharacterized isomerase BH0283 OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 FN3057-S Chr3 18450001 18767000 0 0 Deletion 316999 OsKitaake03g225800 PER2_ORYSI Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=Length=31 FN3057-S Chr3 18450001 18767000 0 0 Deletion 316999 OsKitaake03g225900 PPR73_ARATH Pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Arabidopsis thal FN3057-S Chr6 16863001 16875000 0 0 Deletion 11999 OsKitaake06g158700 A0A0E0A9T8_9ORYZ Uncharacterized protein OS=Oryza glumipatula PE=4 SV=Length=19 FN3057-S Chr6 16863001 16875000 0 0 Deletion 11999 OsKitaake06g158900 Q67VQ6_ORYSJ Immunophilin-like OS=Oryza sativa subsp. japonica GN=Os06g0484500 PE=2 SV=Length=21 FN3057-S Chr7 4002001 4026000 0 0 Deletion 23999 OsKitaake07g050900 BI1L_ARATH BI1-like protein OS=Arabidopsis thaliana GN=At4g15470 PE=2 SV=Length=25 FN3057-S Chr7 4002001 4026000 0 0 Deletion 23999 OsKitaake07g051000 A2YIQ0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25101 PE=4 SV=Len FN3057-S Chr7 4002001 4026000 0 0 Deletion 23999 OsKitaake07g051101 Q6ZEY1_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OJ1361_E02.107 PE=4 SV=Lengt FN3057-S Chr9 4338001 4378000 0 0 Deletion 39999 OsKitaake09g023700 SWT7B_ORYSJ Bidirectional sugar transporter SWEET7b OS=Oryza sativa subsp. japonica GN=SWEET7B PE=3 FN3057-S Chr9 4338001 4378000 0 0 Deletion 39999 OsKitaake09g023900 Q6K1W2_ORYSJ Putative uncharacterized protein B1279D09.18 OS=Oryza sativa subsp. japonica GN=B1279D0 FN3057-S Chr9 4338001 4378000 0 0 Deletion 39999 OsKitaake09g024000 Q6K1W1_ORYSJ Putative uncharacterized protein B1279D09.19 OS=Oryza sativa subsp. japonica GN=B1279D0 FN3057-S Chr9 4338001 4378000 0 0 Deletion 39999 OsKitaake09g024201 SWT7D_ORYSJ Putative bidirectional sugar transporter SWEET7d OS=Oryza sativa subsp. japonica GN=SWEE FN3057-S Chr1 5657460 C-G 0 0 Single Base Substitution 0 INTRON Hetero FN3057-S Chr1 14825672 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3057-S Chr1 20177115 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake01g198650 A0A0N7KD41_ORYSJ Os01g0540400 protein OS=Oryza sativa subsp. japonica GN=Os01g0540400 PE=4 SV=Length FN3057-S Chr1 27945045 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr1 28740718 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr1 30568648 G-C 0 0 Single Base Substitution 0 INTRON Hetero FN3057-S Chr1 39799491 C-G 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN3057-S Chr2 3601654 C-T 0 0 Single Base Substitution 0 INTRON Hetero FN3057-S Chr2 3629388 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr2 31119237 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake02g317900 PUB42_ARATH Putative U-box domain-containing protein 42 OS=Arabidopsis thaliana GN=PUB42 PE=2 SV=Len FN3057-S Chr3 16998081 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN3057-S Chr3 22649496 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr3 31305442 C-T 0 0 Single Base Substitution 0 INTRON Homo FN3057-S Chr5 13790759 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr5 20541119 C-T 0 0 Single Base Substitution 0 INTRON Hetero FN3057-S Chr6 14897559 C-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN3057-S Chr6 28286733 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr7 1500322 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr7 2285413 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr7 2285414 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr7 10645721 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3057-S Chr7 12158364 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3057-S Chr7 20512296 G-T 0 0 Single Base Substitution 0 INTRON Hetero FN3057-S Chr8 331465 G-A 0 0 Single Base Substitution 0 UTR_5_PRIME Hetero FN3057-S Chr8 2033927 G-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr8 5957922 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo OsKitaake08g064600 Y1561_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thal FN3057-S Chr8 6339257 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr8 8583382 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr8 12464931 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr8 14122510 T-C 0 0 Single Base Substitution 0 INTRON Hetero FN3057-S Chr8 25667308 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr8 27795055 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake08g229500 Q6ZD31_ORYSJ Os08g0538600 protein OS=Oryza sativa subsp. japonica GN=P0666G10.103 PE=2 SV=Length=42 FN3057-S Chr9 3907507 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr9 5056838 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr10 613759 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr10 2361583 C-A 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN3057-S Chr10 4554827 T-G 0 0 Single Base Substitution 0 INTRON Hetero FN3057-S Chr10 8049891 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr10 9681171 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr10 10145046 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr11 18922717 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3057-S Chr11 19079634 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3057-S Chr12 714517 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr12 7719552 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr12 7929196 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr12 16830191 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr12 16830827 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr12 17659701 G-A 0 0 Single Base Substitution 0 INTRON Hetero FN3057-S Chr12 24697329 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3057-S Chr12 24697330 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero