FN904-S Chr1 13781075 13781077 0 0 Deletion 2 INTERGENIC Hetero FN904-S Chr1 32241298 32241299 0 0 Deletion 1 INTERGENIC Homo FN904-S Chr2 19114419 19114420 0 0 Deletion 1 FRAME_SHIFT Hetero OsKitaake02g186600 OML4_ORYSJ Protein MEI2-like 4 OS=Oryza sativa subsp. japonica GN=ML4 PE=2 SV=Length=100 FN904-S Chr3 4047766 4047769 0 0 Deletion 3 INTERGENIC Hetero FN904-S Chr3 6454976 6454982 0 0 Deletion 6 CODON_CHANGE_PLUS_CODON_DELETION Hetero OsKitaake03g091800 HEXO2_ARATH Beta-hexosaminidase 2 OS=Arabidopsis thaliana GN=HEXO2 PE=1 SV=Length=58 FN904-S Chr3 14063971 14063972 0 0 Deletion 1 INTERGENIC Hetero FN904-S Chr3 36524067 36524072 0 0 Deletion 5 INTRON Hetero FN904-S Chr4 1571622 1571629 0 0 Deletion 7 FRAME_SHIFT Hetero OsKitaake04g010800 LRK91_ARATH L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 FN904-S Chr5 12589221 12589223 0 0 Deletion 2 INTERGENIC Hetero FN904-S Chr5 15581546 15581554 0 0 Deletion 8 INTERGENIC Hetero FN904-S Chr8 8273884 8273892 0 0 Deletion 8 INTERGENIC Homo FN904-S Chr9 17687146 17687147 0 0 Deletion 1 FRAME_SHIFT Homo OsKitaake09g133800 WAK3_ARATH Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=Length=74 FN904-S Chr10 5691693 5691694 0 0 Deletion 1 FRAME_SHIFT+START_LOST Hetero OsKitaake10g039400 ERLL1_ARATH pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana GN=AZI1 PE=1 SV=Length=16 FN904-S Chr10 16652587 16652592 0 0 Deletion 5 INTRON Hetero FN904-S Chr10 17441986 17441987 0 0 Deletion 1 UTR_3_PRIME Homo FN904-S Chr11 20421729 20421730 0 0 Deletion 1 INTRON Homo FN904-S Chr12 10426140 10426147 0 0 Deletion 7 INTERGENIC Homo FN904-S Chr12 14121858 14121859 0 0 Deletion 1 INTERGENIC Hetero FN904-S Chr5 15149474 15149474 0 0 Insertion 2 INTERGENIC Hetero FN904-S Chr6 22119319 22119319 0 0 Insertion 1 INTERGENIC Homo FN904-S Chr7 13755670 13755670 0 0 Insertion 4 INTERGENIC Hetero FN904-S Chr7 5392040 Chr5 2176333 0 Translocation 0 Hetero OsKitaake07g065500 RH52B_ORYSJ DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp. japonica GN=PL10B PE=2 SV FN904-S Chr7 5392040 Chr5 2117174 0 Translocation 0 Hetero OsKitaake07g065500 RH52B_ORYSJ DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp. japonica GN=PL10B PE=2 SV FN904-S Chr7 5392040 Chr5 2117174 0 Translocation 0 Hetero OsKitaake05g023700 Q65XT4_ORYSJ Os05g0131900 protein OS=Oryza sativa subsp. japonica GN=Os05g0131900 PE=2 SV=Length=25 FN904-S Chr9 11813730 Chr7 5181579 0 Translocation 0 Hetero OsKitaake07g063300 NAC47_ARATH NAC transcription factor 47 OS=Arabidopsis thaliana GN=NAC047 PE=2 SV=Length=35 FN904-S Chr8 22464542 Chr3 9824310 0 Translocation 0 Hetero FN904-S Chr9 11813730 Chr7 5403119 0 Translocation 0 Hetero FN904-S Chr5 2117174 2175968 0 0 Inversion 0 Hetero OsKitaake05g023700 Q65XT4_ORYSJ Os05g0131900 protein OS=Oryza sativa subsp. japonica GN=Os05g0131900 PE=2 SV=Length=25 FN904-S Chr7 5181003 5392027 0 0 Inversion 0 Hetero OsKitaake07g063300 NAC47_ARATH NAC transcription factor 47 OS=Arabidopsis thaliana GN=NAC047 PE=2 SV=Length=35 FN904-S Chr7 5181010 5403129 0 0 Inversion 0 Hetero OsKitaake07g063300 NAC47_ARATH NAC transcription factor 47 OS=Arabidopsis thaliana GN=NAC047 PE=2 SV=Length=35 FN904-S Chr7 5181003 5392027 0 0 Inversion 0 Hetero OsKitaake07g065500 RH52B_ORYSJ DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp. japonica GN=PL10B PE=2 SV FN904-S Chr4 30931341 30943436 0 0 Inversion 0 Hetero FN904-S Chr4 30931347 30943452 0 0 Inversion 0 Hetero FN904-S Chr7 5392001 5403000 0 0 Deletion 10999 OsKitaake07g065500 RH52B_ORYSJ DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp. japonica GN=PL10B PE=2 SV FN904-S Chr7 5392001 5403000 0 0 Deletion 10999 OsKitaake07g065700 Q7XB85_ORYSJ Os07g0202400 protein OS=Oryza sativa subsp. japonica GN=Os07g0202400 PE=2 SV=Length=10 FN904-S Chr7 5392001 5403000 0 0 Deletion 10999 OsKitaake07g065800 YLS8_ARATH Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana GN=YLS8 PE=2 SV=Length=14 FN904-S Chr1 15658704 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN904-S Chr1 16941073 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN904-S Chr1 41674744 T-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN904-S Chr1 41915611 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN904-S Chr2 6166629 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Homo FN904-S Chr2 10605766 C-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN904-S Chr3 12286329 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN904-S Chr3 12672932 T-A 0 0 Single Base Substitution 0 INTRON Hetero FN904-S Chr3 13240363 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN904-S Chr3 13606413 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN904-S Chr4 12583701 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN904-S Chr4 23558870 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME Homo FN904-S Chr4 28934951 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN904-S Chr5 13919227 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN904-S Chr5 16354074 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN904-S Chr5 25236704 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN904-S Chr5 28955057 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake05g273100 IF2C_ARATH Translation initiation factor IF-2, chloroplastic OS=Arabidopsis thaliana GN=At1g17220 PE FN904-S Chr6 2586580 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN904-S Chr6 7184398 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN904-S Chr6 12367265 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN904-S Chr7 527011 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN904-S Chr7 25890053 T-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN904-S Chr8 11394631 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN904-S Chr8 25271376 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN904-S Chr9 369336 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN904-S Chr10 9156620 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN904-S Chr10 16024751 G-A 0 0 Single Base Substitution 0 INTRON Homo FN904-S Chr10 16024768 A-T 0 0 Single Base Substitution 0 SPLICE_SITE_ACCEPTOR Homo OsKitaake10g106200 Q109N3_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os10g29514 PE=4 SV=Length=26 FN904-S Chr11 1987132 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN904-S Chr11 7056397 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN904-S Chr11 15939031 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME Homo FN904-S Chr11 19427547 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN904-S Chr12 5841236 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN904-S Chr12 11933429 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero