FN4001-S Chr2 6113063 6113068 0 0 Deletion 5 FRAME_SHIFT Hetero OsKitaake02g083200 U73C1_ARATH UDP-glycosyltransferase 73C1 OS=Arabidopsis thaliana GN=UGT73C1 PE=2 SV=Length=49 FN4001-S Chr2 36793985 36793988 0 0 Deletion 3 CODON_DELETION Homo OsKitaake02g393100 B8AF65_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09536 PE=4 SV=Len FN4001-S Chr3 8868858 8868863 0 0 Deletion 5 UTR_3_PRIME Homo FN4001-S Chr3 35817273 35817274 0 0 Deletion 1 FRAME_SHIFT Homo OsKitaake03g394300 P2C35_ORYSJ Protein phosphatase 2C 35 OS=Oryza sativa subsp. japonica GN=XB15 PE=1 SV=Length=63 FN4001-S Chr4 21202180 21202183 0 0 Deletion 3 UTR_5_PRIME Hetero FN4001-S Chr5 20133037 20133039 0 0 Deletion 2 INTERGENIC Hetero FN4001-S Chr9 1393554 1393555 0 0 Deletion 1 INTERGENIC Hetero FN4001-S Chr12 1044950 1044952 0 0 Deletion 2 INTERGENIC Hetero FN4001-S Chr4 1825659 1825659 0 0 Insertion 4 INTERGENIC Hetero FN4001-S Chr8 4609436 4609436 0 0 Insertion 2 INTRON Homo FN4001-S Chr4 8384258 8384258 0 0 Insertion 1 Hetero 0 FN4001-S Chr3 11175714 11204775 0 0 Inversion 0 Hetero OsKitaake03g153500 PP216_ARATH Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thal FN4001-S Chr3 11175719 11204821 0 0 Inversion 0 Hetero OsKitaake03g153500 PP216_ARATH Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thal FN4001-S Chr4 20190171 20927939 0 0 Inversion 0 Hetero OsKitaake04g106900 ILVB2_ORYSJ Probable acetolactate synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=ALS2 FN4001-S Chr4 20190174 20927965 0 0 Inversion 0 Hetero OsKitaake04g106900 ILVB2_ORYSJ Probable acetolactate synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=ALS2 FN4001-S Chr3 11175714 11204775 0 0 Inversion 0 Hetero OsKitaake03g153900 A0A0E0NU50_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=80 FN4001-S Chr3 11175719 11204821 0 0 Inversion 0 Hetero OsKitaake03g153900 A0A0E0NU50_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=80 FN4001-S Chr4 20190171 20927939 0 0 Inversion 0 Hetero OsKitaake04g114401 Hypothetical protein FN4001-S Chr4 20190174 20927965 0 0 Inversion 0 Hetero OsKitaake04g114401 Hypothetical protein FN4001-S Chr2 14967001 15003000 0 0 Deletion 35999 OsKitaake02g157600 Hypothetical protein FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g189100 GT21_ORYSJ Probable glucuronosyltransferase Os02g0520750 OS=Oryza sativa subsp. japonica GN=Os02g052 FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g189200 UCRI_MAIZE Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Zea mays PE=2 SV=Length=27 FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g189300 EF114_ARATH Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=1 S FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g189400 BON1_ARATH Protein BONZAI 1 OS=Arabidopsis thaliana GN=BON1 PE=1 SV=Length=57 FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g189500 OTUBL_ARATH Ubiquitin thioesterase otubain-like OS=Arabidopsis thaliana GN=At1g28120 PE=2 SV=Length= FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g189600 OTUBL_ARATH Ubiquitin thioesterase otubain-like OS=Arabidopsis thaliana GN=At1g28120 PE=2 SV=Length= FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g189700 ACO13_PONAB Acyl-coenzyme A thioesterase 13 OS=Pongo abelii GN=ACOT13 PE=2 SV=Length=14 FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g189900 OTUBL_ARATH Ubiquitin thioesterase otubain-like OS=Arabidopsis thaliana GN=At1g28120 PE=2 SV=Length= FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g190000 OTUBL_CAEBR Ubiquitin thioesterase otubain-like OS=Caenorhabditis briggsae GN=otub-1 PE=3 SV=Length= FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g190050 Hypothetical protein FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g190100 A0A0P0VJN7_ORYSJ Os02g0522800 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os02g0522800 PE= FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g190200 PUX16_ARATH Plant UBX domain-containing protein 16 OS=Arabidopsis thaliana GN=PUX16 PE=2 SV=Length=4 FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g190300 A0A0P0VJS0_ORYSJ Os02g0523100 protein OS=Oryza sativa subsp. japonica GN=Os02g0523100 PE=4 SV=Length FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g190500 GCP5_MOUSE Gamma-tubulin complex component 5 OS=Mus musculus GN=Tubgcp5 PE=2 SV=Length=102 FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g190600 TSN1_ARATH Ribonuclease TUDOR 1 OS=Arabidopsis thaliana GN=TSN1 PE=1 SV=Length=99 FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g190650 Hypothetical protein FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g190700 IPK2_ORYSJ Inositol polyphosphate multikinase IPK2 OS=Oryza sativa subsp. japonica GN=IPK2 PE=2 SV=L FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g190800 B9F0B3_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_06958 PE=4 SV=Length=14 FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g190850 RK19_SPIOL 50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea GN=RPL19 PE=1 SV=Length=23 FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g190900 BRG2_ARATH Probable BOI-related E3 ubiquitin-protein ligase 2 OS=Arabidopsis thaliana GN=BRG2 PE=1 S FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g191000 LWD1_ARATH WD repeat-containing protein LWD1 OS=Arabidopsis thaliana GN=LWD1 PE=2 SV=Length=34 FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g191100 A0A0D3F5T9_9ORYZ Uncharacterized protein OS=Oryza barthii PE=4 SV=Length=10 FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g191200 MOC32_MAIZE Adenylyltransferase and sulfurtransferase MOCS3-2 OS=Zea mays GN=MOCS3-2 PE=2 SV=Length= FN4001-S Chr2 19322001 19576000 0 0 Deletion 253999 OsKitaake02g191300 A0A0E0NFQ4_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=11 FN4001-S Chr6 24936001 24943000 0 0 Deletion 6999 OsKitaake06g221700 Q67VV9_ORYSJ Os06g0627400 protein OS=Oryza sativa subsp. japonica GN=Os06g0627400 PE=4 SV=Length=21 FN4001-S Chr11 5208001 5340000 0 0 Deletion 131999 OsKitaake11g065500 FDL31_ARATH F-box/FBD/LRR-repeat protein At5g22660 OS=Arabidopsis thaliana GN=At5g22660 PE=2 SV=Leng FN4001-S Chr11 5208001 5340000 0 0 Deletion 131999 OsKitaake11g065600 FB250_ARATH F-box protein At5g03100 OS=Arabidopsis thaliana GN=At5g03100 PE=2 SV=Length=30 FN4001-S Chr11 5208001 5340000 0 0 Deletion 131999 OsKitaake11g065700 FBL72_ARATH Putative F-box/LRR-repeat protein At4g13960 OS=Arabidopsis thaliana GN=At4g13960 PE=4 SV FN4001-S Chr11 5208001 5340000 0 0 Deletion 131999 OsKitaake11g065800 FBD40_ARATH FBD-associated F-box protein At4g10400 OS=Arabidopsis thaliana GN=At4g10400 PE=2 SV=Leng FN4001-S Chr11 5208001 5340000 0 0 Deletion 131999 OsKitaake11g065900 FDL31_ARATH F-box/FBD/LRR-repeat protein At5g22660 OS=Arabidopsis thaliana GN=At5g22660 PE=2 SV=Leng FN4001-S Chr11 5208001 5340000 0 0 Deletion 131999 OsKitaake11g066000 FBL63_ARATH F-box/LRR-repeat protein At3g59190 OS=Arabidopsis thaliana GN=At3g59190 PE=2 SV=Length=3 FN4001-S Chr11 5208001 5340000 0 0 Deletion 131999 OsKitaake11g066100 FBL63_ARATH F-box/LRR-repeat protein At3g59190 OS=Arabidopsis thaliana GN=At3g59190 PE=2 SV=Length=3 FN4001-S Chr11 5208001 5340000 0 0 Deletion 131999 OsKitaake11g066200 FBL86_ARATH F-box/LRR-repeat protein At5g38396 OS=Arabidopsis thaliana GN=At5g38396 PE=4 SV=Length=4 FN4001-S Chr11 5208001 5340000 0 0 Deletion 131999 OsKitaake11g066300 U71K2_PYRCO UDP-glycosyltransferase 71K2 OS=Pyrus communis GN=UGT71K2 PE=1 SV=Length=48 FN4001-S Chr11 5208001 5340000 0 0 Deletion 131999 OsKitaake11g066400 Q53LF9_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os11g09710 PE=4 SV=Length=37 FN4001-S Chr11 5208001 5340000 0 0 Deletion 131999 OsKitaake11g066433 C7J8S5_ORYSJ Os11g0203000 protein OS=Oryza sativa subsp. japonica GN=Os11g0203000 PE=4 SV=Length=18 FN4001-S Chr11 5208001 5340000 0 0 Deletion 131999 OsKitaake11g066466 Hypothetical protein FN4001-S Chr11 5208001 5340000 0 0 Deletion 131999 OsKitaake11g066499 A0A0P0XZS8_ORYSJ Os11g0204200 protein OS=Oryza sativa subsp. japonica GN=Os11g0204200 PE=4 SV=Length FN4001-S Chr11 5208001 5340000 0 0 Deletion 131999 OsKitaake11g066466 Hypothetical protein FN4001-S Chr11 5208001 5340000 0 0 Deletion 131999 OsKitaake11g066499 A0A0P0XZS8_ORYSJ Os11g0204200 protein OS=Oryza sativa subsp. japonica GN=Os11g0204200 PE=4 SV=Length FN4001-S Chr1 30610402 G-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4001-S Chr2 1234468 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4001-S Chr2 31155545 T-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN4001-S Chr3 4625739 A-T 0 0 Single Base Substitution 0 INTRON Homo FN4001-S Chr3 10326120 A-T 0 0 Single Base Substitution 0 INTRON Homo FN4001-S Chr3 11143596 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4001-S Chr3 12289852 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4001-S Chr3 24077292 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4001-S Chr3 28112881 A-T 0 0 Single Base Substitution 0 INTRON Homo FN4001-S Chr4 5423146 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4001-S Chr4 5510518 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4001-S Chr4 14933525 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4001-S Chr4 20728878 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN4001-S Chr4 25949314 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN4001-S Chr5 14498101 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME Homo FN4001-S Chr6 109379 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4001-S Chr6 3680468 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN4001-S Chr7 9885735 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4001-S Chr7 12312222 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4001-S Chr7 14394477 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4001-S Chr8 18950037 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN4001-S Chr9 12877781 A-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN4001-S Chr10 16199860 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4001-S Chr11 4169858 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN4001-S Chr11 7414037 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4001-S Chr11 8152849 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4001-S Chr11 12297280 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4001-S Chr11 27201613 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4001-S Chr11 28024715 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4001-S Chr12 14920447 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4001-S Chr12 17051101 T-G 0 0 Single Base Substitution 0 INTERGENIC Hetero