FN939-S Chr2 19115359 19115365 0 0 Deletion 6 INTRON Hetero FN939-S Chr4 20700245 20700248 0 0 Deletion 3 INTERGENIC Hetero FN939-S Chr4 28300669 28300670 0 0 Deletion 1 FRAME_SHIFT Homo OsKitaake04g210700 COBL7_ORYSJ COBRA-like protein 7 OS=Oryza sativa subsp. japonica GN=BC1LP1 PE=3 SV=Length=43 FN939-S Chr5 10760257 10760258 0 0 Deletion 1 INTERGENIC Homo FN939-S Chr7 15149015 15149024 0 0 Deletion 9 INTRON Hetero FN939-S Chr7 18726882 18726883 0 0 Deletion 1 INTERGENIC Homo FN939-S Chr9 14589343 14589345 0 0 Deletion 2 INTERGENIC Hetero FN939-S Chr11 19639404 19639406 0 0 Deletion 2 FRAME_SHIFT Homo OsKitaake11g153200 RBR2_ORYSJ Retinoblastoma-related protein 2 OS=Oryza sativa subsp. japonica GN=RBR2 PE=2 SV=Length=9 FN939-S Chr11 26187753 26187758 0 0 Deletion 5 INTERGENIC Hetero FN939-S Chr12 7314524 7314525 0 0 Deletion 1 INTERGENIC Homo FN939-S Chr4 26151787 26151787 0 0 Insertion 2 INTERGENIC Hetero FN939-S Chr7 8412332 8412332 0 0 Insertion 3 CODON_INSERTION Hetero OsKitaake07g091200 CESA6_ORYSJ Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. j FN939-S Chr8 28306535 28306535 0 0 Insertion 2 INTERGENIC Hetero FN939-S Chr9 20216932 20216932 0 0 Insertion 2 INTERGENIC Hetero FN939-S Chr8 4149445 4149446 0 0 Deletion 1 Hetero 0 FN939-S Chr9 16912451 16912520 0 0 Deletion 69 Hetero 0 FN939-S Chr4 9496147 9496147 0 0 Insertion 1 Hetero 0 FN939-S Chr1 23499951 23786668 0 0 Inversion 0 Hetero OsKitaake01g225300 LOG_ORYSJ Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG OS=Oryza sativa subsp. japoni FN939-S Chr1 23499951 23786668 0 0 Inversion 0 Hetero OsKitaake01g228200 MARD1_ARATH Protein MARD1 OS=Arabidopsis thaliana GN=MARD1 PE=2 SV=Length=26 FN939-S Chr3 3627771 3658368 0 0 Inversion 0 Hetero OsKitaake03g051600 VA726_ARATH Putative vesicle-associated membrane protein 726 OS=Arabidopsis thaliana GN=VAMP726 PE=2 FN939-S Chr3 15989423 16001718 0 0 Inversion 0 Hetero OsKitaake03g204600 SCP51_ARATH Serine carboxypeptidase-like 51 OS=Arabidopsis thaliana GN=SCPL51 PE=2 SV=Length=46 FN939-S Chr3 15989436 16001719 0 0 Inversion 0 Hetero OsKitaake03g204600 SCP51_ARATH Serine carboxypeptidase-like 51 OS=Arabidopsis thaliana GN=SCPL51 PE=2 SV=Length=46 FN939-S Chr3 3627858 3665422 0 0 Inversion 0 Hetero FN939-S Chr1 6466954 C-T 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN939-S Chr1 13973164 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN939-S Chr1 14506326 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN939-S Chr1 20183349 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN939-S Chr1 26609187 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN939-S Chr1 43389222 A-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN939-S Chr2 4666540 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero FN939-S Chr2 29533878 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN939-S Chr3 4473335 T-A 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN939-S Chr3 12194360 T-A 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero FN939-S Chr3 12828694 C-T 0 0 Single Base Substitution 0 INTRON Homo FN939-S Chr3 16602286 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN939-S Chr3 16602288 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN939-S Chr3 28032265 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN939-S Chr3 30431951 C-T 0 0 Single Base Substitution 0 INTRON Hetero FN939-S Chr3 31938131 G-T 0 0 Single Base Substitution 0 INTRON Hetero FN939-S Chr3 31938133 C-A 0 0 Single Base Substitution 0 INTRON Hetero FN939-S Chr3 31938135 A-T 0 0 Single Base Substitution 0 INTRON Hetero FN939-S Chr4 6463659 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN939-S Chr4 14233661 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN939-S Chr5 4092436 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero FN939-S Chr5 16929751 T-A 0 0 Single Base Substitution 0 UTR_3_PRIME Homo FN939-S Chr5 17885678 C-A 0 0 Single Base Substitution 0 INTRON Hetero FN939-S Chr6 15245900 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN939-S Chr6 26288564 T-A 0 0 Single Base Substitution 0 INTRON Hetero FN939-S Chr7 2624278 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN939-S Chr7 4307215 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN939-S Chr7 10730116 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN939-S Chr7 20431764 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN939-S Chr8 1315154 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN939-S Chr9 334046 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero FN939-S Chr9 13346728 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN939-S Chr9 13346734 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero FN939-S Chr10 678710 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN939-S Chr10 11027009 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN939-S Chr10 16730767 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake10g114100 MOSA_MAIZE Autonomous transposable element EN-1 mosaic protein OS=Zea mays PE=2 SV=Length=62 FN939-S Chr10 23276262 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake10g197100 CAO_ORYSJ Chlorophyllide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica GN=CAO PE=2 SV=L FN939-S Chr11 4926840 G-C 0 0 Single Base Substitution 0 INTERGENIC Hetero FN939-S Chr11 17538191 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN939-S Chr11 17538192 C-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN939-S Chr11 24840315 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN939-S Chr11 24843157 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN939-S Chr11 27248342 C-T 0 0 Single Base Substitution 0 INTRON Homo FN939-S Chr12 25396914 T-A 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero