FN3861-S Chr1 25693350 25693361 0 0 Deletion 11 INTRON Hetero FN3861-S Chr1 36910877 36910890 0 0 Deletion 13 INTRON Hetero FN3861-S Chr5 12916397 12916398 0 0 Deletion 1 INTERGENIC Homo FN3861-S Chr7 17524091 17524102 0 0 Deletion 11 INTERGENIC Homo FN3861-S Chr7 25406639 25406645 0 0 Deletion 6 INTERGENIC Homo FN3861-S Chr8 16424952 16424960 0 0 Deletion 8 INTERGENIC Hetero FN3861-S Chr1 8972525 8972525 0 0 Insertion 2 INTERGENIC Hetero FN3861-S Chr5 16138841 16138841 0 0 Insertion 2 INTERGENIC Hetero FN3861-S Chr8 2057418 Chr6 30680818 0 Translocation 0 Hetero OsKitaake08g024100 A0A0E0CPG4_9ORYZ Uncharacterized protein OS=Oryza meridionalis PE=4 SV=Length=15 FN3861-S Chr8 2057420 Chr6 30680328 0 Translocation 0 Hetero OsKitaake08g024100 A0A0E0CPG4_9ORYZ Uncharacterized protein OS=Oryza meridionalis PE=4 SV=Length=15 FN3861-S Chr8 2057418 Chr6 30680818 0 Translocation 0 Hetero OsKitaake06g289600 CHI3_ORYSJ Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=Length=32 FN3861-S Chr8 2057420 Chr6 30680328 0 Translocation 0 Hetero OsKitaake06g289600 CHI3_ORYSJ Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=Length=32 FN3861-S Chr5 1309727 Chr4 25804970 0 Translocation 0 Hetero FN3861-S Chr5 9979817 Chr4 24882903 0 Translocation 0 Hetero FN3861-S Chr9 6970207 Chr1 6990310 0 Translocation 0 Hetero FN3861-S Chr9 6970211 Chr1 6990426 0 Translocation 0 Hetero FN3861-S Chr1 36805142 36912688 0 0 Inversion 0 Homo OsKitaake01g391400 SAC3A_ARATH SAC3 family protein A OS=Arabidopsis thaliana GN=SAC3A PE=1 SV=Length=100 FN3861-S Chr1 36662705 36912688 0 0 Inversion 0 Homo OsKitaake01g393100 C7IWY2_ORYSJ Os01g0838350 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os01g0838350 PE=4 SV FN3861-S Chr1 36805142 36912688 0 0 Inversion 0 Homo OsKitaake01g393100 C7IWY2_ORYSJ Os01g0838350 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os01g0838350 PE=4 SV FN3861-S Chr10 12628579 12675366 0 0 Inversion 0 Hetero FN3861-S Chr10 12628587 12675368 0 0 Inversion 0 Hetero FN3861-S Chr1 6991001 7011000 0 0 Deletion 19999 OsKitaake01g087900 BAC2_ARATH Mitochondrial arginine transporter BAC2 OS=Arabidopsis thaliana GN=BAC2 PE=1 SV=Length=29 FN3861-S Chr1 6991001 7011000 0 0 Deletion 19999 OsKitaake01g087908 Hypothetical protein FN3861-S Chr2 23695001 23705000 0 0 Deletion 9999 OsKitaake02g232700 Y3739_ARATH Uncharacterized membrane protein At3g27390 OS=Arabidopsis thaliana GN=At3g27390 PE=1 SV= FN3861-S Chr2 23695001 23705000 0 0 Deletion 9999 OsKitaake02g232800 KCR1_ARATH Very-long-chain 3-oxoacyl-CoA reductase 1 OS=Arabidopsis thaliana GN=KCR1 PE=1 SV=Length= FN3861-S Chr2 23695001 23705000 0 0 Deletion 9999 OsKitaake02g232900 A0A0D3F767_9ORYZ Uncharacterized protein OS=Oryza barthii PE=4 SV=Length=9 FN3861-S Chr3 29638001 29646000 0 0 Deletion 7999 OsKitaake03g308900 PLA23_ORYSJ Phospholipase A2 homolog 3 OS=Oryza sativa subsp. japonica GN=PLA2-III PE=1 SV=Length=16 FN3861-S Chr9 14628001 14740000 0 0 Deletion 111999 OsKitaake09g099800 GOS11_ARATH Golgi SNAP receptor complex member 1-1 OS=Arabidopsis thaliana GN=GOS11 PE=2 SV=Length=2 FN3861-S Chr9 14628001 14740000 0 0 Deletion 111999 OsKitaake09g099850 Hypothetical protein FN3861-S Chr9 14628001 14740000 0 0 Deletion 111999 OsKitaake09g099900 CAF1G_ARATH Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=Le FN3861-S Chr9 14628001 14740000 0 0 Deletion 111999 OsKitaake09g100000 Hypothetical protein FN3861-S Chr9 14628001 14740000 0 0 Deletion 111999 OsKitaake09g099900 CAF1G_ARATH Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=Le FN3861-S Chr9 14628001 14740000 0 0 Deletion 111999 OsKitaake09g100100 PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10 PE=2 SV=Length=62 FN3861-S Chr9 14628001 14740000 0 0 Deletion 111999 OsKitaake09g100200 Hypothetical protein FN3861-S Chr9 14628001 14740000 0 0 Deletion 111999 OsKitaake09g100300 BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2 SV=Length=35 FN3861-S Chr9 14628001 14740000 0 0 Deletion 111999 OsKitaake09g100400 PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400 OS=Arabidopsis thaliana GN=At5g614 FN3861-S Chr9 14628001 14740000 0 0 Deletion 111999 OsKitaake09g100500 WRK76_ORYSI WRKY transcription factor WRKY76 OS=Oryza sativa subsp. indica GN=WRKY76 PE=2 SV=Length= FN3861-S Chr9 14628001 14740000 0 0 Deletion 111999 OsKitaake09g100600 WRK62_ORYSJ WRKY transcription factor WRKY62 OS=Oryza sativa subsp. japonica GN=WRKY62 PE=1 SV=Lengt FN3861-S Chr9 14628001 14740000 0 0 Deletion 111999 OsKitaake09g100700 CIPKG_ORYSJ CBL-interacting protein kinase 16 OS=Oryza sativa subsp. japonica GN=CIPK16 PE=2 SV=Leng FN3861-S Chr9 14628001 14740000 0 0 Deletion 111999 OsKitaake09g100800 CIPKR_ORYSJ Putative CBL-interacting protein kinase 27 OS=Oryza sativa subsp. japonica GN=CIPK27 PE= FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g100900 A0A0E0IJM0_ORYNI Uncharacterized protein OS=Oryza nivara PE=4 SV=Length=9 FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g101000 A0A0E0ES95_9ORYZ Uncharacterized protein OS=Oryza meridionalis PE=4 SV=Length=10 FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g101100 CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=Length=34 FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g101200 A0A0E0QRH1_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=30 FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g101300 R1442_DANRE Probable E3 ubiquitin-protein ligase RNF144A-B OS=Danio rerio GN=rnf144ab PE=2 SV=Length FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g101400 RN217_XENLA Probable E3 ubiquitin-protein ligase RNF217 OS=Xenopus laevis GN=rnf217 PE=2 SV=Length=2 FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g101500 R1441_DANRE Probable E3 ubiquitin-protein ligase RNF144A-A OS=Danio rerio GN=rnf144aa PE=3 SV=Length FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g101600 R1442_DANRE Probable E3 ubiquitin-protein ligase RNF144A-B OS=Danio rerio GN=rnf144ab PE=2 SV=Length FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g101800 GUAA_HELHP Probable GMP synthase [glutamine-hydrolyzing] OS=Helicobacter hepaticus (strain ATCC 5144 FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g101901 A0A0E0IJM9_ORYNI Uncharacterized protein OS=Oryza nivara PE=4 SV=Length=12 FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g102000 PSMD9_MOUSE 26S proteasome non-ATPase regulatory subunit 9 OS=Mus musculus GN=Psmd9 PE=1 SV=Length=2 FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g102100 CX171_ARATH Cytochrome c oxidase copper chaperone 1 OS=Arabidopsis thaliana GN=COX17-1 PE=2 SV=Lengt FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g102200 RUB1_ORYSJ Ubiquitin-NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=2 SV=Length= FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g102300 NPY1_ARATH BTB/POZ domain-containing protein NPY1 OS=Arabidopsis thaliana GN=NPY1 PE=2 SV=Length=57 FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g102400 DHYS_MUSAC Deoxyhypusine synthase OS=Musa acuminata GN=DHS PE=2 SV=Length=37 FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g102500 KN7I_ORYSJ Kinesin-like protein KIN-7I OS=Oryza sativa subsp. japonica GN=KIN7I PE=2 SV=Length=121 FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g102600 PLDA1_ARATH Phospholipase D alpha 1 OS=Arabidopsis thaliana GN=PLDALPHA1 PE=1 SV=Length=81 FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g102701 A0A0N7KQT7_ORYSJ Os09g0421400 protein OS=Oryza sativa subsp. japonica GN=Os09g0421400 PE=4 SV=Length FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g102800 Q69P61_ORYSJ Os09g0421500 protein OS=Oryza sativa subsp. japonica GN=OJ1740_D06.19-1 PE=2 SV=Length= FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g102900 UBA1C_ARATH UBP1-associated proteins 1C OS=Arabidopsis thaliana GN=UBA1C PE=3 SV=Length=61 FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g103000 ZN346_XENLA Zinc finger protein 346 OS=Xenopus laevis GN=znf346 PE=1 SV=Length=52 FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g103100 Z385D_RAT Zinc finger protein 385D OS=Rattus norvegicus GN=Znf385d PE=2 SV=Length=39 FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g103300 PHT1_ORYSJ Putrescine hydroxycinnamoyltransferase 1 OS=Oryza sativa subsp. japonica GN=PHT1 PE=2 SV= FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g103500 CESA9_ORYSJ Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica G FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g103600 AUG8_ARATH AUGMIN subunit 8 OS=Arabidopsis thaliana GN=AUG8 PE=1 SV=Length=64 FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g103700 Y2241_ARATH Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 OS= FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g103800 PP342_ARATH Pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Arabidopsis thal FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g103900 FBT6_ARATH Probable folate-biopterin transporter 6 OS=Arabidopsis thaliana GN=At5g10820 PE=2 SV=Leng FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g104000 ASPA_ARATH Aspartyl protease family protein At5g10770 OS=Arabidopsis thaliana GN=At5g10770 PE=2 SV=L FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g104100 MGDG1_ORYSJ Probable monogalactosyldiacylglycerol synthase 1, chloroplastic OS=Oryza sativa subsp. j FN3861-S Chr9 14746001 15052000 0 0 Deletion 305999 OsKitaake09g104200 SPA_SOLLC Protein SPA, chloroplastic OS=Solanum lycopersicum GN=SPA PE=2 SV=Length=15 FN3861-S Chr1 7570211 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake01g095000 P4KG4_ARATH Phosphatidylinositol 4-kinase gamma 4 OS=Arabidopsis thaliana GN=PI4KG4 PE=1 SV=Length=5 FN3861-S Chr1 8055977 T-A 0 0 Single Base Substitution 0 INTRON Homo FN3861-S Chr1 13130461 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3861-S Chr1 23518882 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN3861-S Chr1 36148596 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN3861-S Chr1 36148773 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3861-S Chr1 39746633 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3861-S Chr2 960792 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3861-S Chr2 2064806 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3861-S Chr2 18914814 A-G 0 0 Single Base Substitution 0 INTRON Hetero FN3861-S Chr3 13310054 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3861-S Chr3 34904982 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3861-S Chr4 8394120 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3861-S Chr4 17667782 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3861-S Chr4 29660285 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3861-S Chr4 35596582 G-T 0 0 Single Base Substitution 0 INTRON Homo FN3861-S Chr5 1266744 C-A 0 0 Single Base Substitution 0 INTRON Hetero FN3861-S Chr5 9980405 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3861-S Chr5 12916861 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3861-S Chr5 16009971 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3861-S Chr7 16080192 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN3861-S Chr7 22406973 C-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN3861-S Chr8 1330020 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3861-S Chr8 4353286 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3861-S Chr8 7121098 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3861-S Chr8 12440460 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3861-S Chr8 19119978 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3861-S Chr8 19460303 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3861-S Chr8 20644049 T-C 0 0 Single Base Substitution 0 UTR_3_PRIME Homo FN3861-S Chr9 3869058 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3861-S Chr9 6685489 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3861-S Chr10 6434307 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3861-S Chr10 14602746 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3861-S Chr11 6350926 C-T 0 0 Single Base Substitution 0 INTRON Homo FN3861-S Chr11 23866437 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3861-S Chr12 13502263 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero