FN3301-S Chr2 7198652 7198658 0 0 Deletion 6 INTERGENIC Homo FN3301-S Chr2 15845947 15845949 0 0 Deletion 2 INTERGENIC Homo FN3301-S Chr3 16453731 16453736 0 0 Deletion 5 UTR_5_PRIME Hetero FN3301-S Chr3 20514717 20514724 0 0 Deletion 7 INTERGENIC Homo FN3301-S Chr3 26063430 26063432 0 0 Deletion 2 INTRON Hetero FN3301-S Chr5 3245935 3245937 0 0 Deletion 2 INTRON Hetero FN3301-S Chr7 3485718 3485720 0 0 Deletion 2 INTERGENIC Homo FN3301-S Chr10 6105403 6105408 0 0 Deletion 5 INTERGENIC Homo FN3301-S Chr10 9401184 9401197 0 0 Deletion 13 INTERGENIC Hetero FN3301-S Chr11 6240739 6240740 0 0 Deletion 1 INTRON Hetero FN3301-S Chr4 26156687 26156687 0 0 Insertion 2 INTRON Hetero FN3301-S Chr7 1197633 1197633 0 0 Insertion 1 INTERGENIC Homo FN3301-S Chr8 8176974 8176975 0 0 Deletion 1 Hetero 0 FN3301-S Chr10 6711178 Chr8 232176 0 Translocation 0 Hetero OsKitaake08g003200 RMR2_ORYSJ Receptor homology region, transmembrane domain- and RING domain-containing protein 2 OS=O FN3301-S Chr10 6711184 Chr8 230725 0 Translocation 0 Hetero FN3301-S Chr7 12795465 12801143 0 0 Inversion 0 Hetero OsKitaake07g113500 CDI_ARATH Protein CDI OS=Arabidopsis thaliana GN=CDI PE=2 SV=Length=25 FN3301-S Chr7 12795478 12801152 0 0 Inversion 0 Hetero OsKitaake07g113500 CDI_ARATH Protein CDI OS=Arabidopsis thaliana GN=CDI PE=2 SV=Length=25 FN3301-S Chr7 27553031 28184845 0 0 Inversion 0 Hetero FN3301-S Chr7 27553040 28184845 0 0 Inversion 0 Hetero FN3301-S Chr8 19261792 20212007 0 0 Inversion 0 Hetero FN3301-S Chr8 19261793 20212007 0 0 Inversion 0 Hetero FN3301-S Chr6 14569001 14853000 0 0 Deletion 283999 OsKitaake06g148700 Hypothetical protein FN3301-S Chr6 14569001 14853000 0 0 Deletion 283999 OsKitaake06g148800 EXL2_ARATH GDSL esterase/lipase EXL2 OS=Arabidopsis thaliana GN=EXL2 PE=2 SV=Length=37 FN3301-S Chr6 14569001 14853000 0 0 Deletion 283999 OsKitaake06g148900 AB37G_ORYSJ ABC transporter G family member 37 OS=Oryza sativa subsp. japonica GN=ABCG37 PE=2 SV=Len FN3301-S Chr6 14569001 14853000 0 0 Deletion 283999 OsKitaake06g149000 A2YCQ7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22894 PE=4 SV=Len FN3301-S Chr6 14569001 14853000 0 0 Deletion 283999 OsKitaake06g149050 B8B1Q5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22895 PE=4 SV=Len FN3301-S Chr6 14569001 14853000 0 0 Deletion 283999 OsKitaake06g149100 Q69SN0_ORYSJ Putative uncharacterized protein OSJNBa0022O02.20 OS=Oryza sativa subsp. japonica GN=OS FN3301-S Chr6 14569001 14853000 0 0 Deletion 283999 OsKitaake06g149200 Q69SM9_ORYSJ Os06g0352900 protein OS=Oryza sativa subsp. japonica GN=Os06g0352900 PE=4 SV=Length=84 FN3301-S Chr6 14569001 14853000 0 0 Deletion 283999 OsKitaake06g149300 Y3514_ARATH Uncharacterized exonuclease domain-containing protein At3g15140 OS=Arabidopsis thaliana FN3301-S Chr6 14569001 14853000 0 0 Deletion 283999 OsKitaake06g149500 ACOX3_ARATH Acyl-coenzyme A oxidase 3, peroxisomal OS=Arabidopsis thaliana GN=ACX3 PE=1 SV=Length=67 FN3301-S Chr6 14569001 14853000 0 0 Deletion 283999 OsKitaake06g149600 PPH_ARATH Pheophytinase, chloroplastic OS=Arabidopsis thaliana GN=PPH PE=1 SV=Length=48 FN3301-S Chr6 14569001 14853000 0 0 Deletion 283999 OsKitaake06g149700 Q69XR1_ORYSJ Putative uncharacterized protein P0526E12.30 OS=Oryza sativa subsp. japonica GN=P0526E1 FN3301-S Chr6 14569001 14853000 0 0 Deletion 283999 OsKitaake06g149800 SAC1_ARATH Phosphoinositide phosphatase SAC1 OS=Arabidopsis thaliana GN=SAC1 PE=1 SV=Length=91 FN3301-S Chr6 14569001 14853000 0 0 Deletion 283999 OsKitaake06g149850 Hypothetical protein FN3301-S Chr6 14569001 14853000 0 0 Deletion 283999 OsKitaake06g149900 IAA22_ORYSJ Auxin-responsive protein IAA22 OS=Oryza sativa subsp. japonica GN=IAA22 PE=2 SV=Length=2 FN3301-S Chr6 14861001 14924000 0 0 Deletion 62999 OsKitaake06g150000 BRD4_HUMAN Bromodomain-containing protein 4 OS=Homo sapiens GN=BRD4 PE=1 SV=Length=136 FN3301-S Chr6 14861001 14924000 0 0 Deletion 62999 OsKitaake06g150101 B9FT66_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_21293 PE=4 SV=Length=57 FN3301-S Chr6 14861001 14924000 0 0 Deletion 62999 OsKitaake06g150200 A0A0P0WWL8_ORYSJ Os06g0355701 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os06g0355701 PE= FN3301-S Chr6 14861001 14924000 0 0 Deletion 62999 OsKitaake06g152200 NOP5B_ARATH Probable nucleolar protein 5-2 OS=Arabidopsis thaliana GN=NOP5-2 PE=1 SV=Length=53 FN3301-S Chr6 14861001 14924000 0 0 Deletion 62999 OsKitaake06g150500 XIP1_WHEAT Xylanase inhibitor protein 1 OS=Triticum aestivum GN=XIPI PE=1 SV=Length=30 FN3301-S Chr6 15451001 15734000 0 0 Deletion 282999 OsKitaake06g152400 Q69TD4_ORYSJ Putative uncharacterized protein P0543C04.27 OS=Oryza sativa subsp. japonica GN=P0543C0 FN3301-S Chr6 15451001 15734000 0 0 Deletion 282999 OsKitaake06g152600 A0A0E0A9H8_9ORYZ Uncharacterized protein OS=Oryza glumipatula PE=4 SV=Length=32 FN3301-S Chr6 15451001 15734000 0 0 Deletion 282999 OsKitaake06g152700 Hypothetical protein FN3301-S Chr6 15451001 15734000 0 0 Deletion 282999 OsKitaake06g152800 GLGB3_ARATH 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic OS=Arabidopsis thaliana FN3301-S Chr6 15451001 15734000 0 0 Deletion 282999 OsKitaake06g152900 A0A0E0E1V1_9ORYZ Uncharacterized protein OS=Oryza meridionalis PE=4 SV=Length=22 FN3301-S Chr6 15451001 15734000 0 0 Deletion 282999 OsKitaake06g153000 MPK11_ORYSJ Mitogen-activated protein kinase 11 OS=Oryza sativa subsp. japonica GN=MPK11 PE=2 SV=Len FN3301-S Chr6 15451001 15734000 0 0 Deletion 282999 OsKitaake06g153050 A0A0D3GGJ8_9ORYZ Uncharacterized protein OS=Oryza barthii PE=4 SV=Length=13 FN3301-S Chr6 15451001 15734000 0 0 Deletion 282999 OsKitaake06g153000 MPK11_ORYSJ Mitogen-activated protein kinase 11 OS=Oryza sativa subsp. japonica GN=MPK11 PE=2 SV=Len FN3301-S Chr6 15451001 15734000 0 0 Deletion 282999 OsKitaake06g153050 A0A0D3GGJ8_9ORYZ Uncharacterized protein OS=Oryza barthii PE=4 SV=Length=13 FN3301-S Chr6 17275001 17314000 0 0 Deletion 38999 OsKitaake06g161200 I1Q6J4_ORYGL Uncharacterized protein OS=Oryza glaberrima PE=4 SV=Length=23 FN3301-S Chr6 17275001 17314000 0 0 Deletion 38999 OsKitaake06g161103 P2C68_ORYSJ Probable protein phosphatase 2C 68 OS=Oryza sativa subsp. japonica GN=Os09g0325700 PE=2 FN3301-S Chr6 17275001 17314000 0 0 Deletion 38999 OsKitaake06g161200 I1Q6J4_ORYGL Uncharacterized protein OS=Oryza glaberrima PE=4 SV=Length=23 FN3301-S Chr6 17275001 17314000 0 0 Deletion 38999 OsKitaake06g161103 P2C68_ORYSJ Probable protein phosphatase 2C 68 OS=Oryza sativa subsp. japonica GN=Os09g0325700 PE=2 FN3301-S Chr6 17275001 17314000 0 0 Deletion 38999 OsKitaake06g161203 FRS7_ARATH Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=Length=76 FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g016500 MCU5_ARATH Calcium uniporter protein 5, mitochondrial OS=Arabidopsis thaliana GN=At1g57610 PE=2 SV=L FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g016600 GAUT7_ARATH Probable galacturonosyltransferase 7 OS=Arabidopsis thaliana GN=GAUT7 PE=1 SV=Length=61 FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g016633 Q6H4V7_ORYSJ Putative uncharacterized protein OSJNBa0085K21.35 OS=Oryza sativa subsp. japonica GN=OS FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g016666 Hypothetical protein FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g016700 PP332_ARATH Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana GN=EMB1417 FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g016800 GST23_MAIZE Glutathione transferase GST 23 OS=Zea mays PE=2 SV=Length=22 FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g016900 C3H22_ORYSJ Zinc finger CCCH domain-containing protein 22 OS=Oryza sativa subsp. japonica GN=Os03g03 FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g017000 APY3_ORYSJ Probable apyrase 3 OS=Oryza sativa subsp. japonica GN=APY3 PE=2 SV=Length=45 FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g017200 NAC10_ORYSJ NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=Leng FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g017300 NAC77_ORYSJ NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=Length FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g017400 B8BLS9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_37308 PE=4 SV=Len FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g017500 ABA2_SOLLC Zeaxanthin epoxidase, chloroplastic OS=Solanum lycopersicum PE=2 SV=Length=66 FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g017550 TAO1_ARATH Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=4 SV=Length=118 FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g017500 ABA2_SOLLC Zeaxanthin epoxidase, chloroplastic OS=Solanum lycopersicum PE=2 SV=Length=66 FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g017550 TAO1_ARATH Disease resistance protein TAO1 OS=Arabidopsis thaliana GN=TAO1 PE=4 SV=Length=118 FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g017600 RGA2_SOLBU Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=Length=97 FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g017700 RGA2_SOLBU Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=Length=97 FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g017800 RS16_ORYSJ 40S ribosomal protein S16 OS=Oryza sativa subsp. japonica GN=RPS16A PE=2 SV=Length=14 FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g017900 A0A0A9DUU2_ARUDO Uncharacterized protein OS=Arundo donax PE=4 SV=Length=6 FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g018000 ARAD1_ARATH Probable arabinosyltransferase ARAD1 OS=Arabidopsis thaliana GN=ARAD1 PE=1 SV=Length=44 FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g018100 MIF2_ORYSJ Mini zinc finger protein 2 OS=Oryza sativa subsp. japonica GN=MIF2 PE=3 SV=Length=10 FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g018200 A0A0P0Y6N0_ORYSJ Os12g0124600 protein OS=Oryza sativa subsp. japonica GN=Os12g0124600 PE=4 SV=Length FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g018300 CDC45_SCHPO Cell division control protein 45 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC FN3301-S Chr12 1113001 1265000 0 0 Deletion 151999 OsKitaake12g018400 MYB06_ANTMA Myb-related protein 306 OS=Antirrhinum majus GN=MYB306 PE=2 SV=Length=31 FN3301-S Chr1 13719364 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN3301-S Chr1 30693046 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3301-S Chr2 7191771 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN3301-S Chr2 28620594 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3301-S Chr3 17704004 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3301-S Chr3 25858354 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3301-S Chr4 6359376 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3301-S Chr4 8004736 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3301-S Chr4 17019474 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3301-S Chr4 17245044 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3301-S Chr5 5221158 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3301-S Chr5 26061396 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3301-S Chr6 15022431 A-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN3301-S Chr6 27243305 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3301-S Chr6 27957307 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3301-S Chr7 10904030 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3301-S Chr7 23466312 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3301-S Chr7 26605965 C-T 0 0 Single Base Substitution 0 SPLICE_SITE_DONOR Hetero OsKitaake07g246900 Q0J4B7_ORYSJ Os08g0522100 protein OS=Oryza sativa subsp. japonica GN=Os08g0522100 PE=4 SV=Length=157 FN3301-S Chr8 17541907 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3301-S Chr8 24225755 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3301-S Chr8 29301323 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3301-S Chr10 1833724 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3301-S Chr10 9556290 C-T 0 0 Single Base Substitution 0 INTRON Homo FN3301-S Chr10 9818261 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3301-S Chr10 9818262 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3301-S Chr11 2026246 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3301-S Chr11 13087777 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3301-S Chr11 16574197 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3301-S Chr11 21399216 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3301-S Chr11 22891973 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake11g181200 RPP13_ARATH Disease resistance protein RPP13 OS=Arabidopsis thaliana GN=RPP13 PE=2 SV=Length=83 FN3301-S Chr12 4012483 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3301-S Chr12 14300140 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero