FN3901-S Chr1 9484885 9484886 0 0 Deletion 1 INTERGENIC Hetero FN3901-S Chr1 29628214 29628220 0 0 Deletion 6 UTR_5_PRIME Homo FN3901-S Chr2 5945194 5945200 0 0 Deletion 6 UTR_3_PRIME Hetero FN3901-S Chr3 7110908 7110910 0 0 Deletion 2 INTERGENIC Hetero FN3901-S Chr4 14628765 14628766 0 0 Deletion 1 INTERGENIC Hetero FN3901-S Chr5 5358590 5358593 0 0 Deletion 3 INTERGENIC Hetero FN3901-S Chr7 28652947 28652956 0 0 Deletion 9 INTRON Hetero FN3901-S Chr9 19708715 19708719 0 0 Deletion 4 INTRON Hetero FN3901-S Chr10 23946962 23946964 0 0 Deletion 2 INTERGENIC Hetero FN3901-S Chr11 20115101 20115109 0 0 Deletion 8 INTERGENIC Homo FN3901-S Chr4 30445616 30445616 0 0 Insertion 7 INTRON Hetero FN3901-S Chr5 23262244 23262244 0 0 Insertion 3 INTERGENIC Hetero FN3901-S Chr3 26683763 26683765 0 0 Deletion 2 Hetero 0 FN3901-S Chr12 13809153 13809154 0 0 Deletion 1 Hetero 0 FN3901-S Chr7 5165837 Chr4 653234 0 Translocation 0 Hetero OsKitaake07g063000 NAC47_ARATH NAC transcription factor 47 OS=Arabidopsis thaliana GN=NAC047 PE=2 SV=Length=35 FN3901-S Chr7 5165838 Chr4 652697 0 Translocation 0 Hetero OsKitaake07g063000 NAC47_ARATH NAC transcription factor 47 OS=Arabidopsis thaliana GN=NAC047 PE=2 SV=Length=35 FN3901-S Chr8 14170864 Chr4 19669207 0 Translocation 0 Hetero FN3901-S Chr8 14170865 Chr4 19669404 0 Translocation 0 Hetero FN3901-S Chr4 615001 652000 0 0 Deletion 36999 OsKitaake04g004700 LRK32_ARATH Putative inactive L-type lectin-domain containing receptor kinase III.2 OS=Arabidopsis t FN3901-S Chr4 615001 652000 0 0 Deletion 36999 OsKitaake04g004800 A0A0D9ZGD8_9ORYZ Uncharacterized protein OS=Oryza glumipatula PE=4 SV=Length=19 FN3901-S Chr4 615001 652000 0 0 Deletion 36999 OsKitaake04g004900 SWI3D_ARATH SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana GN=SWI3D PE=1 SV=Length=98 FN3901-S Chr4 615001 652000 0 0 Deletion 36999 OsKitaake04g005000 CAES_ARATH Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana GN=At4g34215 PE=1 SV=Len FN3901-S Chr4 615001 652000 0 0 Deletion 36999 OsKitaake04g005100 PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana GN=PCMP-E2 FN3901-S Chr4 615001 652000 0 0 Deletion 36999 OsKitaake04g005200 RBP2_PANTR E3 SUMO-protein ligase RanBP2 OS=Pan troglodytes GN=RANBP2 PE=1 SV=Length=322 FN3901-S Chr4 615001 652000 0 0 Deletion 36999 OsKitaake04g005250 A0A0P0W5Y8_ORYSJ Os04g0110700 protein OS=Oryza sativa subsp. japonica GN=Os04g0110700 PE=4 SV=Length FN3901-S Chr1 18139617 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3901-S Chr1 18297919 T-C 0 0 Single Base Substitution 0 INTRON Hetero FN3901-S Chr1 31928113 G-A 0 0 Single Base Substitution 0 INTRON Hetero FN3901-S Chr2 4929539 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN3901-S Chr2 9467216 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3901-S Chr2 10381683 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3901-S Chr2 13177711 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3901-S Chr2 19097429 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3901-S Chr2 19662473 G-T 0 0 Single Base Substitution 0 STOP_GAINED Hetero OsKitaake02g192100 SM3L2_ARATH DNA repair protein RAD5A OS=Arabidopsis thaliana GN=RAD5A PE=1 SV=Length=102 FN3901-S Chr2 27077748 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3901-S Chr2 28072810 C-A 0 0 Single Base Substitution 0 SPLICE_SITE_DONOR Hetero OsKitaake02g283000 AGO1A_ORYSJ Protein argonaute 1A OS=Oryza sativa subsp. japonica GN=AGO1A PE=2 SV=Length=108 FN3901-S Chr3 15238253 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3901-S Chr3 30236474 T-A 0 0 Single Base Substitution 0 INTRON Hetero FN3901-S Chr4 23720810 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3901-S Chr4 23720811 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3901-S Chr4 23720812 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3901-S Chr5 27269218 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3901-S Chr6 6372325 T-C 0 0 Single Base Substitution 0 INTRON Homo FN3901-S Chr6 15176149 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3901-S Chr6 18272034 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3901-S Chr7 5777746 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN3901-S Chr7 16372000 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3901-S Chr8 21117759 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake08g158500 CCZ_ORYSJ Vacuolar fusion protein CCZ1 homolog OS=Oryza sativa subsp. japonica GN=CCZ1 PE=2 SV=Lengt FN3901-S Chr9 3576727 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3901-S Chr9 3576728 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3901-S Chr9 9465001 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3901-S Chr9 9692203 G-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN3901-S Chr9 11120795 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3901-S Chr9 13842378 G-T 0 0 Single Base Substitution 0 INTRON Hetero FN3901-S Chr9 14487261 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3901-S Chr9 14487263 T-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3901-S Chr10 9801338 T-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN3901-S Chr10 18960205 G-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3901-S Chr10 19147921 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3901-S Chr11 8662701 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3901-S Chr12 16211967 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3901-S Chr12 16211968 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero