FN3939-S Chr3 21958301 21958302 0 0 Deletion 1 INTERGENIC Hetero FN3939-S Chr4 15732511 15732515 0 0 Deletion 4 INTERGENIC Homo FN3939-S Chr4 24769459 24769462 0 0 Deletion 3 INTERGENIC Homo FN3939-S Chr5 6756118 6756150 0 0 Deletion 32 INTRON Hetero FN3939-S Chr6 13604754 13604755 0 0 Deletion 1 INTERGENIC Hetero FN3939-S Chr8 2472567 2472580 0 0 Deletion 13 INTERGENIC Hetero FN3939-S Chr10 12631281 12631286 0 0 Deletion 5 UTR_3_PRIME Homo FN3939-S Chr11 6363395 6363403 0 0 Deletion 8 INTERGENIC Hetero FN3939-S Chr11 8354658 8354670 0 0 Deletion 12 CODON_DELETION Hetero OsKitaake11g091000 RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=Length=92 FN3939-S Chr11 24845481 24845482 0 0 Deletion 1 INTERGENIC Hetero FN3939-S Chr12 9214319 9214328 0 0 Deletion 9 INTERGENIC Homo FN3939-S Chr11 12487231 12487240 0 0 Deletion 9 Hetero 0 FN3939-S Chr4 29052614 Chr1 22330315 0 Translocation 0 Hetero OsKitaake04g219600 SCL6_ARATH Scarecrow-like protein 6 OS=Arabidopsis thaliana GN=SCL6 PE=1 SV=Length=55 FN3939-S Chr4 29052949 Chr1 22330303 0 Translocation 0 Hetero OsKitaake04g219600 SCL6_ARATH Scarecrow-like protein 6 OS=Arabidopsis thaliana GN=SCL6 PE=1 SV=Length=55 FN3939-S Chr4 29052614 Chr1 22330315 0 Translocation 0 Hetero OsKitaake01g213600 CRK15_ARATH Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=L FN3939-S Chr4 29052949 Chr1 22330303 0 Translocation 0 Hetero OsKitaake01g213600 CRK15_ARATH Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=L FN3939-S Chr12 2241384 2661979 0 0 Inversion 0 Hetero OsKitaake12g034700 DMC1_LILLO Meiotic recombination protein DMC1 homolog OS=Lilium longiflorum GN=LIM15 PE=2 SV=Length= FN3939-S Chr12 2241390 2661986 0 0 Inversion 0 Hetero OsKitaake12g034700 DMC1_LILLO Meiotic recombination protein DMC1 homolog OS=Lilium longiflorum GN=LIM15 PE=2 SV=Length= FN3939-S Chr1 36774968 37365254 0 0 Inversion 0 Homo OsKitaake01g399000 AKRCA_ARATH Aldo-keto reductase family 4 member C10 OS=Arabidopsis thaliana GN=AKR4C10 PE=1 SV=Lengt FN3939-S Chr1 36774984 37365327 0 0 Inversion 0 Homo OsKitaake01g399000 AKRCA_ARATH Aldo-keto reductase family 4 member C10 OS=Arabidopsis thaliana GN=AKR4C10 PE=1 SV=Lengt FN3939-S Chr10 12607400 13525262 0 0 Inversion 0 Homo OsKitaake10g081500 RCCR_HORVU Red chlorophyll catabolite reductase (Fragment) OS=Hordeum vulgare GN=rccR PE=1 SV=Length FN3939-S Chr10 12607413 13525264 0 0 Inversion 0 Homo OsKitaake10g081500 RCCR_HORVU Red chlorophyll catabolite reductase (Fragment) OS=Hordeum vulgare GN=rccR PE=1 SV=Length FN3939-S Chr12 2241384 2661979 0 0 Inversion 0 Hetero OsKitaake12g039200 Q2QXL8_ORYSJ Hydrolase, alpha/beta fold family protein, putative, expressed OS=Oryza sativa subsp. j FN3939-S Chr12 2241390 2661986 0 0 Inversion 0 Hetero OsKitaake12g039200 Q2QXL8_ORYSJ Hydrolase, alpha/beta fold family protein, putative, expressed OS=Oryza sativa subsp. j FN3939-S Chr1 24020001 24093000 0 0 Deletion 72999 OsKitaake01g230900 SCGT_TOBAC Scopoletin glucosyltransferase OS=Nicotiana tabacum GN=TOGT1 PE=1 SV=Length=47 FN3939-S Chr1 24020001 24093000 0 0 Deletion 72999 OsKitaake01g231000 SCGT_TOBAC Scopoletin glucosyltransferase OS=Nicotiana tabacum GN=TOGT1 PE=1 SV=Length=47 FN3939-S Chr1 24020001 24093000 0 0 Deletion 72999 OsKitaake01g231100 CNBL5_ORYSJ Calcineurin B-like protein 5 OS=Oryza sativa subsp. japonica GN=CBL5 PE=2 SV=Length=21 FN3939-S Chr1 24020001 24093000 0 0 Deletion 72999 OsKitaake01g231200 FDL1_ARATH F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana GN=At1g13570 PE=2 SV=Lengt FN3939-S Chr1 24020001 24093000 0 0 Deletion 72999 OsKitaake01g231100 CNBL5_ORYSJ Calcineurin B-like protein 5 OS=Oryza sativa subsp. japonica GN=CBL5 PE=2 SV=Length=21 FN3939-S Chr1 24020001 24093000 0 0 Deletion 72999 OsKitaake01g231300 APF2_ARATH Aspartyl protease family protein 2 OS=Arabidopsis thaliana GN=APF2 PE=2 SV=Length=48 FN3939-S Chr1 24020001 24093000 0 0 Deletion 72999 OsKitaake01g231400 CTU1_ORYSJ Cytoplasmic tRNA 2-thiolation protein 1 OS=Oryza sativa subsp. japonica GN=NCS6 PE=2 SV=L FN3939-S Chr12 2840001 3010000 0 0 Deletion 169999 OsKitaake12g042600 A2ZI83_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_37527 PE=4 SV=Len FN3939-S Chr12 2840001 3010000 0 0 Deletion 169999 OsKitaake12g042700 NAC90_ARATH NAC domain-containing protein 90 OS=Arabidopsis thaliana GN=NAC090 PE=2 SV=Length=23 FN3939-S Chr12 2840001 3010000 0 0 Deletion 169999 OsKitaake12g042800 BZP68_ARATH bZIP transcription factor 68 OS=Arabidopsis thaliana GN=BZIP68 PE=1 SV=Length=38 FN3939-S Chr12 2840001 3010000 0 0 Deletion 169999 OsKitaake12g042900 DCP1_ARATH mRNA-decapping enzyme-like protein OS=Arabidopsis thaliana GN=At1g08370 PE=1 SV=Length=36 FN3939-S Chr12 2840001 3010000 0 0 Deletion 169999 OsKitaake12g043000 FB322_ARATH Probable F-box protein At2g36090 OS=Arabidopsis thaliana GN=At2g36090 PE=2 SV=Length=31 FN3939-S Chr12 2840001 3010000 0 0 Deletion 169999 OsKitaake12g043200 CAAT6_ARATH Cationic amino acid transporter 6, chloroplastic OS=Arabidopsis thaliana GN=CAT6 PE=2 SV FN3939-S Chr12 2840001 3010000 0 0 Deletion 169999 OsKitaake12g043400 PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780 OS=Arabidopsis thaliana GN=PCMP-H1 FN3939-S Chr12 2840001 3010000 0 0 Deletion 169999 OsKitaake12g043450 Hypothetical protein FN3939-S Chr12 2840001 3010000 0 0 Deletion 169999 OsKitaake12g043500 Y1160_ORYSJ B3 domain-containing protein Os11g0156000 OS=Oryza sativa subsp. japonica GN=Os11g015600 FN3939-S Chr12 2840001 3010000 0 0 Deletion 169999 OsKitaake12g043400 PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780 OS=Arabidopsis thaliana GN=PCMP-H1 FN3939-S Chr12 2840001 3010000 0 0 Deletion 169999 OsKitaake12g043500 Y1160_ORYSJ B3 domain-containing protein Os11g0156000 OS=Oryza sativa subsp. japonica GN=Os11g015600 FN3939-S Chr12 2840001 3010000 0 0 Deletion 169999 OsKitaake12g043600 A0A0E0J6Z0_ORYNI Uncharacterized protein OS=Oryza nivara PE=4 SV=Length=91 FN3939-S Chr12 2840001 3010000 0 0 Deletion 169999 OsKitaake12g043700 TLDC1_CHICK TLD domain-containing protein 1 OS=Gallus gallus GN=TLDC1 PE=2 SV=Length=46 FN3939-S Chr12 2840001 3010000 0 0 Deletion 169999 OsKitaake12g043900 A0A0P0Y730_ORYSJ Os12g0157700 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os12g0157700 PE= FN3939-S Chr12 2840001 3010000 0 0 Deletion 169999 OsKitaake12g044000 OPF13_ARATH Transcription repressor OFP13 OS=Arabidopsis thaliana GN=OFP13 PE=2 SV=Length=26 FN3939-S Chr12 2840001 3010000 0 0 Deletion 169999 OsKitaake12g044100 OFP8_ORYSJ Transcription repressor OFP8 OS=Oryza sativa subsp. japonica GN=OFP8 PE=1 SV=Length=22 FN3939-S Chr1 1719970 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3939-S Chr1 9797759 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3939-S Chr1 10805114 G-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN3939-S Chr1 14800064 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3939-S Chr1 15237482 G-A 0 0 Single Base Substitution 0 INTRON Homo FN3939-S Chr1 24306012 G-A 0 0 Single Base Substitution 0 INTRON Homo FN3939-S Chr1 29614326 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3939-S Chr1 30322980 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3939-S Chr1 33652588 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3939-S Chr2 6515322 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3939-S Chr3 5197390 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3939-S Chr3 34814034 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3939-S Chr4 5484090 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3939-S Chr4 12610820 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3939-S Chr4 22486077 C-G 0 0 Single Base Substitution 0 INTRON Homo FN3939-S Chr5 3791452 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3939-S Chr5 8520516 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3939-S Chr6 14062000 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3939-S Chr6 23806914 A-T 0 0 Single Base Substitution 0 INTRON Hetero FN3939-S Chr6 24731998 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3939-S Chr9 567525 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3939-S Chr9 567526 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3939-S Chr11 9994559 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3939-S Chr11 13385896 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3939-S Chr11 15332158 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3939-S Chr11 26739205 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3939-S Chr12 3568563 G-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3939-S Chr12 18650621 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN3939-S Chr12 25442335 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo