FN3945-S Chr1 10556286 10556299 0 0 Deletion 13 INTERGENIC Hetero FN3945-S Chr1 37808750 37808759 0 0 Deletion 9 INTERGENIC Hetero FN3945-S Chr1 39330849 39330864 0 0 Deletion 15 INTERGENIC Hetero FN3945-S Chr1 39603950 39603961 0 0 Deletion 11 INTRON Hetero FN3945-S Chr1 43885170 43885193 0 0 Deletion 23 SPLICE_SITE_DONOR Homo OsKitaake01g488800 HTPX2_METMA Protease HtpX homolog 2 OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / FN3945-S Chr3 21951669 21951671 0 0 Deletion 2 INTERGENIC Hetero FN3945-S Chr4 8424089 8424090 0 0 Deletion 1 INTERGENIC Hetero FN3945-S Chr6 3218036 3218050 0 0 Deletion 14 FRAME_SHIFT Hetero OsKitaake06g045100 MYB98_ARATH Transcription factor MYB98 OS=Arabidopsis thaliana GN=MYB98 PE=2 SV=Length=42 FN3945-S Chr6 7486328 7486330 0 0 Deletion 2 INTRON Homo FN3945-S Chr7 5372849 5372851 0 0 Deletion 2 INTERGENIC Homo FN3945-S Chr1 11265399 11265399 0 0 Insertion 2 INTERGENIC Hetero FN3945-S Chr1 38734287 38734287 0 0 Insertion 7 INTERGENIC Hetero FN3945-S Chr4 31881585 31881585 0 0 Insertion 4 UTR_5_PRIME Hetero FN3945-S Chr5 16987625 16987625 0 0 Insertion 2 INTRON Hetero FN3945-S Chr10 13151974 13151974 0 0 Insertion 1 INTERGENIC Hetero FN3945-S Chr9 2755486 2755651 0 0 Deletion 165 Hetero 0 FN3945-S Chr5 27659356 Chr3 7823147 0 Translocation 0 Hetero OsKitaake05g252600 BTS_ARATH Zinc finger protein BRUTUS OS=Arabidopsis thaliana GN=BTS PE=1 SV=Length=125 FN3945-S Chr11 17574957 Chr5 27659353 0 Translocation 0 Hetero OsKitaake11g137700 LAZY1_ORYSJ Protein LAZY 1 OS=Oryza sativa subsp. japonica GN=LA1 PE=2 SV=Length=41 FN3945-S Chr11 17574962 Chr5 27633348 0 Translocation 0 Hetero OsKitaake11g137700 LAZY1_ORYSJ Protein LAZY 1 OS=Oryza sativa subsp. japonica GN=LA1 PE=2 SV=Length=41 FN3945-S Chr3 7904547 Chr1 41759052 0 Translocation 0 Hetero OsKitaake01g456600 ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=Length=49 FN3945-S Chr11 17574957 Chr5 27659353 0 Translocation 0 Hetero OsKitaake05g252600 BTS_ARATH Zinc finger protein BRUTUS OS=Arabidopsis thaliana GN=BTS PE=1 SV=Length=125 FN3945-S Chr12 18208990 Chr3 6840220 0 Translocation 0 Hetero OsKitaake03g097000 CMT1_ORYSJ DNA (cytosine-5)-methyltransferase CMT1 OS=Oryza sativa subsp. japonica GN=CMT1 PE=3 SV=L FN3945-S Chr12 18249451 Chr5 27664526 0 Translocation 0 Hetero OsKitaake05g252700 A0A0E0PQV3_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=91 FN3945-S Chr5 27664533 28016839 0 0 Inversion 0 Hetero OsKitaake05g252700 A0A0E0PQV3_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=91 FN3945-S Chr5 27633336 28016830 0 0 Inversion 0 Hetero OsKitaake05g258500 A0A0E0PR27_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=90 FN3945-S Chr5 27664533 28016839 0 0 Inversion 0 Hetero OsKitaake05g258500 A0A0E0PR27_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=90 FN3945-S Chr12 18206001 18251000 0 0 Deletion 44999 OsKitaake12g133600 FB135_ARATH F-box protein At3g07870 OS=Arabidopsis thaliana GN=At3g07870 PE=2 SV=Length=41 FN3945-S Chr12 18206001 18251000 0 0 Deletion 44999 OsKitaake12g133650 B8BPR1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_38389 PE=4 SV=Len FN3945-S Chr12 18206001 18251000 0 0 Deletion 44999 OsKitaake12g133700 FB10_ARATH Putative F-box protein At1g19160 OS=Arabidopsis thaliana GN=At1g19160 PE=4 SV=Length=35 FN3945-S Chr12 18206001 18251000 0 0 Deletion 44999 OsKitaake12g133800 PUM8_ARATH Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana GN=APUM8 PE=3 SV=Length FN3945-S Chr1 4304317 T-A 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN3945-S Chr1 4304318 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN3945-S Chr1 26036046 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3945-S Chr1 41252873 A-G 0 0 Single Base Substitution 0 INTRON Hetero FN3945-S Chr2 3829599 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3945-S Chr2 19619359 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3945-S Chr3 8959433 C-A 0 0 Single Base Substitution 0 INTRON Hetero FN3945-S Chr3 20578400 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN3945-S Chr3 25697586 T-C 0 0 Single Base Substitution 0 INTRON Homo FN3945-S Chr4 7616581 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3945-S Chr4 28463280 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN3945-S Chr5 3336414 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3945-S Chr5 9200655 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3945-S Chr5 15979515 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3945-S Chr6 13831995 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3945-S Chr6 20818709 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3945-S Chr6 23538566 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3945-S Chr7 4818540 T-G 0 0 Single Base Substitution 0 UTR_3_PRIME Homo FN3945-S Chr7 6323502 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN3945-S Chr7 26718303 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3945-S Chr8 18436156 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3945-S Chr9 14080195 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3945-S Chr9 14829247 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3945-S Chr10 3839501 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake10g029100 CHS8_BROFI Chalcone synthase 8 OS=Bromheadia finlaysoniana GN=CHS8 PE=2 SV=Length=39 FN3945-S Chr10 13150860 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3945-S Chr10 22201543 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3945-S Chr11 17532526 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3945-S Chr11 24259908 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3945-S Chr11 26136644 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero