FN3956-S Chr1 36126027 36126042 0 0 Deletion 15 INTERGENIC Hetero FN3956-S Chr3 10033013 10033014 0 0 Deletion 1 SPLICE_SITE_DONOR Homo OsKitaake03g137300 PITP1_DICDI Phosphatidylinositol transfer protein 1 OS=Dictyostelium discoideum GN=pitA PE=1 SV=Leng FN3956-S Chr4 24277893 24277897 0 0 Deletion 4 INTERGENIC Homo FN3956-S Chr4 31549804 31549809 0 0 Deletion 5 FRAME_SHIFT Homo OsKitaake04g248400 TRNK1_HUMAN TPR and ankyrin repeat-containing protein 1 OS=Homo sapiens GN=TRANK1 PE=2 SV=Length=292 FN3956-S Chr6 10704896 10704903 0 0 Deletion 7 UTR_5_PRIME Hetero FN3956-S Chr7 17083704 17083729 0 0 Deletion 25 INTRON Homo FN3956-S Chr8 13713489 13713491 0 0 Deletion 2 INTERGENIC Hetero FN3956-S Chr9 20578473 20578474 0 0 Deletion 1 INTRON Hetero FN3956-S Chr9 21510908 21510920 0 0 Deletion 12 INTERGENIC Homo FN3956-S Chr10 3224287 3224289 0 0 Deletion 2 INTERGENIC Homo FN3956-S Chr2 31694539 31694539 0 0 Insertion 4 INTERGENIC Hetero FN3956-S Chr6 6847641 6847641 0 0 Insertion 2 INTERGENIC Hetero FN3956-S Chr3 9084393 9084393 0 0 Insertion 4 Hetero 0 FN3956-S Chr4 18297099 18297099 0 0 Insertion 1 Hetero 0 FN3956-S Chr7 11992111 11992111 0 0 Insertion 1 Hetero 0 FN3956-S Chr9 13489597 Chr2 19393681 0 Translocation 0 Hetero OsKitaake09g089866 Q6H485_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=B1040D06.37 PE=4 SV=Length=1 FN3956-S Chr9 13489604 Chr2 19386230 0 Translocation 0 Hetero OsKitaake09g089866 Q6H485_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=B1040D06.37 PE=4 SV=Length=1 FN3956-S Chr4 3810839 Chr3 10408508 0 Translocation 0 Hetero OsKitaake03g142300 IMB1_ARATH Importin subunit beta-1 OS=Arabidopsis thaliana GN=KPNB1 PE=1 SV=Length=87 FN3956-S Chr4 14394290 Chr1 26784385 0 Translocation 0 Hetero FN3956-S Chr5 10542490 Chr1 19377970 0 Translocation 0 Hetero FN3956-S Chr1 41753108 41820299 0 0 Inversion 0 Hetero OsKitaake01g456500 AK1_ARATH Aspartokinase 1, chloroplastic OS=Arabidopsis thaliana GN=AK1 PE=1 SV=Length=56 FN3956-S Chr1 41753117 41820301 0 0 Inversion 0 Hetero OsKitaake01g456500 AK1_ARATH Aspartokinase 1, chloroplastic OS=Arabidopsis thaliana GN=AK1 PE=1 SV=Length=56 FN3956-S Chr3 23320470 23939283 0 0 Inversion 0 Hetero OsKitaake03g250900 UGDH2_ORYSJ UDP-glucose 6-dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=UGD2 PE=2 SV=Length=48 FN3956-S Chr3 27368896 27380240 0 0 Inversion 0 Hetero OsKitaake03g282300 IRT1_ORYSJ Fe(2+) transport protein 1 OS=Oryza sativa subsp. japonica GN=IRT1 PE=2 SV=Length=37 FN3956-S Chr1 41753108 41820299 0 0 Inversion 0 Hetero OsKitaake01g457400 LCB2D_ORYSJ Long chain base biosynthesis protein 2d OS=Oryza sativa subsp. japonica GN=Os01g0928800 FN3956-S Chr1 41753117 41820301 0 0 Inversion 0 Hetero OsKitaake01g457400 LCB2D_ORYSJ Long chain base biosynthesis protein 2d OS=Oryza sativa subsp. japonica GN=Os01g0928800 FN3956-S Chr3 22518753 23320331 0 0 Inversion 0 Hetero OsKitaake03g250900 UGDH2_ORYSJ UDP-glucose 6-dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=UGD2 PE=2 SV=Length=48 FN3956-S Chr3 27357001 27368000 0 0 Deletion 10999 OsKitaake03g282100 IRT2_ORYSJ Fe(2+) transport protein 2 OS=Oryza sativa subsp. japonica GN=IRT2 PE=2 SV=Length=37 FN3956-S Chr3 27357001 27368000 0 0 Deletion 10999 OsKitaake03g282200 RPD1_ARATH Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=Length=40 FN3956-S Chr3 27357001 27368000 0 0 Deletion 10999 OsKitaake03g282300 IRT1_ORYSJ Fe(2+) transport protein 1 OS=Oryza sativa subsp. japonica GN=IRT1 PE=2 SV=Length=37 FN3956-S Chr3 27357001 27368000 0 0 Deletion 10999 OsKitaake03g282200 RPD1_ARATH Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=Length=40 FN3956-S Chr3 27357001 27368000 0 0 Deletion 10999 OsKitaake03g282300 IRT1_ORYSJ Fe(2+) transport protein 1 OS=Oryza sativa subsp. japonica GN=IRT1 PE=2 SV=Length=37 FN3956-S Chr1 25165380 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3956-S Chr2 16975270 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3956-S Chr4 6537625 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN3956-S Chr4 18381982 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3956-S Chr4 25209253 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME Homo FN3956-S Chr5 4754382 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3956-S Chr5 19526443 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3956-S Chr5 22624562 T-A 0 0 Single Base Substitution 0 START_GAINED Homo FN3956-S Chr6 9809215 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3956-S Chr6 12769589 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3956-S Chr6 15527732 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3956-S Chr6 30940008 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN3956-S Chr7 7816385 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Homo FN3956-S Chr7 17151501 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN3956-S Chr7 26700775 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3956-S Chr8 7395113 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3956-S Chr8 13644463 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3956-S Chr8 13644465 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3956-S Chr9 9215546 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo OsKitaake09g055000 A0A0E0QPT7_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=43 FN3956-S Chr10 16088959 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3956-S Chr10 16908528 G-A 0 0 Single Base Substitution 0 INTRON Hetero FN3956-S Chr11 3874354 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3956-S Chr11 4586570 G-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3956-S Chr11 8382889 C-T 0 0 Single Base Substitution 0 UTR_5_PRIME Hetero FN3956-S Chr11 9042024 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3956-S Chr12 14132462 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3956-S Chr12 16747457 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN3956-S Chr12 19284165 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo