FN3431-S Chr2 3007831 3007832 0 0 Deletion 1 FRAME_SHIFT Homo OsKitaake02g042900 PSYR1_ARATH Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSY1R PE=1 SV=Lengt FN3431-S Chr7 24430863 24430864 0 0 Deletion 1 INTRON Homo FN3431-S Chr5 5949950 5949950 0 0 Insertion 2 INTERGENIC Hetero FN3431-S Chr12 23606341 23606341 0 0 Insertion 2 INTERGENIC Hetero FN3431-S Chr8 13490546 13490548 0 0 Deletion 2 Hetero 0 FN3431-S Chr5 30215229 30215229 0 0 Insertion 1 Hetero 0 FN3431-S Chr9 18110476 Chr3 15403834 0 Translocation 0 Hetero FN3431-S Chr9 18151721 18483875 0 0 Inversion 0 Hetero OsKitaake09g139900 AIR3_ARATH Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana GN=AIR3 PE=2 SV=Length=77 FN3431-S Chr2 19292088 20290398 0 0 Inversion 0 Hetero OsKitaake02g197800 SMXL3_ARATH Protein SMAX1-LIKE 3 OS=Arabidopsis thaliana GN=SMXL3 PE=2 SV=Length=81 FN3431-S Chr9 18151721 18483875 0 0 Inversion 0 Hetero OsKitaake09g144700 Q0J0R9_ORYSJ Os09g0485800 protein OS=Oryza sativa subsp. japonica GN=Os09g0485800 PE=2 SV=Length=17 FN3431-S Chr10 9046310 9428187 0 0 Inversion 0 Hetero OsKitaake10g054600 BGL34_ORYSJ Beta-glucosidase 34 OS=Oryza sativa subsp. japonica GN=BGLU34 PE=2 SV=Length=51 FN3431-S Chr10 9046382 9428204 0 0 Inversion 0 Hetero OsKitaake10g054600 BGL34_ORYSJ Beta-glucosidase 34 OS=Oryza sativa subsp. japonica GN=BGLU34 PE=2 SV=Length=51 FN3431-S Chr12 1899191 2345269 0 0 Inversion 0 Homo FN3431-S Chr12 1899201 2345274 0 0 Inversion 0 Homo FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g189000 A0A0E0NFL6_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=13 FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g189100 GT21_ORYSJ Probable glucuronosyltransferase Os02g0520750 OS=Oryza sativa subsp. japonica GN=Os02g052 FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g189200 UCRI_MAIZE Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Zea mays PE=2 SV=Length=27 FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g189300 EF114_ARATH Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=1 S FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g189400 BON1_ARATH Protein BONZAI 1 OS=Arabidopsis thaliana GN=BON1 PE=1 SV=Length=57 FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g189500 OTUBL_ARATH Ubiquitin thioesterase otubain-like OS=Arabidopsis thaliana GN=At1g28120 PE=2 SV=Length= FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g189600 OTUBL_ARATH Ubiquitin thioesterase otubain-like OS=Arabidopsis thaliana GN=At1g28120 PE=2 SV=Length= FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g189700 ACO13_PONAB Acyl-coenzyme A thioesterase 13 OS=Pongo abelii GN=ACOT13 PE=2 SV=Length=14 FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g189900 OTUBL_ARATH Ubiquitin thioesterase otubain-like OS=Arabidopsis thaliana GN=At1g28120 PE=2 SV=Length= FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g190000 OTUBL_CAEBR Ubiquitin thioesterase otubain-like OS=Caenorhabditis briggsae GN=otub-1 PE=3 SV=Length= FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g190050 Hypothetical protein FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g190100 A0A0P0VJN7_ORYSJ Os02g0522800 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os02g0522800 PE= FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g190200 PUX16_ARATH Plant UBX domain-containing protein 16 OS=Arabidopsis thaliana GN=PUX16 PE=2 SV=Length=4 FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g190300 A0A0P0VJS0_ORYSJ Os02g0523100 protein OS=Oryza sativa subsp. japonica GN=Os02g0523100 PE=4 SV=Length FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g190500 GCP5_MOUSE Gamma-tubulin complex component 5 OS=Mus musculus GN=Tubgcp5 PE=2 SV=Length=102 FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g190600 TSN1_ARATH Ribonuclease TUDOR 1 OS=Arabidopsis thaliana GN=TSN1 PE=1 SV=Length=99 FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g190650 Hypothetical protein FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g190700 IPK2_ORYSJ Inositol polyphosphate multikinase IPK2 OS=Oryza sativa subsp. japonica GN=IPK2 PE=2 SV=L FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g190800 B9F0B3_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_06958 PE=4 SV=Length=14 FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g190850 RK19_SPIOL 50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea GN=RPL19 PE=1 SV=Length=23 FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g190900 BRG2_ARATH Probable BOI-related E3 ubiquitin-protein ligase 2 OS=Arabidopsis thaliana GN=BRG2 PE=1 S FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g191000 LWD1_ARATH WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1 PE=2 SV=Length=34 FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g191100 A0A0D3F5T9_9ORYZ Uncharacterized protein OS=Oryza barthii PE=4 SV=Length=10 FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g191200 MOC32_MAIZE Adenylyltransferase and sulfurtransferase MOCS3-2 OS=Zea mays GN=MOCS3-2 PE=2 SV=Length= FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g191300 A0A0E0NFQ4_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=11 FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g191500 ACS_ARATH Acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal OS=Arabidopsis thaliana GN=ACS PE= FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g191600 HGNAT_MOUSE Heparan-alpha-glucosaminide N-acetyltransferase OS=Mus musculus GN=Hgsnat PE=1 SV=Length FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g191700 CLPD1_ORYSJ Chaperone protein ClpD1, chloroplastic OS=Oryza sativa subsp. japonica GN=CLPD1 PE=2 SV= FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g191801 B7EDW5_ORYSJ Os02g0526500 protein OS=Oryza sativa subsp. japonica GN=Os02g0526500 PE=2 SV=Length=13 FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g191900 RPD1_ARATH Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=Length=40 FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g192000 I1P0W0_ORYGL Uncharacterized protein OS=Oryza glaberrima PE=4 SV=Length=45 FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g192100 SM3L2_ARATH DNA repair protein RAD5A OS=Arabidopsis thaliana GN=RAD5A PE=1 SV=Length=102 FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g192200 Y4276_ARATH Uncharacterized protein At4g22758 OS=Arabidopsis thaliana GN=At4g22758 PE=2 SV=Length=25 FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g192300 HSFA3_ORYSJ Heat stress transcription factor A-3 OS=Oryza sativa subsp. japonica GN=HSFA3 PE=2 SV=Le FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g192350 A0A0E0G7L6_ORYNI Uncharacterized protein OS=Oryza nivara PE=4 SV=Length=23 FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g192400 CTR1_ARATH Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=Length=82 FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g192600 Hypothetical protein FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g192700 Y5370_ARATH PAN domain-containing protein At5g03700 OS=Arabidopsis thaliana GN=At5g03700 PE=1 SV=Len FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g192800 ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2 SV=Length=32 FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g192900 B7EU28_ORYSJ Os02g0528100 protein OS=Oryza sativa subsp. japonica GN=Os02g0528100 PE=2 SV=Length=16 FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g193000 GLGB_MAIZE 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic OS=Zea mays GN=SBE1 PE=1 FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g193100 Hypothetical protein FN3431-S Chr2 19289001 19771000 0 0 Deletion 481999 OsKitaake02g193150 A3A7J7_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_06983 PE=4 SV=Length=26 FN3431-S Chr2 20139001 20235000 0 0 Deletion 95999 OsKitaake02g196400 ELM1_ARATH Mitochondrial fission protein ELM1 OS=Arabidopsis thaliana GN=ELM1 PE=1 SV=Length=42 FN3431-S Chr2 20139001 20235000 0 0 Deletion 95999 OsKitaake02g196500 FB346_ARATH F-box protein At3g44326 OS=Arabidopsis thaliana GN=At3g44326 PE=2 SV=Length=36 FN3431-S Chr2 20139001 20235000 0 0 Deletion 95999 OsKitaake02g196600 Hypothetical protein FN3431-S Chr2 20139001 20235000 0 0 Deletion 95999 OsKitaake02g196700 A0A0D3F616_9ORYZ Uncharacterized protein OS=Oryza barthii PE=4 SV=Length=10 FN3431-S Chr2 20139001 20235000 0 0 Deletion 95999 OsKitaake02g196800 FDL1_ARATH F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana GN=At1g13570 PE=2 SV=Lengt FN3431-S Chr2 20139001 20235000 0 0 Deletion 95999 OsKitaake02g196900 RSP1_CAEEL Probable splicing factor, arginine/serine-rich 1 OS=Caenorhabditis elegans GN=rsp-1 PE=3 FN3431-S Chr2 20139001 20235000 0 0 Deletion 95999 OsKitaake02g197000 Q6EU57_ORYSJ Os02g0536500 protein OS=Oryza sativa subsp. japonica GN=Os02g0536500 PE=2 SV=Length=12 FN3431-S Chr2 20139001 20235000 0 0 Deletion 95999 OsKitaake02g197066 Q6EU56_ORYSJ Putative uncharacterized protein OJ1112_G07.33 OS=Oryza sativa subsp. japonica GN=OJ111 FN3431-S Chr2 20139001 20235000 0 0 Deletion 95999 OsKitaake02g197132 A0A0E0NG05_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=12 FN3431-S Chr2 20139001 20235000 0 0 Deletion 95999 OsKitaake02g197200 PMEI8_ORYSJ Pectinesterase inhibitor 8 OS=Oryza sativa subsp. japonica GN=PMEI8 PE=2 SV=Length=18 FN3431-S Chr2 20139001 20235000 0 0 Deletion 95999 OsKitaake02g197300 PMEI8_ORYSJ Pectinesterase inhibitor 8 OS=Oryza sativa subsp. japonica GN=PMEI8 PE=2 SV=Length=18 FN3431-S Chr2 21427001 21445000 0 0 Deletion 17999 OsKitaake02g206900 M3K3A_ARATH Mitogen-activated protein kinase kinase kinase 3 OS=Arabidopsis thaliana GN=MAPKKK3 PE=1 FN3431-S Chr2 21427001 21445000 0 0 Deletion 17999 OsKitaake02g207000 GUX1_ARATH UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 OS=Arabidopsis thaliana GN=GUX1 PE= FN3431-S Chr9 18107001 18151000 0 0 Deletion 43999 OsKitaake09g139200 RGI3_ARATH LRR receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=RGI3 PE=1 SV FN3431-S Chr9 18107001 18151000 0 0 Deletion 43999 OsKitaake09g139300 HIP41_ARATH Heavy metal-associated isoprenylated plant protein 41 OS=Arabidopsis thaliana GN=HIPP41 FN3431-S Chr9 18107001 18151000 0 0 Deletion 43999 OsKitaake09g139400 HIP41_ARATH Heavy metal-associated isoprenylated plant protein 41 OS=Arabidopsis thaliana GN=HIPP41 FN3431-S Chr9 18107001 18151000 0 0 Deletion 43999 OsKitaake09g139500 RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=Length=92 FN3431-S Chr9 18107001 18151000 0 0 Deletion 43999 OsKitaake09g139600 RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=Length=92 FN3431-S Chr9 18107001 18151000 0 0 Deletion 43999 OsKitaake09g139800 PFKA2_ARATH ATP-dependent 6-phosphofructokinase 2 OS=Arabidopsis thaliana GN=PFK2 PE=1 SV=Length=44 FN3431-S Chr9 18107001 18151000 0 0 Deletion 43999 OsKitaake09g139900 AIR3_ARATH Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana GN=AIR3 PE=2 SV=Length=77 FN3431-S Chr1 15709412 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake01g171001 C7J8F7_ORYSJ Os11g0474566 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os11g0474566 PE=4 SV FN3431-S Chr1 15928512 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3431-S Chr2 5836814 C-T 0 0 Single Base Substitution 0 INTRON Homo FN3431-S Chr2 14844904 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3431-S Chr2 23785766 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3431-S Chr3 4599703 A-T 0 0 Single Base Substitution 0 INTRON Hetero FN3431-S Chr3 21204953 A-T 0 0 Single Base Substitution 0 INTRON Homo FN3431-S Chr3 22748499 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3431-S Chr4 6115822 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3431-S Chr4 14716936 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3431-S Chr4 19234110 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3431-S Chr5 29016089 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3431-S Chr6 8401242 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3431-S Chr6 18776249 C-T 0 0 Single Base Substitution 0 INTRON Hetero FN3431-S Chr7 745433 C-T 0 0 Single Base Substitution 0 INTRON Hetero FN3431-S Chr7 2215249 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake07g030900 CDI8_ARATH Cadmium-induced protein AS8 OS=Arabidopsis thaliana GN=At4g19070 PE=2 SV=Length=17 FN3431-S Chr7 10477815 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3431-S Chr7 12080860 G-A 0 0 Single Base Substitution 0 INTRON Hetero FN3431-S Chr7 12388476 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3431-S Chr8 2067265 C-T 0 0 Single Base Substitution 0 INTRON Hetero FN3431-S Chr8 7401448 G-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN3431-S Chr8 21734968 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake08g164300 APY6_ARATH Probable apyrase 6 OS=Arabidopsis thaliana GN=APY6 PE=2 SV=Length=55 FN3431-S Chr9 1679248 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3431-S Chr9 17994858 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake09g137700 FLA1_ARATH Fasciclin-like arabinogalactan protein 1 OS=Arabidopsis thaliana GN=FLA1 PE=1 SV=Length=4 FN3431-S Chr10 407501 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3431-S Chr10 3248946 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3431-S Chr10 4719269 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3431-S Chr10 14890611 G-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3431-S Chr10 23098276 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3431-S Chr10 23802395 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3431-S Chr11 16240564 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN3431-S Chr11 18292716 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3431-S Chr11 21315892 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3431-S Chr12 9407514 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3431-S Chr12 25269573 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero