FN555-S Chr3 16065796 16065802 0 0 Deletion 6 INTERGENIC Hetero FN555-S Chr3 25337161 25337182 0 0 Deletion 21 INTERGENIC Homo FN555-S Chr4 27158249 27158261 0 0 Deletion 12 INTERGENIC Homo FN555-S Chr4 32568493 32568510 0 0 Deletion 17 INTRON Homo FN555-S Chr5 176980 176983 0 0 Deletion 3 INTERGENIC Hetero FN555-S Chr5 23360373 23360380 0 0 Deletion 7 INTERGENIC Hetero FN555-S Chr6 8488709 8488710 0 0 Deletion 1 INTERGENIC Homo FN555-S Chr6 24582253 24582258 0 0 Deletion 5 INTRON Hetero FN555-S Chr6 27144817 27144818 0 0 Deletion 1 FRAME_SHIFT Hetero OsKitaake06g244200 VSR6_ARATH Vacuolar-sorting receptor 6 OS=Arabidopsis thaliana GN=VSR6 PE=2 SV=Length=63 FN555-S Chr7 602517 602519 0 0 Deletion 2 INTRON Homo FN555-S Chr7 12389437 12389440 0 0 Deletion 3 INTERGENIC Hetero FN555-S Chr7 12390656 12390670 0 0 Deletion 14 INTERGENIC Hetero FN555-S Chr9 21382055 21382059 0 0 Deletion 4 FRAME_SHIFT Homo OsKitaake09g185100 SAU39_ORYSJ Auxin-responsive protein SAUR36 OS=Oryza sativa subsp. japonica GN=SAUR39 PE=2 SV=Length FN555-S Chr10 8231961 8231970 0 0 Deletion 9 INTERGENIC Homo FN555-S Chr12 7304816 7304817 0 0 Deletion 1 INTERGENIC Hetero FN555-S Chr4 15067673 15067673 0 0 Insertion 2 INTERGENIC Hetero FN555-S Chr8 6270971 6270971 0 0 Insertion 2 INTERGENIC Hetero FN555-S Chr11 5594564 5594564 0 0 Insertion 1 INTERGENIC Hetero FN555-S Chr12 23723859 23723859 0 0 Insertion 2 INTERGENIC Hetero FN555-S Chr11 12463451 12463476 0 0 Deletion 25 Hetero 0 FN555-S Chr11 9068637 Chr2 26851790 0 Translocation 0 Hetero OsKitaake11g096200 SBT39_ARATH Subtilisin-like protease SBT3.9 OS=Arabidopsis thaliana GN=SBT3.9 PE=3 SV=Length=75 FN555-S Chr11 9074910 Chr5 40655 0 Translocation 0 Hetero OsKitaake05g000300 A0A0E0PGA2_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=23 FN555-S Chr11 9074924 Chr2 26848555 0 Translocation 0 Hetero FN555-S Chr1 8096365 8096530 0 0 Inversion 0 Hetero OsKitaake01g101300 A2WMR4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01135 PE=4 SV=Len FN555-S Chr1 11439319 11439602 0 0 Inversion 0 Hetero OsKitaake01g139700 A0A0E0MV88_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=60 FN555-S Chr1 12057106 12057418 0 0 Inversion 0 Hetero OsKitaake01g147600 Hypothetical protein FN555-S Chr1 14659664 14659921 0 0 Inversion 0 Hetero OsKitaake01g166000 TPK2_ORYSJ Thiamine pyrophosphokinase 2 OS=Oryza sativa subsp. japonica GN=TPK2 PE=2 SV=Length=26 FN555-S Chr1 20917953 20918061 0 0 Inversion 0 Hetero OsKitaake01g204700 RH15_ORYSJ DEAD-box ATP-dependent RNA helicase 15 OS=Oryza sativa subsp. japonica GN=AIP2 PE=1 SV=Le FN555-S Chr1 35384951 35385259 0 0 Inversion 0 Hetero OsKitaake01g373200 GAMYB_ORYSJ Transcription factor GAMYB OS=Oryza sativa subsp. japonica GN=GAMYB PE=1 SV=Length=55 FN555-S Chr1 36657428 36657915 0 0 Inversion 0 Hetero OsKitaake01g389600 COPD3_ORYSJ Coatomer subunit delta-3 OS=Oryza sativa subsp. japonica GN=Os01g0833700 PE=2 SV=Length= FN555-S Chr1 37312391 37312525 0 0 Inversion 0 Hetero OsKitaake01g398000 HESO1_ARATH Protein HESO1 OS=Arabidopsis thaliana GN=HESO1 PE=1 SV=Length=51 FN555-S Chr1 38622955 38623223 0 0 Inversion 0 Hetero OsKitaake01g412900 EF114_ARATH Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=1 S FN555-S Chr2 1437049 1437399 0 0 Inversion 0 Hetero OsKitaake02g022300 EMC2_XENTR ER membrane protein complex subunit 2 OS=Xenopus tropicalis GN=emc2 PE=2 SV=Length=29 FN555-S Chr2 4095609 4095854 0 0 Inversion 0 Hetero OsKitaake02g057650 A0A0E0NAJ1_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=14 FN555-S Chr2 8280836 8281038 0 0 Inversion 0 Hetero OsKitaake02g105300 SF3A1_ARATH Probable splicing factor 3A subunit 1 OS=Arabidopsis thaliana GN=At1g14650 PE=1 SV=Lengt FN555-S Chr2 12564083 12564500 0 0 Inversion 0 Hetero OsKitaake02g141100 CDA7L_HUMAN Cell division cycle-associated 7-like protein OS=Homo sapiens GN=CDCA7L PE=1 SV=Length=4 FN555-S Chr2 27782033 27782191 0 0 Inversion 0 Hetero OsKitaake02g279300 PIP11_ORYSJ Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=Length=28 FN555-S Chr2 29767953 29768349 0 0 Inversion 0 Hetero OsKitaake02g301000 SYP22_ARATH Syntaxin-22 OS=Arabidopsis thaliana GN=SYP22 PE=1 SV=Length=26 FN555-S Chr2 32743005 32743208 0 0 Inversion 0 Hetero OsKitaake02g335500 ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=Length=5 FN555-S Chr2 34391457 34391678 0 0 Inversion 0 Hetero OsKitaake02g357600 VIP2_NICBE Probable NOT transcription complex subunit VIP2 (Fragment) OS=Nicotiana benthamiana GN=VI FN555-S Chr3 3334306 3334520 0 0 Inversion 0 Hetero OsKitaake03g047300 IP5P4_ARATH Type I inositol polyphosphate 5-phosphatase 4 OS=Arabidopsis thaliana GN=IP5P4 PE=2 SV=L FN555-S Chr3 4105493 4105719 0 0 Inversion 0 Hetero OsKitaake03g058200 F8H_ARATH Probable glucuronoxylan glucuronosyltransferase F8H OS=Arabidopsis thaliana GN=F8H PE=2 SV FN555-S Chr3 5286753 5286887 0 0 Inversion 0 Hetero OsKitaake03g074900 PLT5_ARATH Polyol transporter 5 OS=Arabidopsis thaliana GN=PLT5 PE=1 SV=Length=53 FN555-S Chr3 6534470 6534707 0 0 Inversion 0 Hetero OsKitaake03g093100 NAC8_ARATH SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana GN=SOG1 PE=1 SV=Length=44 FN555-S Chr3 8344127 8344233 0 0 Inversion 0 Hetero OsKitaake03g114900 TPR3_ORYSJ Protein TPR3 OS=Oryza sativa subsp. japonica GN=TPR3 PE=1 SV=Length=113 FN555-S Chr3 11795212 11795312 0 0 Inversion 0 Hetero OsKitaake03g160200 Q10M60_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=Os03g0322200 PE=2 SV=Length=11 FN555-S Chr3 12472031 12472218 0 0 Inversion 0 Hetero OsKitaake03g168400 A0A0E0NUM3_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=34 FN555-S Chr3 12717175 12717307 0 0 Inversion 0 Hetero OsKitaake03g171500 PUSH_ARATH Putative tRNA pseudouridine synthase OS=Arabidopsis thaliana GN=At2g30320 PE=3 SV=Length= FN555-S Chr3 15535220 15535526 0 0 Inversion 0 Hetero OsKitaake03g200100 YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03 OS=Schizosaccharomyces pombe (strain FN555-S Chr3 15711118 15711387 0 0 Inversion 0 Hetero OsKitaake03g201500 CMTA3_ARATH Calmodulin-binding transcription activator 3 OS=Arabidopsis thaliana GN=CMTA3 PE=1 SV=Le FN555-S Chr3 18500679 18501106 0 0 Inversion 0 Hetero OsKitaake03g224200 NAGS2_ARATH Probable amino-acid acetyltransferase NAGS2, chloroplastic OS=Arabidopsis thaliana GN=NA FN555-S Chr3 18551656 18552058 0 0 Inversion 0 Hetero OsKitaake03g224500 A0A0D9Z991_9ORYZ Uncharacterized protein OS=Oryza glumipatula PE=4 SV=Length=68 FN555-S Chr3 27324260 27324448 0 0 Inversion 0 Hetero OsKitaake03g281500 TM56B_XENLA Transmembrane protein 56-B OS=Xenopus laevis GN=tmem56-b PE=2 SV=Length=26 FN555-S Chr4 247659 247950 0 0 Inversion 0 Hetero OsKitaake04g001300 Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis t FN555-S Chr4 7917236 7917442 0 0 Inversion 0 Hetero OsKitaake04g041200 FBD35_ARATH Putative FBD-associated F-box protein At1g78730 OS=Arabidopsis thaliana GN=At1g78730 PE= FN555-S Chr4 22716425 22716574 0 0 Inversion 0 Hetero OsKitaake04g135100 APX7_ORYSJ Probable L-ascorbate peroxidase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=APX7 FN555-S Chr4 33821258 33821375 0 0 Inversion 0 Hetero OsKitaake04g281500 BPA1_ARATH Binding partner of ACD11 1 OS=Arabidopsis thaliana GN=BPA1 PE=1 SV=Length=25 FN555-S Chr4 36356601 36356754 0 0 Inversion 0 Hetero OsKitaake04g315500 PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thal FN555-S Chr5 4834019 4834197 0 0 Inversion 0 Hetero OsKitaake05g054000 CESA1_ORYSJ Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. j FN555-S Chr5 8683279 8683617 0 0 Inversion 0 Hetero OsKitaake05g082600 MCM6_ORYSJ DNA replication licensing factor MCM6 OS=Oryza sativa subsp. japonica GN=Os05g0235800 PE= FN555-S Chr5 16794658 16794943 0 0 Inversion 0 Hetero OsKitaake05g128600 APC1_ARATH Anaphase-promoting complex subunit 1 OS=Arabidopsis thaliana GN=APC1 PE=2 SV=Length=167 FN555-S Chr6 440161 440282 0 0 Inversion 0 Hetero OsKitaake06g003400 A0A0E0PSF9_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=101 FN555-S Chr6 717230 717395 0 0 Inversion 0 Hetero OsKitaake06g007100 BSPA_POPDE Bark storage protein A OS=Populus deltoides GN=BSPA PE=2 SV=Length=31 FN555-S Chr7 331494 331743 0 0 Inversion 0 Hetero OsKitaake07g002700 PER1_ORYSJ Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=Length=32 FN555-S Chr7 13363493 13363838 0 0 Inversion 0 Hetero OsKitaake07g117900 TSS_ARATH Protein TSS OS=Arabidopsis thaliana GN=TSS PE=1 SV=Length=181 FN555-S Chr7 15996404 15996560 0 0 Inversion 0 Hetero OsKitaake07g132300 B8B5S4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25893 PE=4 SV=Len FN555-S Chr7 17355353 17355530 0 0 Inversion 0 Hetero OsKitaake07g141300 B9FX76_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_24247 PE=4 SV=Length=43 FN555-S Chr7 19918556 19918761 0 0 Inversion 0 Hetero OsKitaake07g163200 T5H_TAXCU Taxadiene 5-alpha hydroxylase OS=Taxus cuspidata PE=1 SV=Length=49 FN555-S Chr7 25961225 25961617 0 0 Inversion 0 Hetero OsKitaake07g237300 MY124_ARATH Transcription factor MYB124 OS=Arabidopsis thaliana GN=MYB124 PE=1 SV=Length=43 FN555-S Chr8 1633091 1633261 0 0 Inversion 0 Hetero OsKitaake08g021100 CHUP1_ARATH Protein CHUP1, chloroplastic OS=Arabidopsis thaliana GN=CHUP1 PE=1 SV=Length=100 FN555-S Chr8 2079028 2079267 0 0 Inversion 0 Hetero OsKitaake08g024400 FIE2_MAIZE Polycomb group protein FIE2 OS=Zea mays GN=FIE2 PE=2 SV=Length=37 FN555-S Chr8 9651049 9651415 0 0 Inversion 0 Hetero OsKitaake08g090800 Q5QLM7_ORYSJ Putative uncharacterized protein OJ1112_D12.22 OS=Oryza sativa subsp. japonica GN=OJ111 FN555-S Chr8 9976943 9977074 0 0 Inversion 0 Hetero OsKitaake08g092100 TET7_ARATH Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=Length=26 FN555-S Chr8 27201492 27201624 0 0 Inversion 0 Hetero OsKitaake08g223250 Hypothetical protein FN555-S Chr8 28448140 28448368 0 0 Inversion 0 Hetero OsKitaake08g240900 ACP3_HORVU Acyl carrier protein 3, chloroplastic OS=Hordeum vulgare GN=ACL1.3 PE=1 SV=Length=13 FN555-S Chr9 7393451 7393643 0 0 Inversion 0 Hetero OsKitaake09g042300 Y3720_ARATH UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=2 SV=Length=47 FN555-S Chr9 10814215 10814612 0 0 Inversion 0 Hetero OsKitaake09g067000 BYST_MONBE Bystin OS=Monosiga brevicollis GN=bysl PE=3 SV=Length=41 FN555-S Chr9 11590130 11590408 0 0 Inversion 0 Hetero OsKitaake09g072700 C3H59_ORYSJ Zinc finger CCCH domain-containing protein 59 OS=Oryza sativa subsp. japonica GN=Os09g03 FN555-S Chr9 19887546 19887809 0 0 Inversion 0 Hetero OsKitaake09g165500 GLO2D_ARATH Probable hydroxyacylglutathione hydrolase 2, chloroplastic OS=Arabidopsis thaliana GN=GL FN555-S Chr9 20971028 20971181 0 0 Inversion 0 Hetero OsKitaake09g179600 PSA7B_ORYSJ Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. japonica GN=PAD1 PE=2 SV=Length FN555-S Chr10 11989863 11990103 0 0 Inversion 0 Hetero OsKitaake10g071500 B9G5D1_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_31239 PE=4 SV=Length=189 FN555-S Chr10 16970910 16971142 0 0 Inversion 0 Hetero OsKitaake10g116400 METL1_ARATH Methyltransferase-like protein 1 OS=Arabidopsis thaliana GN=EMB1691 PE=2 SV=Length=77 FN555-S Chr10 17564095 17564282 0 0 Inversion 0 Hetero OsKitaake10g120000 CHR20_ARATH Protein CHROMATIN REMODELING 20 OS=Arabidopsis thaliana GN=ATRX PE=2 SV=Length=147 FN555-S Chr11 9284542 9284679 0 0 Inversion 0 Hetero OsKitaake11g097300 FBL12_ARATH F-box/LRR-repeat protein 12 OS=Arabidopsis thaliana GN=FBL12 PE=2 SV=Length=39 FN555-S Chr11 12316649 12316903 0 0 Inversion 0 Hetero OsKitaake11g112950 PANK1_ORYSJ Pantothenate kinase 1 OS=Oryza sativa subsp. japonica GN=Os06g0207000 PE=2 SV=Length=66 FN555-S Chr11 20268260 20268430 0 0 Inversion 0 Hetero OsKitaake11g158200 MOS14_ARATH Transportin MOS14 OS=Arabidopsis thaliana GN=MOS14 PE=1 SV=Length=95 FN555-S Chr11 23764324 23764701 0 0 Inversion 0 Hetero OsKitaake11g189900 HA22A_ARATH HVA22-like protein a OS=Arabidopsis thaliana GN=HVA22A PE=2 SV=Length=17 FN555-S Chr11 24689502 24689624 0 0 Inversion 0 Hetero OsKitaake11g200300 UBP2_ARATH Ubiquitin carboxyl-terminal hydrolase 2 OS=Arabidopsis thaliana GN=UBP2 PE=1 SV=Length=96 FN555-S Chr11 25673472 25673685 0 0 Inversion 0 Hetero OsKitaake11g207400 RS29_WHEAT 40S ribosomal protein S29 OS=Triticum aestivum GN=RPS29 PE=1 SV=Length=5 FN555-S Chr12 33743 33909 0 0 Inversion 0 Hetero OsKitaake12g000400 Q2QZ00_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=Os11g0100300 PE=4 SV=Length=84 FN555-S Chr12 23618003 23618165 0 0 Inversion 0 Hetero OsKitaake12g189700 P2C78_ORYSJ Probable protein phosphatase 2C 78 OS=Oryza sativa subsp. japonica GN=Os12g0580900 PE=2 FN555-S Chr12 26877890 26878078 0 0 Inversion 0 Hetero OsKitaake12g224500 ANKK1_HUMAN Ankyrin repeat and protein kinase domain-containing protein 1 OS=Homo sapiens GN=ANKK1 P FN555-S Chr1 8096365 8096530 0 0 Inversion 0 Hetero OsKitaake01g101300 A2WMR4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01135 PE=4 SV=Len FN555-S Chr1 11439319 11439602 0 0 Inversion 0 Hetero OsKitaake01g139700 A0A0E0MV88_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=60 FN555-S Chr1 12057106 12057418 0 0 Inversion 0 Hetero OsKitaake01g147600 Hypothetical protein FN555-S Chr1 14257103 14257401 0 0 Inversion 0 Hetero OsKitaake01g163000 R13L4_ARATH Disease resistance RPP13-like protein 4 OS=Arabidopsis thaliana GN=RPP13L4 PE=1 SV=Lengt FN555-S Chr1 14659664 14659921 0 0 Inversion 0 Hetero OsKitaake01g166000 TPK2_ORYSJ Thiamine pyrophosphokinase 2 OS=Oryza sativa subsp. japonica GN=TPK2 PE=2 SV=Length=26 FN555-S Chr1 20917953 20918061 0 0 Inversion 0 Hetero OsKitaake01g204700 RH15_ORYSJ DEAD-box ATP-dependent RNA helicase 15 OS=Oryza sativa subsp. japonica GN=AIP2 PE=1 SV=Le FN555-S Chr1 35384951 35385259 0 0 Inversion 0 Hetero OsKitaake01g373200 GAMYB_ORYSJ Transcription factor GAMYB OS=Oryza sativa subsp. japonica GN=GAMYB PE=1 SV=Length=55 FN555-S Chr1 36657428 36657915 0 0 Inversion 0 Hetero OsKitaake01g389600 COPD3_ORYSJ Coatomer subunit delta-3 OS=Oryza sativa subsp. japonica GN=Os01g0833700 PE=2 SV=Length= FN555-S Chr1 38622955 38623223 0 0 Inversion 0 Hetero OsKitaake01g412900 EF114_ARATH Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=1 S FN555-S Chr2 1437049 1437399 0 0 Inversion 0 Hetero OsKitaake02g022300 EMC2_XENTR ER membrane protein complex subunit 2 OS=Xenopus tropicalis GN=emc2 PE=2 SV=Length=29 FN555-S Chr2 4095609 4095854 0 0 Inversion 0 Hetero OsKitaake02g057650 A0A0E0NAJ1_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=14 FN555-S Chr2 8280836 8281038 0 0 Inversion 0 Hetero OsKitaake02g105300 SF3A1_ARATH Probable splicing factor 3A subunit 1 OS=Arabidopsis thaliana GN=At1g14650 PE=1 SV=Lengt FN555-S Chr2 12564083 12564500 0 0 Inversion 0 Hetero OsKitaake02g141100 CDA7L_HUMAN Cell division cycle-associated 7-like protein OS=Homo sapiens GN=CDCA7L PE=1 SV=Length=4 FN555-S Chr2 27782033 27782191 0 0 Inversion 0 Hetero OsKitaake02g279300 PIP11_ORYSJ Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=Length=28 FN555-S Chr2 29767953 29768349 0 0 Inversion 0 Hetero OsKitaake02g301000 SYP22_ARATH Syntaxin-22 OS=Arabidopsis thaliana GN=SYP22 PE=1 SV=Length=26 FN555-S Chr2 32743005 32743208 0 0 Inversion 0 Hetero OsKitaake02g335500 ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=Length=5 FN555-S Chr2 34391457 34391678 0 0 Inversion 0 Hetero OsKitaake02g357600 VIP2_NICBE Probable NOT transcription complex subunit VIP2 (Fragment) OS=Nicotiana benthamiana GN=VI FN555-S Chr2 34689194 34689452 0 0 Inversion 0 Hetero OsKitaake02g361500 RING4_ARATH E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=Lengt FN555-S Chr3 3334306 3334520 0 0 Inversion 0 Hetero OsKitaake03g047300 IP5P4_ARATH Type I inositol polyphosphate 5-phosphatase 4 OS=Arabidopsis thaliana GN=IP5P4 PE=2 SV=L FN555-S Chr3 4105493 4105719 0 0 Inversion 0 Hetero OsKitaake03g058200 F8H_ARATH Probable glucuronoxylan glucuronosyltransferase F8H OS=Arabidopsis thaliana GN=F8H PE=2 SV FN555-S Chr3 5286753 5286887 0 0 Inversion 0 Hetero OsKitaake03g074900 PLT5_ARATH Polyol transporter 5 OS=Arabidopsis thaliana GN=PLT5 PE=1 SV=Length=53 FN555-S Chr3 6534470 6534707 0 0 Inversion 0 Hetero OsKitaake03g093100 NAC8_ARATH SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana GN=SOG1 PE=1 SV=Length=44 FN555-S Chr3 8344127 8344233 0 0 Inversion 0 Hetero OsKitaake03g114900 TPR3_ORYSJ Protein TPR3 OS=Oryza sativa subsp. japonica GN=TPR3 PE=1 SV=Length=113 FN555-S Chr3 12472031 12472218 0 0 Inversion 0 Hetero OsKitaake03g168400 A0A0E0NUM3_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=34 FN555-S Chr3 12717175 12717307 0 0 Inversion 0 Hetero OsKitaake03g171500 PUSH_ARATH Putative tRNA pseudouridine synthase OS=Arabidopsis thaliana GN=At2g30320 PE=3 SV=Length= FN555-S Chr3 15535220 15535526 0 0 Inversion 0 Hetero OsKitaake03g200100 YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03 OS=Schizosaccharomyces pombe (strain FN555-S Chr3 15711118 15711387 0 0 Inversion 0 Hetero OsKitaake03g201500 CMTA3_ARATH Calmodulin-binding transcription activator 3 OS=Arabidopsis thaliana GN=CMTA3 PE=1 SV=Le FN555-S Chr3 18500679 18501106 0 0 Inversion 0 Hetero OsKitaake03g224200 NAGS2_ARATH Probable amino-acid acetyltransferase NAGS2, chloroplastic OS=Arabidopsis thaliana GN=NA FN555-S Chr3 18551656 18552058 0 0 Inversion 0 Hetero OsKitaake03g224500 A0A0D9Z991_9ORYZ Uncharacterized protein OS=Oryza glumipatula PE=4 SV=Length=68 FN555-S Chr3 27324260 27324448 0 0 Inversion 0 Hetero OsKitaake03g281500 TM56B_XENLA Transmembrane protein 56-B OS=Xenopus laevis GN=tmem56-b PE=2 SV=Length=26 FN555-S Chr4 247659 247950 0 0 Inversion 0 Hetero OsKitaake04g001300 Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis t FN555-S Chr4 7436787 7437032 0 0 Inversion 0 Hetero OsKitaake04g037833 Hypothetical protein FN555-S Chr4 7917236 7917442 0 0 Inversion 0 Hetero OsKitaake04g041200 FBD35_ARATH Putative FBD-associated F-box protein At1g78730 OS=Arabidopsis thaliana GN=At1g78730 PE= FN555-S Chr4 22716425 22716574 0 0 Inversion 0 Hetero OsKitaake04g135100 APX7_ORYSJ Probable L-ascorbate peroxidase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=APX7 FN555-S Chr4 33821258 33821375 0 0 Inversion 0 Hetero OsKitaake04g281500 BPA1_ARATH Binding partner of ACD11 1 OS=Arabidopsis thaliana GN=BPA1 PE=1 SV=Length=25 FN555-S Chr4 36356601 36356754 0 0 Inversion 0 Hetero OsKitaake04g315500 PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thal FN555-S Chr5 4834019 4834197 0 0 Inversion 0 Hetero OsKitaake05g054000 CESA1_ORYSJ Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. j FN555-S Chr5 8683279 8683617 0 0 Inversion 0 Hetero OsKitaake05g082600 MCM6_ORYSJ DNA replication licensing factor MCM6 OS=Oryza sativa subsp. japonica GN=Os05g0235800 PE= FN555-S Chr5 16794658 16794943 0 0 Inversion 0 Hetero OsKitaake05g128600 APC1_ARATH Anaphase-promoting complex subunit 1 OS=Arabidopsis thaliana GN=APC1 PE=2 SV=Length=167 FN555-S Chr6 440161 440282 0 0 Inversion 0 Hetero OsKitaake06g003400 A0A0E0PSF9_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=101 FN555-S Chr7 2588792 2589054 0 0 Inversion 0 Hetero OsKitaake07g034100 PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN=PCMP-H2 FN555-S Chr7 13363493 13363838 0 0 Inversion 0 Hetero OsKitaake07g117900 TSS_ARATH Protein TSS OS=Arabidopsis thaliana GN=TSS PE=1 SV=Length=181 FN555-S Chr7 15996404 15996560 0 0 Inversion 0 Hetero OsKitaake07g132300 B8B5S4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25893 PE=4 SV=Len FN555-S Chr7 17355353 17355530 0 0 Inversion 0 Hetero OsKitaake07g141300 B9FX76_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_24247 PE=4 SV=Length=43 FN555-S Chr7 19918556 19918761 0 0 Inversion 0 Hetero OsKitaake07g163200 T5H_TAXCU Taxadiene 5-alpha hydroxylase OS=Taxus cuspidata PE=1 SV=Length=49 FN555-S Chr7 25961225 25961617 0 0 Inversion 0 Hetero OsKitaake07g237300 MY124_ARATH Transcription factor MYB124 OS=Arabidopsis thaliana GN=MYB124 PE=1 SV=Length=43 FN555-S Chr8 1633091 1633261 0 0 Inversion 0 Hetero OsKitaake08g021100 CHUP1_ARATH Protein CHUP1, chloroplastic OS=Arabidopsis thaliana GN=CHUP1 PE=1 SV=Length=100 FN555-S Chr8 2079028 2079267 0 0 Inversion 0 Hetero OsKitaake08g024400 FIE2_MAIZE Polycomb group protein FIE2 OS=Zea mays GN=FIE2 PE=2 SV=Length=37 FN555-S Chr8 9651049 9651415 0 0 Inversion 0 Hetero OsKitaake08g090800 Q5QLM7_ORYSJ Putative uncharacterized protein OJ1112_D12.22 OS=Oryza sativa subsp. japonica GN=OJ111 FN555-S Chr8 9976943 9977074 0 0 Inversion 0 Hetero OsKitaake08g092100 TET7_ARATH Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=Length=26 FN555-S Chr8 27201492 27201624 0 0 Inversion 0 Hetero OsKitaake08g223250 Hypothetical protein FN555-S Chr8 28448140 28448368 0 0 Inversion 0 Hetero OsKitaake08g240900 ACP3_HORVU Acyl carrier protein 3, chloroplastic OS=Hordeum vulgare GN=ACL1.3 PE=1 SV=Length=13 FN555-S Chr9 7393451 7393643 0 0 Inversion 0 Hetero OsKitaake09g042300 Y3720_ARATH UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=2 SV=Length=47 FN555-S Chr9 10814215 10814612 0 0 Inversion 0 Hetero OsKitaake09g067000 BYST_MONBE Bystin OS=Monosiga brevicollis GN=bysl PE=3 SV=Length=41 FN555-S Chr9 11590130 11590408 0 0 Inversion 0 Hetero OsKitaake09g072700 C3H59_ORYSJ Zinc finger CCCH domain-containing protein 59 OS=Oryza sativa subsp. japonica GN=Os09g03 FN555-S Chr9 19887546 19887809 0 0 Inversion 0 Hetero OsKitaake09g165500 GLO2D_ARATH Probable hydroxyacylglutathione hydrolase 2, chloroplastic OS=Arabidopsis thaliana GN=GL FN555-S Chr9 20971028 20971181 0 0 Inversion 0 Hetero OsKitaake09g179600 PSA7B_ORYSJ Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. japonica GN=PAD1 PE=2 SV=Length FN555-S Chr10 11989863 11990103 0 0 Inversion 0 Hetero OsKitaake10g071500 B9G5D1_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_31239 PE=4 SV=Length=189 FN555-S Chr10 16970910 16971142 0 0 Inversion 0 Hetero OsKitaake10g116400 METL1_ARATH Methyltransferase-like protein 1 OS=Arabidopsis thaliana GN=EMB1691 PE=2 SV=Length=77 FN555-S Chr10 17564095 17564282 0 0 Inversion 0 Hetero OsKitaake10g120000 CHR20_ARATH Protein CHROMATIN REMODELING 20 OS=Arabidopsis thaliana GN=ATRX PE=2 SV=Length=147 FN555-S Chr11 9284542 9284679 0 0 Inversion 0 Hetero OsKitaake11g097300 FBL12_ARATH F-box/LRR-repeat protein 12 OS=Arabidopsis thaliana GN=FBL12 PE=2 SV=Length=39 FN555-S Chr11 12316649 12316903 0 0 Inversion 0 Hetero OsKitaake11g112950 PANK1_ORYSJ Pantothenate kinase 1 OS=Oryza sativa subsp. japonica GN=Os06g0207000 PE=2 SV=Length=66 FN555-S Chr11 20268260 20268430 0 0 Inversion 0 Hetero OsKitaake11g158200 MOS14_ARATH Transportin MOS14 OS=Arabidopsis thaliana GN=MOS14 PE=1 SV=Length=95 FN555-S Chr11 23764324 23764701 0 0 Inversion 0 Hetero OsKitaake11g189900 HA22A_ARATH HVA22-like protein a OS=Arabidopsis thaliana GN=HVA22A PE=2 SV=Length=17 FN555-S Chr11 24689502 24689624 0 0 Inversion 0 Hetero OsKitaake11g200300 UBP2_ARATH Ubiquitin carboxyl-terminal hydrolase 2 OS=Arabidopsis thaliana GN=UBP2 PE=1 SV=Length=96 FN555-S Chr12 33743 33909 0 0 Inversion 0 Hetero OsKitaake12g000400 Q2QZ00_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=Os11g0100300 PE=4 SV=Length=84 FN555-S Chr12 23618003 23618165 0 0 Inversion 0 Hetero OsKitaake12g189700 P2C78_ORYSJ Probable protein phosphatase 2C 78 OS=Oryza sativa subsp. japonica GN=Os12g0580900 PE=2 FN555-S Chr12 26877890 26878078 0 0 Inversion 0 Hetero OsKitaake12g224500 ANKK1_HUMAN Ankyrin repeat and protein kinase domain-containing protein 1 OS=Homo sapiens GN=ANKK1 P FN555-S Chr1 1247108 1247368 0 0 Inversion 0 Hetero FN555-S Chr1 5433884 5434209 0 0 Inversion 0 Hetero FN555-S Chr1 9848272 9848568 0 0 Inversion 0 Hetero FN555-S Chr1 12035414 12035819 0 0 Inversion 0 Hetero FN555-S Chr2 1982066 1982236 0 0 Inversion 0 Hetero FN555-S Chr2 3265117 3265580 0 0 Inversion 0 Hetero FN555-S Chr2 8272591 8272756 0 0 Inversion 0 Hetero FN555-S Chr2 8580103 8580345 0 0 Inversion 0 Hetero FN555-S Chr2 15883204 15883374 0 0 Inversion 0 Hetero FN555-S Chr2 22702568 22702852 0 0 Inversion 0 Hetero FN555-S Chr2 22793936 22794142 0 0 Inversion 0 Hetero FN555-S Chr2 32608071 32608290 0 0 Inversion 0 Hetero FN555-S Chr3 147614 147925 0 0 Inversion 0 Hetero FN555-S Chr3 11468279 11468577 0 0 Inversion 0 Hetero FN555-S Chr3 20864649 20864781 0 0 Inversion 0 Hetero FN555-S Chr3 28117253 28117575 0 0 Inversion 0 Hetero FN555-S Chr3 35924006 35924224 0 0 Inversion 0 Hetero FN555-S Chr4 8737509 8737787 0 0 Inversion 0 Hetero FN555-S Chr4 20686016 20686259 0 0 Inversion 0 Hetero FN555-S Chr4 27876141 27876325 0 0 Inversion 0 Hetero FN555-S Chr5 321195 321342 0 0 Inversion 0 Hetero FN555-S Chr5 1766192 1766418 0 0 Inversion 0 Hetero FN555-S Chr5 6130503 6130843 0 0 Inversion 0 Hetero FN555-S Chr5 10628102 10628429 0 0 Inversion 0 Hetero FN555-S Chr5 17720029 17720183 0 0 Inversion 0 Hetero FN555-S Chr5 22999357 22999541 0 0 Inversion 0 Hetero FN555-S Chr5 26546271 26546544 0 0 Inversion 0 Hetero FN555-S Chr5 28850395 28850698 0 0 Inversion 0 Hetero FN555-S Chr6 20551517 20551875 0 0 Inversion 0 Hetero FN555-S Chr7 14997579 14997903 0 0 Inversion 0 Hetero FN555-S Chr7 16696921 16697145 0 0 Inversion 0 Hetero FN555-S Chr8 1282696 1283039 0 0 Inversion 0 Hetero FN555-S Chr8 23683620 23683826 0 0 Inversion 0 Hetero FN555-S Chr9 1760586 1760963 0 0 Inversion 0 Hetero FN555-S Chr9 10649541 10649814 0 0 Inversion 0 Hetero FN555-S Chr9 12882042 12882157 0 0 Inversion 0 Hetero FN555-S Chr9 13416705 13416844 0 0 Inversion 0 Hetero FN555-S Chr11 8800281 8800570 0 0 Inversion 0 Hetero FN555-S Chr11 26140403 26140686 0 0 Inversion 0 Hetero FN555-S Chr12 2298002 2298177 0 0 Inversion 0 Hetero FN555-S Chr11 6313001 6325000 0 0 Deletion 11999 FN555-S Chr11 8076001 8209000 0 0 Deletion 132999 OsKitaake11g089100 Y5977_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thali FN555-S Chr11 8076001 8209000 0 0 Deletion 132999 OsKitaake11g089150 Q53NA0_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os11g14060 PE=2 SV=Length=22 FN555-S Chr11 8076001 8209000 0 0 Deletion 132999 OsKitaake11g089200 Hypothetical protein FN555-S Chr11 8076001 8209000 0 0 Deletion 132999 OsKitaake11g089300 A0A0E0BH93_9ORYZ Uncharacterized protein OS=Oryza glumipatula PE=4 SV=Length=13 FN555-S Chr11 8076001 8209000 0 0 Deletion 132999 OsKitaake11g089400 A0A0E0R6C1_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=27 FN555-S Chr11 8076001 8209000 0 0 Deletion 132999 OsKitaake11g089500 HGNAT_MOUSE Heparan-alpha-glucosaminide N-acetyltransferase OS=Mus musculus GN=Hgsnat PE=1 SV=Length FN555-S Chr11 8076001 8209000 0 0 Deletion 132999 OsKitaake11g089600 DRL21_ARATH Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=3 FN555-S Chr11 8076001 8209000 0 0 Deletion 132999 OsKitaake11g089700 MTEF8_ARATH Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana GN=MTERF8 FN555-S Chr11 8076001 8209000 0 0 Deletion 132999 OsKitaake11g089800 FBK46_ARATH F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana GN=At2g44130 PE=2 SV=Length FN555-S Chr11 8076001 8209000 0 0 Deletion 132999 OsKitaake11g089900 GSTT3_ARATH Glutathione S-transferase T3 OS=Arabidopsis thaliana GN=GSTT3 PE=2 SV=Length=59 FN555-S Chr11 8076001 8209000 0 0 Deletion 132999 OsKitaake11g090000 DGP14_ARATH Putative protease Do-like 14 OS=Arabidopsis thaliana GN=DEGP14 PE=3 SV=Length=42 FN555-S Chr1 4139785 T-G 0 0 Single Base Substitution 0 INTERGENIC Homo FN555-S Chr1 27140369 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN555-S Chr1 29885314 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN555-S Chr2 409628 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr2 13858374 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr2 24762784 T-G 0 0 Single Base Substitution 0 UTR_5_PRIME Hetero FN555-S Chr2 24994266 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr3 14034252 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr3 32242080 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr4 13263907 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr4 13488998 G-T 0 0 Single Base Substitution 0 INTRON Hetero FN555-S Chr4 16302819 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr4 16471006 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr4 26336482 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr4 32072065 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN555-S Chr6 11857284 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr6 22334329 T-A 0 0 Single Base Substitution 0 INTRON Hetero FN555-S Chr7 3598802 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr7 9707171 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr7 11232091 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr7 19789414 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN555-S Chr8 1465133 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr8 6765850 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr8 15780199 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN555-S Chr8 20408991 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr8 22968159 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr8 23927254 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr8 27774765 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr8 28627825 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr9 1264129 C-T 0 0 Single Base Substitution 0 INTRON Homo FN555-S Chr9 1422428 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN555-S Chr9 21979795 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo OsKitaake09g195900 B561A_ARATH Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830 OS=Arabidopsis thali FN555-S Chr10 14884834 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr11 856994 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN555-S Chr11 3958285 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr12 1084846 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr12 26331136 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN555-S Chr12 27096733 C-T 0 0 Single Base Substitution 0 INTRON Hetero