FN539-S Chr2 13960932 13960939 0 0 Deletion 7 INTRON Hetero FN539-S Chr2 31190351 31190353 0 0 Deletion 2 INTRON Homo FN539-S Chr4 3520572 3520594 0 0 Deletion 22 INTERGENIC Hetero FN539-S Chr5 22153143 22153151 0 0 Deletion 8 INTERGENIC Hetero FN539-S Chr6 18704828 18704829 0 0 Deletion 1 INTERGENIC Hetero FN539-S Chr9 4113332 4113340 0 0 Deletion 8 INTERGENIC Homo FN539-S Chr9 19270909 19270915 0 0 Deletion 6 INTRON Homo FN539-S Chr10 23656704 23656708 0 0 Deletion 4 INTERGENIC Hetero FN539-S Chr11 10055108 10055112 0 0 Deletion 4 INTERGENIC Hetero FN539-S Chr11 25143338 25143340 0 0 Deletion 2 INTERGENIC Homo FN539-S Chr12 19582289 19582291 0 0 Deletion 2 INTERGENIC Hetero FN539-S Chr10 5904684 5904684 0 0 Insertion 2 INTERGENIC Hetero FN539-S Chr10 16403060 16403060 0 0 Insertion 4 INTERGENIC Hetero FN539-S Chr5 30237084 30237437 0 0 Deletion 353 Hetero 0 FN539-S Chr7 6608187 6608189 0 0 Deletion 2 Hetero 0 FN539-S Chr2 13756014 13756014 0 0 Insertion 1 Hetero 0 FN539-S Chr12 72146 Chr8 27716659 0 Translocation 0 Hetero OsKitaake08g231000 BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137 PE=2 SV=Length=28 FN539-S Chr12 72152 Chr8 27716666 0 Translocation 0 Hetero OsKitaake08g231000 BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137 PE=2 SV=Length=28 FN539-S Chr12 5894292 Chr7 22241136 0 Translocation 0 Hetero OsKitaake07g187600 CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 FN539-S Chr7 916774 Chr2 1342895 0 Translocation 0 Hetero FN539-S Chr7 916931 Chr2 1342893 0 Translocation 0 Hetero FN539-S Chr12 5895146 Chr7 22290669 0 Translocation 0 Hetero FN539-S Chr12 26395253 Chr9 12960272 0 Translocation 0 Hetero FN539-S Chr12 26409832 Chr9 12960251 0 Translocation 0 Hetero FN539-S Chr2 15220327 15755917 0 0 Inversion 0 Homo OsKitaake02g163400 C7IYI3_ORYSJ Os02g0464900 protein OS=Oryza sativa subsp. japonica GN=Os02g0464900 PE=4 SV=Length=55 FN539-S Chr2 15220329 15755923 0 0 Inversion 0 Homo OsKitaake02g163400 C7IYI3_ORYSJ Os02g0464900 protein OS=Oryza sativa subsp. japonica GN=Os02g0464900 PE=4 SV=Length=55 FN539-S Chr7 22240001 22291000 0 0 Deletion 50999 OsKitaake07g187600 CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 FN539-S Chr7 22240001 22291000 0 0 Deletion 50999 OsKitaake07g187700 THF1_ORYSJ Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza sativa subsp. japonica GN=THF1 PE=2 FN539-S Chr7 22240001 22291000 0 0 Deletion 50999 OsKitaake07g187800 Hypothetical protein FN539-S Chr7 22240001 22291000 0 0 Deletion 50999 OsKitaake07g187900 VAP42_ARATH Vesicle-associated protein 4-2 OS=Arabidopsis thaliana GN=PVA42 PE=1 SV=Length=29 FN539-S Chr7 22240001 22291000 0 0 Deletion 50999 OsKitaake07g188000 Q6Z406_ORYSJ Putative uncharacterized protein P0567H04.19-1 OS=Oryza sativa subsp. japonica GN=P0567 FN539-S Chr7 22240001 22291000 0 0 Deletion 50999 OsKitaake07g188100 A0A0E0I2B0_ORYNI Uncharacterized protein OS=Oryza nivara PE=4 SV=Length=7 FN539-S Chr7 22240001 22291000 0 0 Deletion 50999 OsKitaake07g188150 Q6Z404_ORYSJ Putative uncharacterized protein P0567H04.21 OS=Oryza sativa subsp. japonica GN=P0567H0 FN539-S Chr7 22240001 22291000 0 0 Deletion 50999 OsKitaake07g188200 A0A0D3GSD3_9ORYZ Uncharacterized protein OS=Oryza barthii PE=4 SV=Length=27 FN539-S Chr7 22240001 22291000 0 0 Deletion 50999 OsKitaake07g188300 STC_RICCO Sugar carrier protein C OS=Ricinus communis GN=STC PE=2 SV=Length=52 FN539-S Chr2 1949092 T-C 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN539-S Chr2 12013762 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN539-S Chr2 16313236 T-G 0 0 Single Base Substitution 0 INTRON Hetero FN539-S Chr5 1289779 T-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN539-S Chr5 13796158 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN539-S Chr5 24081856 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN539-S Chr6 9390962 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN539-S Chr6 14032765 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN539-S Chr6 22654451 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN539-S Chr8 1877802 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN539-S Chr8 25601284 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN539-S Chr8 25601285 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN539-S Chr9 18340150 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN539-S Chr9 19616779 T-C 0 0 Single Base Substitution 0 UTR_3_PRIME Homo FN539-S Chr10 10641704 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN539-S Chr10 17783242 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN539-S Chr11 6601099 T-C 0 0 Single Base Substitution 0 INTRON Hetero FN539-S Chr11 21262408 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN539-S Chr11 22937346 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN539-S Chr11 22937347 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN539-S Chr12 2969939 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN539-S Chr12 16210343 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN539-S Chr12 16210344 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN539-S Chr12 21231990 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero