FN378-S Chr1 37496351 37496355 0 0 Deletion 4 INTRON Hetero FN378-S Chr4 1452437 1452441 0 0 Deletion 4 INTERGENIC Hetero FN378-S Chr6 13414983 13414990 0 0 Deletion 7 INTERGENIC Homo FN378-S Chr10 452192 452194 0 0 Deletion 2 INTERGENIC Hetero FN378-S Chr12 25851782 25851786 0 0 Deletion 4 FRAME_SHIFT Hetero OsKitaake12g213600 NCED5_ORYSJ 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic OS=Oryza sativa subsp. japonica G FN378-S Chr3 7585156 7585156 0 0 Insertion 2 INTERGENIC Hetero FN378-S Chr4 3456228 3456355 0 0 Deletion 127 Hetero 0 FN378-S Chr12 23319238 23319240 0 0 Deletion 2 Hetero 0 FN378-S Chr2 35328984 35328984 0 0 Insertion 2 Hetero 0 FN378-S Chr4 10143274 10143274 0 0 Insertion 1 Hetero 0 FN378-S Chr4 28839002 Chr1 29409484 0 Translocation 0 Hetero OsKitaake04g216501 BRE1A_ORYSJ E3 ubiquitin-protein ligase BRE1-like 1 OS=Oryza sativa subsp. japonica GN=BRE1A PE=2 SV FN378-S Chr4 28839008 Chr1 29409835 0 Translocation 0 Hetero OsKitaake04g216501 BRE1A_ORYSJ E3 ubiquitin-protein ligase BRE1-like 1 OS=Oryza sativa subsp. japonica GN=BRE1A PE=2 SV FN378-S Chr11 27254844 Chr1 29409845 0 Translocation 0 Hetero OsKitaake11g222900 ATD1A_DANRE ATPase family AAA domain-containing protein 1-A OS=Danio rerio GN=atad1a PE=2 SV=Length= FN378-S Chr11 28606058 Chr1 29415079 0 Translocation 0 Hetero OsKitaake11g234400 JAMYB_ORYSJ Transcription factor JAMYB OS=Oryza sativa subsp. japonica GN=JAMYB PE=2 SV=Length=28 FN378-S Chr2 3021038 Chr1 36541391 0 Translocation 0 Hetero OsKitaake01g388200 AMT23_ORYSJ Ammonium transporter 2 member 3 OS=Oryza sativa subsp. japonica GN=AMT2-3 PE=2 SV=Length FN378-S Chr2 3021338 Chr1 36541408 0 Translocation 0 Hetero OsKitaake01g388200 AMT23_ORYSJ Ammonium transporter 2 member 3 OS=Oryza sativa subsp. japonica GN=AMT2-3 PE=2 SV=Length FN378-S Chr4 28839002 Chr1 29409484 0 Translocation 0 Hetero OsKitaake01g287900 LPP2_ARATH Lipid phosphate phosphatase 2 OS=Arabidopsis thaliana GN=LPP2 PE=2 SV=Length=29 FN378-S Chr4 28839008 Chr1 29409835 0 Translocation 0 Hetero OsKitaake01g287900 LPP2_ARATH Lipid phosphate phosphatase 2 OS=Arabidopsis thaliana GN=LPP2 PE=2 SV=Length=29 FN378-S Chr11 27254844 Chr1 29409845 0 Translocation 0 Hetero OsKitaake01g287900 LPP2_ARATH Lipid phosphate phosphatase 2 OS=Arabidopsis thaliana GN=LPP2 PE=2 SV=Length=29 FN378-S Chr11 27838904 28606067 0 0 Inversion 0 Hetero OsKitaake11g227600 DRMH1_ARATH Dormancy-associated protein homolog 1 OS=Arabidopsis thaliana GN=DRMH1 PE=1 SV=Length=10 FN378-S Chr11 27838904 28606067 0 0 Inversion 0 Hetero OsKitaake11g234400 JAMYB_ORYSJ Transcription factor JAMYB OS=Oryza sativa subsp. japonica GN=JAMYB PE=2 SV=Length=28 FN378-S Chr1 6369766 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN378-S Chr1 14017902 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN378-S Chr1 16861775 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN378-S Chr1 23672561 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN378-S Chr1 37824670 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN378-S Chr2 33589377 T-A 0 0 Single Base Substitution 0 SPLICE_SITE_REGION Homo FN378-S Chr3 4961395 G-A 0 0 Single Base Substitution 0 INTRON Homo FN378-S Chr3 12111593 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN378-S Chr3 26107124 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN378-S Chr5 7303872 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN378-S Chr5 15281572 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN378-S Chr7 7369191 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN378-S Chr7 15689230 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN378-S Chr7 15924300 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN378-S Chr7 28968642 T-A 0 0 Single Base Substitution 0 UTR_5_PRIME Hetero FN378-S Chr11 639211 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN378-S Chr11 5549487 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN378-S Chr11 6496844 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN378-S Chr11 16998377 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN378-S Chr12 602383 C-A 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN378-S Chr12 15634417 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo