FN4078-S Chr4 29443595 29443597 0 0 Deletion 2 INTERGENIC Homo FN4078-S Chr5 21699485 21699487 0 0 Deletion 2 INTERGENIC Hetero FN4078-S Chr8 97496 97500 0 0 Deletion 4 UTR_3_PRIME Hetero FN4078-S Chr12 1623700 1623708 0 0 Deletion 8 UTR_3_PRIME Hetero FN4078-S Chr12 6415881 6415882 0 0 Deletion 1 INTERGENIC Homo FN4078-S Chr3 31956570 31956570 0 0 Insertion 2 INTERGENIC Hetero FN4078-S Chr5 7864657 7864657 0 0 Insertion 2 INTERGENIC Homo FN4078-S Chr1 37738039 37738041 0 0 Deletion 2 Hetero 0 FN4078-S Chr5 10944141 10944141 0 0 Insertion 1 Hetero 0 FN4078-S Chr3 32429886 32666635 0 0 Inversion 0 Hetero OsKitaake03g343350 Q75J13_ORYSJ Putative uncharacterized protein OSJNBb0081K01.14 OS=Oryza sativa subsp. japonica GN=OS FN4078-S Chr10 18182182 18422855 0 0 Inversion 0 Hetero OsKitaake10g128500 Q7XDI4_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os10g33240 PE=4 SV=Length=98 FN4078-S Chr1 36911037 37081927 0 0 Inversion 0 Homo OsKitaake01g395200 MB3R2_ORYSJ Transcription factor MYB3R-2 OS=Oryza sativa subsp. japonica GN=MYB3R-2 PE=2 SV=Length=5 FN4078-S Chr1 36911043 37081928 0 0 Inversion 0 Homo OsKitaake01g395200 MB3R2_ORYSJ Transcription factor MYB3R-2 OS=Oryza sativa subsp. japonica GN=MYB3R-2 PE=2 SV=Length=5 FN4078-S Chr3 32411603 32666648 0 0 Inversion 0 Hetero OsKitaake03g345800 BUB33_ARATH Mitotic checkpoint protein BUB3.3 OS=Arabidopsis thaliana GN=BUB3.3 PE=2 SV=Length=31 FN4078-S Chr3 32429886 32666635 0 0 Inversion 0 Hetero OsKitaake03g345800 BUB33_ARATH Mitotic checkpoint protein BUB3.3 OS=Arabidopsis thaliana GN=BUB3.3 PE=2 SV=Length=31 FN4078-S Chr5 28601121 29515637 0 0 Inversion 0 Hetero OsKitaake05g280400 XLG1_ARATH Extra-large guanine nucleotide-binding protein 1 OS=Arabidopsis thaliana GN=XLG1 PE=1 SV= FN4078-S Chr5 28601126 29515654 0 0 Inversion 0 Hetero OsKitaake05g280400 XLG1_ARATH Extra-large guanine nucleotide-binding protein 1 OS=Arabidopsis thaliana GN=XLG1 PE=1 SV= FN4078-S Chr10 18182182 18422855 0 0 Inversion 0 Hetero OsKitaake10g130500 FAO1_LOTJA Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus GN=FAO1 PE=1 SV=Length=74 FN4078-S Chr2 2344952 2641704 0 0 Inversion 0 Hetero FN4078-S Chr2 2344956 2641706 0 0 Inversion 0 Hetero FN4078-S Chr10 18087991 18423672 0 0 Inversion 0 Hetero FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g355100 KNOS8_ORYSJ Homeobox protein knotted-1-like 8 OS=Oryza sativa subsp. japonica GN=OSH43 PE=2 SV=Lengt FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g355200 KNOS9_ORYSJ Homeobox protein knotted-1-like 9 OS=Oryza sativa subsp. japonica GN=Os03g0772100 PE=3 S FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g355300 LRK41_ARATH L-type lectin-domain containing receptor kinase IV.1 OS=Arabidopsis thaliana GN=LECRK41 FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g355400 LRK59_ARATH L-type lectin-domain containing receptor kinase V.9 OS=Arabidopsis thaliana GN=LECRK59 P FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g355500 COX6A_ARATH Cytochrome c oxidase subunit 6a, mitochondrial OS=Arabidopsis thaliana GN=COX6A PE=3 SV= FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g355600 A0A0E0P1W2_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=24 FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g355650 Hypothetical protein FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g355700 Q7XZV9_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=Os03g0773000 PE=4 SV=Length=44 FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g355800 Hypothetical protein FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g355900 TKI1_ARATH TSL-kinase interacting protein 1 OS=Arabidopsis thaliana GN=TKI1 PE=1 SV=Length=74 FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g356000 RS29_WHEAT 40S ribosomal protein S29 OS=Triticum aestivum GN=RPS29 PE=1 SV=Length=5 FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g356100 Y2165_ARATH Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thal FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g356200 KN8B_ORYSJ Kinesin-like protein KIN-8B OS=Oryza sativa subsp. japonica GN=KIN8B PE=2 SV=Length=73 FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g356300 BAME1_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis th FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g356400 MDHG_ORYSJ Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica GN=Os12g0632700 PE=1 SV FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g356500 NDUS8_SOLTU NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Solanum tuberosu FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g356600 5NTC_MOUSE Cytosolic purine 5'-nucleotidase OS=Mus musculus GN=Nt5c2 PE=1 SV=Length=56 FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g356700 Q7XZV7_ORYSJ Putative uncharacterized protein OSJNBb0094O03.20 OS=Oryza sativa subsp. japonica GN=OS FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g356800 Q10E08_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g56330 PE=4 SV=Length=9 FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g356900 A0A0E0P1X8_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=32 FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g357000 B9F5Y6_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_12768 PE=4 SV=Length=15 FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g357100 CDN2D_HUMAN Cyclin-dependent kinase 4 inhibitor D OS=Homo sapiens GN=CDKN2D PE=1 SV=Length=16 FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g357200 Y3787_MYCA9 Putative S-adenosyl-L-methionine-dependent methyltransferase MAB_3787 OS=Mycobacterium a FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g357300 PMTS_ARATH Probable methyltransferase PMT28 OS=Arabidopsis thaliana GN=At1g19430 PE=2 SV=Length=72 FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g357400 TYW1_ORYSJ S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase OS=Oryza sativa subsp. FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g357500 PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana GN=PCMP-H4 FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g357600 AEL1_ARATH Protein AE7-like 1 OS=Arabidopsis thaliana GN=AEL1 PE=3 SV=Length=15 FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g357700 Hypothetical protein FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g357800 Y1015_ARATH Uncharacterized protein At1g01500 OS=Arabidopsis thaliana GN=At1g01500 PE=2 SV=Length=32 FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g357900 Q8H8M9_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g56430 PE=4 SV=Length=94 FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g358000 A2XMG3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13716 PE=4 SV=Len FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g358100 A0A0E0P1Y8_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=46 FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g358200 G6PIA_ORYSJ Glucose-6-phosphate isomerase, cytosolic A OS=Oryza sativa subsp. japonica GN=Os03g07760 FN4078-S Chr3 33240001 33468000 0 0 Deletion 227999 OsKitaake03g358300 PERK4_ARATH Proline-rich receptor-like protein kinase PERK4 OS=Arabidopsis thaliana GN=PERK4 PE=1 SV FN4078-S Chr8 21872001 21976000 0 0 Deletion 103999 OsKitaake08g165300 ZHD10_ORYSJ Zinc-finger homeodomain protein 10 OS=Oryza sativa subsp. japonica GN=ZHD10 PE=3 SV=Leng FN4078-S Chr8 21872001 21976000 0 0 Deletion 103999 OsKitaake08g165400 ARAD1_ARATH Probable arabinosyltransferase ARAD1 OS=Arabidopsis thaliana GN=ARAD1 PE=1 SV=Length=44 FN4078-S Chr8 21872001 21976000 0 0 Deletion 103999 OsKitaake08g165500 CLE45_ARATH CLAVATA3/ESR (CLE)-related protein 45 OS=Arabidopsis thaliana GN=CLE45 PE=2 SV=Length=12 FN4078-S Chr8 21872001 21976000 0 0 Deletion 103999 OsKitaake08g165600 PFKA5_ARATH ATP-dependent 6-phosphofructokinase 5, chloroplastic OS=Arabidopsis thaliana GN=PFK5 PE= FN4078-S Chr8 21872001 21976000 0 0 Deletion 103999 OsKitaake08g165700 Hypothetical protein FN4078-S Chr8 21872001 21976000 0 0 Deletion 103999 OsKitaake08g165800 EDR2L_ARATH Protein ENHANCED DISEASE RESISTANCE 2-like OS=Arabidopsis thaliana GN=EDR2L PE=2 SV=Leng FN4078-S Chr8 21872001 21976000 0 0 Deletion 103999 OsKitaake08g165900 DCNL4_HUMAN DCN1-like protein 4 OS=Homo sapiens GN=DCUN1D4 PE=1 SV=Length=29 FN4078-S Chr8 21872001 21976000 0 0 Deletion 103999 OsKitaake08g166000 A0A0D3H0P4_9ORYZ Uncharacterized protein OS=Oryza barthii PE=4 SV=Length=15 FN4078-S Chr8 21872001 21976000 0 0 Deletion 103999 OsKitaake08g166100 Q6Z9I5_ORYSJ Os08g0439600 protein OS=Oryza sativa subsp. japonica GN=Os08g0439600 PE=4 SV=Length=40 FN4078-S Chr8 21872001 21976000 0 0 Deletion 103999 OsKitaake08g166200 YB95_ARATH Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana GN=At2g39795 PE= FN4078-S Chr8 21872001 21976000 0 0 Deletion 103999 OsKitaake08g166300 GOS11_ARATH Golgi SNAP receptor complex member 1-1 OS=Arabidopsis thaliana GN=GOS11 PE=2 SV=Length=2 FN4078-S Chr8 21872001 21976000 0 0 Deletion 103999 OsKitaake08g166400 TIL_ARATH Temperature-induced lipocalin-1 OS=Arabidopsis thaliana GN=TIL PE=1 SV=Length=18 FN4078-S Chr8 21872001 21976000 0 0 Deletion 103999 OsKitaake08g166500 PARNL_ARATH Poly(A)-specific ribonuclease PARN-like OS=Arabidopsis thaliana GN=At3g25430 PE=2 SV=Len FN4078-S Chr10 17096001 17233000 0 0 Deletion 136999 OsKitaake10g116803 Q337Q4_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=LOC_Os10g31180 PE=4 SV=Lengt FN4078-S Chr10 17096001 17233000 0 0 Deletion 136999 OsKitaake10g117200 Y3720_ARATH UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=2 SV=Length=47 FN4078-S Chr10 17096001 17233000 0 0 Deletion 136999 OsKitaake10g117300 Q7XDV9_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=Os10g0450100 PE=4 SV=Length=79 FN4078-S Chr10 17096001 17233000 0 0 Deletion 136999 OsKitaake10g117400 Q7XDV5_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os10g31290 PE=2 SV=Length=81 FN4078-S Chr10 17096001 17233000 0 0 Deletion 136999 OsKitaake10g117600 A0A0E0QZU0_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=22 FN4078-S Chr10 17096001 17233000 0 0 Deletion 136999 OsKitaake10g117700 Q7XDU8_ORYSJ GRF zinc finger family protein, expressed OS=Oryza sativa subsp. japonica GN=Os10g04514 FN4078-S Chr10 17096001 17233000 0 0 Deletion 136999 OsKitaake10g117800 Q7XDU7_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=LOC_Os10g31370 PE=4 SV=Lengt FN4078-S Chr2 28255013 G-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN4078-S Chr3 7306189 C-T 0 0 Single Base Substitution 0 INTRON Homo FN4078-S Chr3 9426606 A-G 0 0 Single Base Substitution 0 INTRON Hetero FN4078-S Chr3 14208330 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN4078-S Chr3 34453248 G-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4078-S Chr3 35430222 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4078-S Chr4 199456 A-T 0 0 Single Base Substitution 0 INTRON Hetero FN4078-S Chr4 730331 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4078-S Chr4 6537913 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN4078-S Chr4 6742857 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN4078-S Chr4 13649428 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN4078-S Chr4 21147045 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4078-S Chr4 22773056 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN4078-S Chr4 22791796 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN4078-S Chr4 28726237 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN4078-S Chr4 31722667 A-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4078-S Chr4 36388099 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4078-S Chr5 5667425 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN4078-S Chr5 17107007 T-G 0 0 Single Base Substitution 0 UTR_3_PRIME Homo FN4078-S Chr6 2716301 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN4078-S Chr6 18436592 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4078-S Chr7 2909345 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4078-S Chr7 26142385 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN4078-S Chr8 8581098 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN4078-S Chr8 12073177 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4078-S Chr10 6860379 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4078-S Chr10 19129185 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4078-S Chr10 21400855 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN4078-S Chr11 4115623 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake11g056000 A0A0E0R501_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=26 FN4078-S Chr11 5626464 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4078-S Chr11 8605005 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN4078-S Chr11 16475468 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4078-S Chr11 17536959 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4078-S Chr11 19587251 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake11g152600 FBL90_ARATH Putative F-box/LRR-repeat protein At5g54820 OS=Arabidopsis thaliana GN=At5g54820 PE=4 SV FN4078-S Chr11 21095637 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo