FN3477-S Chr1 25469104 25469106 0 0 Deletion 2 INTERGENIC Hetero FN3477-S Chr2 4942962 4942963 0 0 Deletion 1 FRAME_SHIFT Homo OsKitaake02g068700 MYB44_ARATH Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=Length=30 FN3477-S Chr2 8799464 8799468 0 0 Deletion 4 UTR_5_PRIME Hetero FN3477-S Chr2 36127463 36127471 0 0 Deletion 8 UTR_3_PRIME Homo FN3477-S Chr3 2785744 2785748 0 0 Deletion 4 UTR_3_PRIME Homo FN3477-S Chr3 6178367 6178376 0 0 Deletion 9 INTRON Homo FN3477-S Chr3 18964336 18964358 0 0 Deletion 22 INTERGENIC Hetero FN3477-S Chr3 20868992 20868993 0 0 Deletion 1 INTERGENIC Hetero FN3477-S Chr3 32897340 32897341 0 0 Deletion 1 FRAME_SHIFT Hetero OsKitaake03g349600 M3K5G_ARATH Mitogen-activated protein kinase kinase kinase 5 OS=Arabidopsis thaliana GN=MAPKKK5 PE=1 FN3477-S Chr4 23626064 23626070 0 0 Deletion 6 CODON_DELETION Homo OsKitaake04g148900 A0A0E0H1J2_ORYNI Uncharacterized protein OS=Oryza nivara PE=4 SV=Length=39 FN3477-S Chr5 20369211 20369212 0 0 Deletion 1 INTRON Hetero FN3477-S Chr6 26421945 26421948 0 0 Deletion 3 INTRON Hetero FN3477-S Chr7 25666665 25666670 0 0 Deletion 5 INTERGENIC Homo FN3477-S Chr8 8478250 8478252 0 0 Deletion 2 INTERGENIC Hetero FN3477-S Chr8 14088407 14088408 0 0 Deletion 1 INTERGENIC Homo FN3477-S Chr8 20132673 20132682 0 0 Deletion 9 INTERGENIC Hetero FN3477-S Chr11 25972682 25972685 0 0 Deletion 3 INTERGENIC Homo FN3477-S Chr11 26612177 26612184 0 0 Deletion 7 INTERGENIC Homo FN3477-S Chr12 16638099 16638102 0 0 Deletion 3 INTERGENIC Hetero FN3477-S Chr3 15996493 15996493 0 0 Insertion 3 INTRON Hetero FN3477-S Chr8 13924848 13924849 0 0 Deletion 1 Hetero 0 FN3477-S Chr12 18708310 Chr3 16725853 0 Translocation 0 Hetero OsKitaake12g138300 UPS2_ARATH Ureide permease 2 OS=Arabidopsis thaliana GN=UPS2 PE=1 SV=Length=39 FN3477-S Chr9 10346456 Chr8 13857589 0 Translocation 0 Hetero FN3477-S Chr9 10346620 Chr8 13857888 0 Translocation 0 Hetero FN3477-S Chr2 9921556 10347228 0 0 Inversion 0 Hetero OsKitaake02g123400 C71Z7_ORYSJ Ent-cassadiene C2-hydroxylase OS=Oryza sativa subsp. japonica GN=CYP71Z7 PE=1 SV=Length= FN3477-S Chr2 9921584 10347229 0 0 Inversion 0 Hetero OsKitaake02g123400 C71Z7_ORYSJ Ent-cassadiene C2-hydroxylase OS=Oryza sativa subsp. japonica GN=CYP71Z7 PE=1 SV=Length= FN3477-S Chr12 18683001 18706000 0 0 Deletion 22999 OsKitaake12g137900 CCA21_ORYSJ Cyclin-A2-1 OS=Oryza sativa subsp. japonica GN=CYCA2-1 PE=2 SV=Length=49 FN3477-S Chr12 18683001 18706000 0 0 Deletion 22999 OsKitaake12g138000 SERC_ARATH Phosphoserine phosphatase, chloroplastic OS=Arabidopsis thaliana GN=PSP PE=1 SV=Length=29 FN3477-S Chr12 18683001 18706000 0 0 Deletion 22999 OsKitaake12g138100 NILP2_ARATH Nitrilase-like protein 2 OS=Arabidopsis thaliana GN=NLP2 PE=2 SV=Length=30 FN3477-S Chr12 18683001 18706000 0 0 Deletion 22999 OsKitaake12g138200 JJJ1_ARATH DNAJ protein JJJ1 homolog OS=Arabidopsis thaliana GN=JJJ1 PE=1 SV=Length=63 FN3477-S Chr1 3373130 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3477-S Chr1 6647400 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake01g083900 GUN1_ORYSJ Endoglucanase 1 OS=Oryza sativa subsp. japonica GN=GLU7 PE=2 SV=Length=64 FN3477-S Chr1 12695932 G-A 0 0 Single Base Substitution 0 INTRON Homo FN3477-S Chr1 13907061 G-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3477-S Chr1 31762069 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3477-S Chr1 40532630 G-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3477-S Chr2 10249605 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3477-S Chr3 18927558 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3477-S Chr4 2198223 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3477-S Chr4 20627128 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3477-S Chr4 34213884 T-A 0 0 Single Base Substitution 0 INTRON Hetero FN3477-S Chr5 6281992 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3477-S Chr5 15398121 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3477-S Chr5 22791020 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3477-S Chr5 27184226 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN3477-S Chr6 7962025 G-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3477-S Chr6 21538307 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3477-S Chr7 6747098 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3477-S Chr7 11952414 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3477-S Chr7 19082272 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3477-S Chr7 25132838 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3477-S Chr8 7543840 C-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN3477-S Chr8 22250288 A-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3477-S Chr8 23576888 C-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN3477-S Chr9 3660298 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN3477-S Chr10 671778 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3477-S Chr11 8758200 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3477-S Chr11 13622085 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3477-S Chr12 3641437 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo OsKitaake12g050700 GCA2_ARATH Gamma carbonic anhydrase 2, mitochondrial OS=Arabidopsis thaliana GN=GAMMACA2 PE=1 SV=Len FN3477-S Chr12 8396267 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3477-S Chr12 13256044 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3477-S Chr12 16815338 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3477-S Chr12 18566486 A-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3477-S Chr12 18716576 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero