FN3715-S Chr1 10541945 10541947 0 0 Deletion 2 INTERGENIC Hetero FN3715-S Chr1 21311270 21311278 0 0 Deletion 8 INTERGENIC Hetero FN3715-S Chr2 26379478 26379479 0 0 Deletion 1 UTR_3_PRIME Hetero FN3715-S Chr2 33529338 33529346 0 0 Deletion 8 INTERGENIC Homo FN3715-S Chr3 5455052 5455054 0 0 Deletion 2 INTERGENIC Hetero FN3715-S Chr3 10016890 10016902 0 0 Deletion 12 INTERGENIC Hetero FN3715-S Chr3 15108119 15108129 0 0 Deletion 10 INTERGENIC Homo FN3715-S Chr4 7807563 7807564 0 0 Deletion 1 INTERGENIC Hetero FN3715-S Chr4 23126672 23126674 0 0 Deletion 2 INTERGENIC Hetero FN3715-S Chr4 33903931 33903943 0 0 Deletion 12 INTERGENIC Hetero FN3715-S Chr6 3827517 3827529 0 0 Deletion 12 INTRON Hetero FN3715-S Chr6 17914410 17914413 0 0 Deletion 3 INTRON Homo FN3715-S Chr6 20663857 20663859 0 0 Deletion 2 INTERGENIC Hetero FN3715-S Chr7 6308112 6308118 0 0 Deletion 6 INTERGENIC Homo FN3715-S Chr8 10822444 10822448 0 0 Deletion 4 INTERGENIC Hetero FN3715-S Chr8 21137057 21137059 0 0 Deletion 2 INTERGENIC Hetero FN3715-S Chr8 26366761 26366768 0 0 Deletion 7 INTERGENIC Hetero FN3715-S Chr8 27068883 27068892 0 0 Deletion 9 STOP_LOST+CODON_DELETION Hetero OsKitaake08g220400 YJ95_SCHPO Uncharacterized RING finger protein C548.05c OS=Schizosaccharomyces pombe (strain 972 / A FN3715-S Chr8 27706574 27706576 0 0 Deletion 2 INTERGENIC Hetero FN3715-S Chr11 24295840 24295855 0 0 Deletion 15 INTERGENIC Hetero FN3715-S Chr11 24618574 24618585 0 0 Deletion 11 INTERGENIC Hetero FN3715-S Chr12 4831741 4831742 0 0 Deletion 1 INTERGENIC Hetero FN3715-S Chr12 17655925 17655935 0 0 Deletion 10 INTERGENIC Homo FN3715-S Chr5 29548022 29548022 0 0 Insertion 1 INTERGENIC Homo FN3715-S Chr7 6393556 6393556 0 0 Insertion 2 INTRON Hetero FN3715-S Chr3 16744382 16744382 0 0 Insertion 1 Hetero 0 FN3715-S Chr11 1850625 Chr1 18666881 0 Translocation 0 Hetero OsKitaake01g186900 MURG_FLAJ1 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-ace FN3715-S Chr4 35066676 Chr1 18671628 0 Translocation 0 Hetero FN3715-S Chr11 1849194 Chr4 35066677 0 Translocation 0 Hetero FN3715-S Chr1 5073730 5250008 0 0 Inversion 0 Homo OsKitaake01g066800 SF21_HELAN Pollen-specific protein SF21 OS=Helianthus annuus GN=SF21 PE=2 SV=Length=35 FN3715-S Chr1 5073733 5250013 0 0 Inversion 0 Homo OsKitaake01g066800 SF21_HELAN Pollen-specific protein SF21 OS=Helianthus annuus GN=SF21 PE=2 SV=Length=35 FN3715-S Chr6 24089617 24746722 0 0 Inversion 0 Hetero OsKitaake06g213203 Q69WY5_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=P0417G12.10 PE=4 SV=Length=1 FN3715-S Chr6 24089632 24746771 0 0 Inversion 0 Hetero OsKitaake06g213203 Q69WY5_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=P0417G12.10 PE=4 SV=Length=1 FN3715-S Chr1 17797405 18666882 0 0 Inversion 0 Hetero OsKitaake01g186900 MURG_FLAJ1 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-ace FN3715-S Chr1 17797412 18671623 0 0 Inversion 0 Hetero FN3715-S Chr7 1382566 1860488 0 0 Inversion 0 Hetero FN3715-S Chr7 1382570 1860489 0 0 Inversion 0 Hetero FN3715-S Chr11 12757001 12778000 0 0 Deletion 20999 FN3715-S Chr12 20455001 20469000 0 0 Deletion 13999 FN3715-S Chr2 4029001 4075000 0 0 Deletion 45999 OsKitaake02g057000 HMA9_ORYSJ Cation-transporting ATPase HMA5 OS=Oryza sativa subsp. japonica GN=HMA9 PE=2 SV=Length=10 FN3715-S Chr2 4029001 4075000 0 0 Deletion 45999 OsKitaake02g057100 Q6H517_ORYSJ Os02g0172800 protein OS=Oryza sativa subsp. japonica GN=Os02g0172800 PE=2 SV=Length=24 FN3715-S Chr2 4029001 4075000 0 0 Deletion 45999 OsKitaake02g057200 Hypothetical protein FN3715-S Chr2 4029001 4075000 0 0 Deletion 45999 OsKitaake02g057300 URED_ORYSJ Urease accessory protein D OS=Oryza sativa subsp. japonica GN=URED PE=3 SV=Length=30 FN3715-S Chr2 4029001 4075000 0 0 Deletion 45999 OsKitaake02g057400 C97B2_SOYBN Cytochrome P450 97B2, chloroplastic OS=Glycine max GN=CYP97B2 PE=2 SV=Length=57 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g009100 A0A0P0X1U6_ORYSJ Os07g0112351 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os07g0112351 PE= FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g009200 WEX_ARATH Werner Syndrome-like exonuclease OS=Arabidopsis thaliana GN=WEX PE=1 SV=Length=28 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g009300 WEX_ARATH Werner Syndrome-like exonuclease OS=Arabidopsis thaliana GN=WEX PE=1 SV=Length=28 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g009400 WEX_ARATH Werner Syndrome-like exonuclease OS=Arabidopsis thaliana GN=WEX PE=1 SV=Length=28 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g009500 A2XS32_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_15428 PE=4 SV=Len FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g009600 LAML_ARATH Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=Length=17 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g009700 IF5A4_SOLLC Eukaryotic translation initiation factor 5A-4 OS=Solanum lycopersicum PE=2 SV=Length=16 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g009900 A0A0E0ITR0_ORYNI Uncharacterized protein OS=Oryza nivara PE=4 SV=Length=11 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g010000 A0A0E0AF58_9ORYZ Uncharacterized protein OS=Oryza glumipatula PE=4 SV=Length=12 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g009900 A0A0E0ITR0_ORYNI Uncharacterized protein OS=Oryza nivara PE=4 SV=Length=11 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g010000 A0A0E0AF58_9ORYZ Uncharacterized protein OS=Oryza glumipatula PE=4 SV=Length=12 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g010100 A2YHI5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24657 PE=4 SV=Len FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g010200 PP354_ARATH Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g010250 A0A0E0ITQ6_ORYNI Uncharacterized protein OS=Oryza nivara PE=4 SV=Length=60 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g010300 FDL25_ARATH Putative F-box/FBD/LRR-repeat protein At4g03220 OS=Arabidopsis thaliana GN=At4g03220 PE= FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g010400 SRFR1_ARATH Suppressor of RPS4-RLD 1 OS=Arabidopsis thaliana GN=SRFR1 PE=1 SV=Length=105 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g010500 P2C61_ORYSJ Probable protein phosphatase 2C 61 OS=Oryza sativa subsp. japonica GN=Os07g0114000 PE=2 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g010700 HD6_ORYSJ Casein kinase II subunit alpha-2 OS=Oryza sativa subsp. japonica GN=HD6 PE=3 SV=Length=33 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g010600 Y2309_ARATH Uncharacterized protein At2g23090 OS=Arabidopsis thaliana GN=At2g23090 PE=1 SV=Length=7 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g010700 HD6_ORYSJ Casein kinase II subunit alpha-2 OS=Oryza sativa subsp. japonica GN=HD6 PE=3 SV=Length=33 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g010800 Q8H2P6_ORYSJ Os07g0114500 protein OS=Oryza sativa subsp. japonica GN=OJ1138_B05.103 PE=2 SV=Length=1 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g010900 Hypothetical protein FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g011100 A0A0E0Q3D0_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=9 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g011200 A0A0P0X1R4_ORYSJ Os07g0114900 protein OS=Oryza sativa subsp. japonica GN=Os07g0114900 PE=4 SV=Length FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g011300 Q8H2P2_ORYSJ Os07g0115100 protein OS=Oryza sativa subsp. japonica GN=OJ1138_B05.112 PE=4 SV=Length=1 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g011400 A2YHJ7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24669 PE=4 SV=Len FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g011500 PER51_ARATH Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=Length=32 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g011600 BRL2_ARATH Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL2 PE=1 SV=Lengt FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g011700 A0A0N7KMU6_ORYSJ Os07g0115500 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os07g0115500 PE= FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g011800 SCO3_ARATH Protein SNOWY COTYLEDON 3 OS=Arabidopsis thaliana GN=SCO3 PE=1 SV=Length=64 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g011900 A3BG01_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_22878 PE=4 SV=Length=65 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g012100 A0A0P0X1U5_ORYSJ Os07g0115780 protein OS=Oryza sativa subsp. japonica GN=Os07g0115780 PE=4 SV=Length FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g012200 LIMYB_ARATH L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana GN=LIMYB PE=1 SV=L FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g012300 A2YHK6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24679 PE=4 SV=Len FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g012500 HLS1L_ARATH Probable N-acetyltransferase HLS1-like OS=Arabidopsis thaliana GN=At2g23060 PE=2 SV=Leng FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g012600 RGA3_SOLBU Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=Length= FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g012700 RGA2_SOLBU Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=Length=97 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g012800 NDUS7_SOLTU NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Solanum tuberosu FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g012900 RGA3_SOLBU Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=Length= FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g013000 RGA2_SOLBU Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=Length=97 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g013100 RGA3_SOLBU Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=Length= FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g013200 RGA2_SOLBU Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=Length=97 FN3715-S Chr7 758001 1027000 0 0 Deletion 268999 OsKitaake07g013300 RGA3_SOLBU Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=Length= FN3715-S Chr1 7588492 A-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN3715-S Chr1 8459638 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake01g105300 KSG1_ARATH Shaggy-related protein kinase alpha OS=Arabidopsis thaliana GN=ASK1 PE=1 SV=Length=40 FN3715-S Chr1 15214612 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr1 20491119 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr1 20627694 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake01g201400 LYK3_ARATH LysM domain receptor-like kinase 3 OS=Arabidopsis thaliana GN=LYK3 PE=2 SV=Length=65 FN3715-S Chr1 26709615 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr1 36913911 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3715-S Chr1 40605225 A-T 0 0 Single Base Substitution 0 INTRON Hetero FN3715-S Chr2 14741745 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr2 23147278 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr2 26967511 T-C 0 0 Single Base Substitution 0 INTRON Hetero FN3715-S Chr2 28537426 G-T 0 0 Single Base Substitution 0 INTRON Hetero FN3715-S Chr2 30038105 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr3 4310240 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr3 10367166 G-A 0 0 Single Base Substitution 0 UTR_5_PRIME Hetero FN3715-S Chr3 19836019 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3715-S Chr3 25869481 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN3715-S Chr4 240307 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN3715-S Chr4 4952018 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr4 9354946 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr4 12150321 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr5 96773 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr5 10530484 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3715-S Chr6 1028958 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3715-S Chr6 3197866 C-G 0 0 Single Base Substitution 0 UTR_5_PRIME Homo FN3715-S Chr6 14603260 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr6 18054490 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr6 24809201 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN3715-S Chr6 24809202 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake06g220300 SPP_ORYSJ Stromal processing peptidase, chloroplastic OS=Oryza sativa subsp. japonica GN=SPP PE=2 SV FN3715-S Chr7 1639663 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr7 8459035 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3715-S Chr7 20142801 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo OsKitaake07g165400 AB43G_ORYSJ ABC transporter G family member 43 OS=Oryza sativa subsp. japonica GN=ABCG43 PE=2 SV=Len FN3715-S Chr8 16536435 G-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr8 18568499 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr8 20004782 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr8 28580596 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo OsKitaake08g244900 YCF39_CYAPA Uncharacterized protein ycf39 OS=Cyanophora paradoxa GN=ycf39 PE=3 SV=Length=32 FN3715-S Chr9 4754177 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN3715-S Chr9 9353597 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3715-S Chr9 11420789 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr9 17025283 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake09g125900 AMY3A_ORYSJ Alpha-amylase isozyme 3A OS=Oryza sativa subsp. japonica GN=AMY1.2 PE=2 SV=Length=44 FN3715-S Chr10 2650310 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr10 4688419 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr10 16614956 C-A 0 0 Single Base Substitution 0 UTR_5_PRIME Hetero FN3715-S Chr10 18771988 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr10 21785843 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr10 23643643 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr11 5585241 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr11 9065150 A-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr11 10172301 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3715-S Chr11 18872376 G-A 0 0 Single Base Substitution 0 INTRON Hetero FN3715-S Chr11 19635710 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake11g153200 RBR2_ORYSJ Retinoblastoma-related protein 2 OS=Oryza sativa subsp. japonica GN=RBR2 PE=2 SV=Length=9 FN3715-S Chr11 24919116 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr12 5033528 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr12 6869661 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3715-S Chr12 21357834 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero