FN624-S Chr1 3352590 3352596 0 0 Deletion 6 CODON_CHANGE_PLUS_CODON_DELETION Hetero OsKitaake01g044000 AGP30_ARATH Non-classical arabinogalactan protein 30 OS=Arabidopsis thaliana GN=AGP30 PE=2 SV=Length FN624-S Chr1 7263232 7263239 0 0 Deletion 7 INTERGENIC Homo FN624-S Chr2 21792251 21792259 0 0 Deletion 8 INTERGENIC Hetero FN624-S Chr4 36913351 36913352 0 0 Deletion 1 INTRON Homo FN624-S Chr5 14817958 14817967 0 0 Deletion 9 INTERGENIC Homo FN624-S Chr5 16885602 16885616 0 0 Deletion 14 INTRON Hetero FN624-S Chr6 13062507 13062508 0 0 Deletion 1 INTRON Hetero FN624-S Chr7 3745799 3745803 0 0 Deletion 4 INTERGENIC Hetero FN624-S Chr7 10222302 10222305 0 0 Deletion 3 INTERGENIC Homo FN624-S Chr7 22731669 22731671 0 0 Deletion 2 FRAME_SHIFT Hetero OsKitaake07g194800 NORK_MEDTR Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=Length=92 FN624-S Chr10 3515569 3515570 0 0 Deletion 1 INTERGENIC Homo FN624-S Chr10 15882340 15882341 0 0 Deletion 1 INTERGENIC Homo FN624-S Chr12 9663504 9663509 0 0 Deletion 5 INTERGENIC Homo FN624-S Chr8 21632521 21632521 0 0 Insertion 2 INTERGENIC Hetero FN624-S Chr1 27960414 27960514 0 0 Deletion 100 Hetero 0 FN624-S Chr8 2704318 2704327 0 0 Deletion 9 Hetero 0 FN624-S Chr1 27824595 28011725 0 0 Inversion 0 Hetero OsKitaake01g270000 ASPR1_ORYSJ Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=L FN624-S Chr1 27824595 28011722 0 0 Inversion 0 Hetero OsKitaake01g270000 ASPR1_ORYSJ Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=L FN624-S Chr10 15151247 15178396 0 0 Inversion 0 Homo OsKitaake10g096000 GSHRP_ARATH Glutathione reductase, chloroplastic OS=Arabidopsis thaliana GN=EMB2360 PE=2 SV=Length=5 FN624-S Chr1 27824595 28011725 0 0 Inversion 0 Hetero OsKitaake01g272400 R18AL_ARATH 60S ribosomal protein L18a-like protein OS=Arabidopsis thaliana GN=At1g29970 PE=2 SV=Len FN624-S Chr1 27824595 28011722 0 0 Inversion 0 Hetero OsKitaake01g272400 R18AL_ARATH 60S ribosomal protein L18a-like protein OS=Arabidopsis thaliana GN=At1g29970 PE=2 SV=Len FN624-S Chr10 15151247 15178396 0 0 Inversion 0 Homo OsKitaake10g096400 AARE1_ORYSJ Acylamino-acid-releasing enzyme 1 OS=Oryza sativa subsp. japonica GN=Os10g0415600 PE=3 S FN624-S Chr2 17018778 17240059 0 0 Inversion 0 Hetero FN624-S Chr1 30710001 30737000 0 0 Deletion 26999 OsKitaake01g304050 Hypothetical protein FN624-S Chr1 30710001 30737000 0 0 Deletion 26999 OsKitaake01g304100 BRI1_ORYSJ Brassinosteroid LRR receptor kinase BRI1 OS=Oryza sativa subsp. japonica GN=BRI1 PE=1 SV= FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g225200 RAC2_ORYSJ Rac-like GTP-binding protein 2 OS=Oryza sativa subsp. japonica GN=RAC2 PE=2 SV=Length=21 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g225300 PIP_ARATH Proline iminopeptidase OS=Arabidopsis thaliana GN=PIP PE=2 SV=Length=38 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g225400 CIPKJ_ORYSJ CBL-interacting protein kinase 19 OS=Oryza sativa subsp. japonica GN=CIPK19 PE=1 SV=Leng FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g225500 TLP9_ORYSJ Tubby-like F-box protein 9 OS=Oryza sativa subsp. japonica GN=TULP9 PE=2 SV=Length=37 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g225600 Q68Y47_ORYSJ Os05g0514400 protein OS=Oryza sativa subsp. japonica GN=Os05g0514400 PE=4 SV=Length=51 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g225700 ICR1_ARATH Interactor of constitutive active ROPs 1 OS=Arabidopsis thaliana GN=ICR1 PE=1 SV=Length=3 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g225800 G2OX_PHACN Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=Length=33 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g225900 CLE6_ARATH CLAVATA3/ESR (CLE)-related protein 6 OS=Arabidopsis thaliana GN=CLE6 PE=2 SV=Length=8 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g226000 Q68Y42_ORYSJ Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_19192 PE=4 SV=Length=8 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g226100 C71A1_PERAE Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=Length=50 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g226200 ARFN_ORYSJ Auxin response factor 14 OS=Oryza sativa subsp. japonica GN=ARF14 PE=2 SV=Length=68 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g226300 ZRP4_MAIZE O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 SV=Length=36 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g226400 ZRP4_MAIZE O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 SV=Length=36 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g226500 VOZ1_ARATH Transcription factor VOZ1 OS=Arabidopsis thaliana GN=VOZ1 PE=1 SV=Length=48 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g226600 NAC71_ORYSJ NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=Length FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g226700 HAP28_HUMAN 28 kDa heat- and acid-stable phosphoprotein OS=Homo sapiens GN=PDAP1 PE=1 SV=Length=18 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g226800 A0A0E0PPY8_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=11 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g226900 YC52L_SYNY3 Uncharacterized N-acetyltransferase ycf52-like OS=Synechocystis sp. (strain PCC 6803 / K FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g227000 PERK3_ARATH Proline-rich receptor-like protein kinase PERK3 OS=Arabidopsis thaliana GN=PERK3 PE=2 SV FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g227100 RAB7_CENCI Ras-related protein Rab7 OS=Cenchrus ciliaris PE=2 SV=Length=20 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g227200 Q75IJ0_ORYSJ Os05g0516700 protein OS=Oryza sativa subsp. japonica GN=Os05g0516700 PE=4 SV=Length=18 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g227300 RIC2_ORYSJ Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=Length=21 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g227400 LAZH1_ARATH Protein LAZ1 homolog 1 OS=Arabidopsis thaliana GN=At1g77220 PE=2 SV=Length=48 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g227500 OFP4_ARATH Transcription repressor OFP4 OS=Arabidopsis thaliana GN=OFP4 PE=1 SV=Length=31 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g227600 TPS7_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 OS=Arabidopsis thaliana FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g227700 Q75II6_ORYSJ Os05g0517400 protein OS=Oryza sativa subsp. japonica GN=Os05g0517400 PE=2 SV=Length=13 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g227800 GGH2_ARATH Gamma-glutamyl hydrolase 2 OS=Arabidopsis thaliana GN=GGH2 PE=1 SV=Length=34 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g227900 HBL1_ORYSJ Non-symbiotic hemoglobin 1 OS=Oryza sativa subsp. japonica GN=HB1 PE=1 SV=Length=16 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g228100 Q75II3_ORYSJ Os05g0517800 protein OS=Oryza sativa subsp. japonica GN=Os05g0517800 PE=4 SV=Length=7 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g228200 CPD_ARATH Cyclic phosphodiesterase OS=Arabidopsis thaliana GN=At4g18930 PE=1 SV=Length=18 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g228300 HD3A_ORYSJ Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica GN=HD3A PE=1 SV=Length=17 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g228200 CPD_ARATH Cyclic phosphodiesterase OS=Arabidopsis thaliana GN=At4g18930 PE=1 SV=Length=18 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g228300 HD3A_ORYSJ Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica GN=HD3A PE=1 SV=Length=17 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g228400 Q75II1_ORYSJ Os05g0518200 protein OS=Oryza sativa subsp. japonica GN=Os05g0518200 PE=4 SV=Length=105 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g228500 GDL82_ARATH GDSL esterase/lipase At5g45670 OS=Arabidopsis thaliana GN=At5g45670 PE=2 SV=Length=36 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g228600 TPS1_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana GN=TPS1 FN624-S Chr5 25669001 25938000 0 0 Deletion 268999 OsKitaake05g228700 A0A0E0PQ08_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=16 FN624-S Chr10 13677001 13693000 0 0 Deletion 15999 OsKitaake10g083200 TI11F_ORYSJ Protein TIFY 11f OS=Oryza sativa subsp. japonica GN=TIFY11F PE=3 SV=Length=33 FN624-S Chr10 13677001 13693000 0 0 Deletion 15999 OsKitaake10g083201 TI11F_ORYSJ Protein TIFY 11f OS=Oryza sativa subsp. japonica GN=TIFY11F PE=3 SV=Length=33 FN624-S Chr1 6620720 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN624-S Chr1 6620726 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN624-S Chr1 19248445 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN624-S Chr1 19706718 G-C 0 0 Single Base Substitution 0 INTRON Homo FN624-S Chr1 19914232 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN624-S Chr1 42831083 T-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN624-S Chr2 2238109 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN624-S Chr2 25195010 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN624-S Chr5 1747002 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN624-S Chr5 2601585 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN624-S Chr5 4201423 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN624-S Chr5 28790542 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN624-S Chr6 6561560 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN624-S Chr6 11627598 T-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN624-S Chr7 6334397 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN624-S Chr7 6334402 A-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN624-S Chr7 22399423 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN624-S Chr8 20413750 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN624-S Chr9 3198658 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN624-S Chr9 4001072 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN624-S Chr9 13988642 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN624-S Chr10 12528327 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN624-S Chr10 23232216 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN624-S Chr12 5858369 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN624-S Chr12 6518810 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME Homo FN624-S Chr12 15520398 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME Homo FN624-S Chr12 15520399 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME Homo FN624-S Chr12 16645364 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN624-S Chr12 17863947 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo