FN3478-S Chr4 14043753 14043755 0 0 Deletion 2 INTERGENIC Hetero FN3478-S Chr4 31668714 31668730 0 0 Deletion 16 INTRON Homo FN3478-S Chr4 35610362 35610364 0 0 Deletion 2 INTRON Hetero FN3478-S Chr5 11495593 11495594 0 0 Deletion 1 INTERGENIC Homo FN3478-S Chr7 5473476 5473477 0 0 Deletion 1 INTRON Hetero FN3478-S Chr9 2468228 2468233 0 0 Deletion 5 INTERGENIC Hetero FN3478-S Chr9 8537100 8537114 0 0 Deletion 14 INTERGENIC Homo FN3478-S Chr9 10497529 10497560 0 0 Deletion 31 INTERGENIC Hetero FN3478-S Chr9 12595485 12595487 0 0 Deletion 2 FRAME_SHIFT Homo OsKitaake09g083100 RSLE2_ORYSJ Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica FN3478-S Chr9 14509920 14509922 0 0 Deletion 2 INTERGENIC Hetero FN3478-S Chr10 9534591 9534594 0 0 Deletion 3 INTERGENIC Hetero FN3478-S Chr11 21478001 21478002 0 0 Deletion 1 INTERGENIC Hetero FN3478-S Chr12 15646253 15646264 0 0 Deletion 11 INTRON Hetero FN3478-S Chr9 17360122 17360122 0 0 Insertion 3 INTERGENIC Hetero FN3478-S Chr7 10294300 Chr4 20517110 0 Translocation 0 Hetero OsKitaake04g110800 PCNB_HAEIN Poly(A) polymerase I OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd FN3478-S Chr12 14314210 Chr5 26454137 0 Translocation 0 Hetero OsKitaake05g234500 U88F3_PYRCO UDP-glycosyltransferase 88F3 OS=Pyrus communis GN=UGT88F3 PE=2 SV=Length=48 FN3478-S Chr12 14314259 Chr5 26453283 0 Translocation 0 Hetero OsKitaake05g234500 U88F3_PYRCO UDP-glycosyltransferase 88F3 OS=Pyrus communis GN=UGT88F3 PE=2 SV=Length=48 FN3478-S Chr5 11502238 Chr2 31607720 0 Translocation 0 Homo FN3478-S Chr7 10296459 Chr4 20466487 0 Translocation 0 Hetero FN3478-S Chr8 18294157 Chr5 24769301 0 Translocation 0 Hetero FN3478-S Chr8 18294163 Chr5 24769787 0 Translocation 0 Hetero FN3478-S Chr12 3519057 Chr11 18869032 0 Translocation 0 Hetero FN3478-S Chr12 3519064 Chr11 18868827 0 Translocation 0 Hetero FN3478-S Chr4 20466485 20517106 0 0 Inversion 0 Hetero OsKitaake04g110800 PCNB_HAEIN Poly(A) polymerase I OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd FN3478-S Chr11 18868823 19127159 0 0 Inversion 0 Homo FN3478-S Chr11 18869039 19127165 0 0 Inversion 0 Homo FN3478-S Chr7 10268001 10294000 0 0 Deletion 25999 OsKitaake07g100700 Q69PU2_ORYSJ Ribosomal RNA apurinic site specific lyase-like OS=Oryza sativa subsp. japonica GN=OSJN FN3478-S Chr1 7156382 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3478-S Chr1 29641898 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3478-S Chr2 28989233 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3478-S Chr2 28991699 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN3478-S Chr3 1898839 G-A 0 0 Single Base Substitution 0 INTRON Homo FN3478-S Chr3 26423653 C-T 0 0 Single Base Substitution 0 INTRON Homo FN3478-S Chr4 13711951 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3478-S Chr6 4647300 A-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3478-S Chr6 10400591 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3478-S Chr6 17779309 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3478-S Chr6 22602713 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN3478-S Chr6 28516579 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3478-S Chr7 7076412 G-T 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN3478-S Chr7 10587493 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3478-S Chr7 19197110 C-A 0 0 Single Base Substitution 0 INTRON Hetero FN3478-S Chr7 19630853 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3478-S Chr7 21807831 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake07g183300 CSLF9_ORYSJ Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=3 SV FN3478-S Chr8 11161332 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3478-S Chr8 28608026 A-T 0 0 Single Base Substitution 0 INTRON Hetero FN3478-S Chr9 901819 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3478-S Chr9 1617420 T-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3478-S Chr10 3270628 C-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN3478-S Chr10 17412033 G-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3478-S Chr10 23542231 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3478-S Chr10 23655861 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3478-S Chr10 23725670 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3478-S Chr11 12000977 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3478-S Chr11 16163861 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3478-S Chr12 15649987 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero