FN4344-S Chr1 10494395 10494402 0 0 Deletion 7 INTERGENIC Hetero FN4344-S Chr2 10409936 10409953 0 0 Deletion 17 INTERGENIC Homo FN4344-S Chr2 11682007 11682009 0 0 Deletion 2 INTERGENIC Hetero FN4344-S Chr2 16508397 16508403 0 0 Deletion 6 INTERGENIC Homo FN4344-S Chr4 30884177 30884179 0 0 Deletion 2 INTERGENIC Hetero FN4344-S Chr6 4699409 4699414 0 0 Deletion 5 INTERGENIC Hetero FN4344-S Chr8 1677314 1677315 0 0 Deletion 1 INTERGENIC Hetero FN4344-S Chr10 17160431 17160437 0 0 Deletion 6 INTERGENIC Hetero FN4344-S Chr10 19829407 19829408 0 0 Deletion 1 FRAME_SHIFT Homo OsKitaake10g147800 RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=Length=79 FN4344-S Chr11 3911969 3911972 0 0 Deletion 3 INTERGENIC Homo FN4344-S Chr11 20536962 20536963 0 0 Deletion 1 INTRON Hetero FN4344-S Chr7 26091602 26091602 0 0 Insertion 2 INTERGENIC Hetero FN4344-S Chr10 10005818 10005818 0 0 Insertion 2 INTERGENIC Homo FN4344-S Chr5 28150236 28430831 0 0 Inversion 0 Homo OsKitaake05g260400 GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g055 FN4344-S Chr5 28150241 28430834 0 0 Inversion 0 Homo OsKitaake05g260400 GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g055 FN4344-S Chr1 10568186 11249466 0 0 Inversion 0 Hetero FN4344-S Chr1 11247001 11458000 0 0 Deletion 210999 OsKitaake01g138100 PPR4_ARATH Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidopsis thali FN4344-S Chr1 11247001 11458000 0 0 Deletion 210999 OsKitaake01g138200 PPR4_ARATH Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidopsis thali FN4344-S Chr1 11247001 11458000 0 0 Deletion 210999 OsKitaake01g138300 Y3720_ARATH UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=2 SV=Length=47 FN4344-S Chr1 11247001 11458000 0 0 Deletion 210999 OsKitaake01g138333 A0A0P0V1W6_ORYSJ Os01g0302000 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os01g0302000 PE= FN4344-S Chr1 11247001 11458000 0 0 Deletion 210999 OsKitaake01g138366 Q657I4_ORYSJ Putative uncharacterized protein B1146F03.3 OS=Oryza sativa subsp. japonica GN=B1146F03 FN4344-S Chr1 11247001 11458000 0 0 Deletion 210999 OsKitaake01g138400 B7ER10_ORYSJ Os01g0302100 protein OS=Oryza sativa subsp. japonica GN=Os01g0302100 PE=2 SV=Length=15 FN4344-S Chr1 11247001 11458000 0 0 Deletion 210999 OsKitaake01g138500 A0A0D9Y7A0_9ORYZ Uncharacterized protein OS=Oryza glumipatula PE=4 SV=Length=20 FN4344-S Chr1 11247001 11458000 0 0 Deletion 210999 OsKitaake01g138600 B8A6Q2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01552 PE=4 SV=Len FN4344-S Chr1 11247001 11458000 0 0 Deletion 210999 OsKitaake01g138700 KNOS1_ORYSJ Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica GN=OSH6 PE=2 SV=Length FN4344-S Chr1 11247001 11458000 0 0 Deletion 210999 OsKitaake01g138800 Hypothetical protein FN4344-S Chr1 11247001 11458000 0 0 Deletion 210999 OsKitaake01g138900 CP122_ARATH Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana GN=CP12-2 PE=1 SV=Len FN4344-S Chr1 11247001 11458000 0 0 Deletion 210999 OsKitaake01g139000 CHIE_BETVU Acidic endochitinase SE2 OS=Beta vulgaris GN=SE2 PE=1 SV=Length=29 FN4344-S Chr1 11247001 11458000 0 0 Deletion 210999 OsKitaake01g139100 F91A1_MOUSE Protein FAM91A1 OS=Mus musculus GN=Fam91a1 PE=1 SV=Length=83 FN4344-S Chr1 11247001 11458000 0 0 Deletion 210999 OsKitaake01g139200 OP162_ARATH Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana GN=OEP162 PE=2 S FN4344-S Chr1 11247001 11458000 0 0 Deletion 210999 OsKitaake01g139300 MARH9_MOUSE E3 ubiquitin-protein ligase MARCH9 OS=Mus musculus GN=March9 PE=2 SV=Length=34 FN4344-S Chr1 11247001 11458000 0 0 Deletion 210999 OsKitaake01g139400 USPAL_ARATH Universal stress protein A-like protein OS=Arabidopsis thaliana GN=At3g01520 PE=1 SV=Len FN4344-S Chr1 11247001 11458000 0 0 Deletion 210999 OsKitaake01g139500 RL291_ARATH 60S ribosomal protein L29-1 OS=Arabidopsis thaliana GN=RPL29A PE=1 SV=Length=6 FN4344-S Chr1 11247001 11458000 0 0 Deletion 210999 OsKitaake01g139600 CCC2_ORYSJ Cation-chloride cotransporter 2 OS=Oryza sativa subsp. japonica GN=CCC2 PE=2 SV=Length=99 FN4344-S Chr1 11247001 11458000 0 0 Deletion 210999 OsKitaake01g139700 A0A0E0MV88_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=60 FN4344-S Chr1 11247001 11458000 0 0 Deletion 210999 OsKitaake01g139800 A0A0D9Y7C3_9ORYZ Uncharacterized protein OS=Oryza glumipatula PE=4 SV=Length=16 FN4344-S Chr2 16338001 16441000 0 0 Deletion 102999 OsKitaake02g167800 SAD2_ARATH Importin beta-like SAD2 OS=Arabidopsis thaliana GN=SAD2 PE=1 SV=Length=104 FN4344-S Chr2 16338001 16441000 0 0 Deletion 102999 OsKitaake02g167900 Hypothetical protein FN4344-S Chr2 16338001 16441000 0 0 Deletion 102999 OsKitaake02g167950 Hypothetical protein FN4344-S Chr2 16338001 16441000 0 0 Deletion 102999 OsKitaake02g168000 MACP1_ARATH MACPF domain-containing protein At1g14780 OS=Arabidopsis thaliana GN=At1g14780 PE=2 SV=L FN4344-S Chr2 16338001 16441000 0 0 Deletion 102999 OsKitaake02g168100 BASS3_ORYSJ Probable sodium/metabolite cotransporter BASS3, chloroplastic OS=Oryza sativa subsp. jap FN4344-S Chr2 16338001 16441000 0 0 Deletion 102999 OsKitaake02g168200 RP8L2_ARATH Probable disease resistance RPP8-like protein 2 OS=Arabidopsis thaliana GN=RPP8L2 PE=3 S FN4344-S Chr2 16338001 16441000 0 0 Deletion 102999 OsKitaake02g168300 Hypothetical protein FN4344-S Chr1 3482723 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN4344-S Chr1 8270872 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4344-S Chr1 11065169 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake01g136000 A0A0E0MV34_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=42 FN4344-S Chr1 22507242 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4344-S Chr2 949382 C-T 0 0 Single Base Substitution 0 INTRON Homo FN4344-S Chr2 1177956 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake02g017600 PPR2_ARATH Pentatricopeptide repeat-containing protein At1g02060, chloroplastic OS=Arabidopsis thali FN4344-S Chr2 1342938 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN4344-S Chr2 14170129 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4344-S Chr2 23476888 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN4344-S Chr2 25673602 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN4344-S Chr3 497376 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN4344-S Chr3 713346 A-G 0 0 Single Base Substitution 0 INTRON Hetero FN4344-S Chr3 17163906 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN4344-S Chr4 29377912 T-G 0 0 Single Base Substitution 0 INTRON Hetero FN4344-S Chr4 29377913 A-T 0 0 Single Base Substitution 0 INTRON Hetero FN4344-S Chr4 29377914 G-A 0 0 Single Base Substitution 0 INTRON Hetero FN4344-S Chr4 33906658 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4344-S Chr4 34450551 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4344-S Chr5 2401775 T-C 0 0 Single Base Substitution 0 INTRON Hetero FN4344-S Chr5 16381093 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4344-S Chr5 19063584 G-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN4344-S Chr5 19768580 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4344-S Chr5 23013012 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4344-S Chr6 21897743 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4344-S Chr6 21897744 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4344-S Chr6 22103952 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4344-S Chr6 30235835 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN4344-S Chr7 20669797 G-A 0 0 Single Base Substitution 0 INTRON Homo FN4344-S Chr7 25176669 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4344-S Chr8 9102767 T-A 0 0 Single Base Substitution 0 INTRON Hetero FN4344-S Chr8 13995283 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4344-S Chr8 25371287 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN4344-S Chr8 28869143 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4344-S Chr9 1468302 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4344-S Chr9 12476447 T-A 0 0 Single Base Substitution 0 START_GAINED Hetero FN4344-S Chr9 16239602 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4344-S Chr10 4359044 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN4344-S Chr10 23680045 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4344-S Chr11 9295091 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4344-S Chr11 9838744 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4344-S Chr11 12890798 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4344-S Chr11 17181148 T-A 0 0 Single Base Substitution 0 INTRON Hetero FN4344-S Chr11 25623557 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake11g206600 Hypothetical protein FN4344-S Chr12 15545828 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN4344-S Chr12 17269775 C-T 0 0 Single Base Substitution 0 INTRON Hetero FN4344-S Chr12 25331630 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero