W42-1-3S-1 Chr1 86346 86347 0 0 Deletion 1 INTERGENIC Homo W42-1-3S-1 Chr1 19191946 19191956 0 0 Deletion 10 UTR_3_PRIME Hetero W42-1-3S-1 Chr1 27049954 27049956 0 0 Deletion 2 INTERGENIC Homo W42-1-3S-1 Chr2 7149372 7149379 0 0 Deletion 7 INTERGENIC Homo W42-1-3S-1 Chr3 223825 223828 0 0 Deletion 3 INTERGENIC Homo W42-1-3S-1 Chr3 3767323 3767331 0 0 Deletion 8 UTR_5_PRIME Hetero W42-1-3S-1 Chr3 28188051 28188053 0 0 Deletion 2 INTRON Homo W42-1-3S-1 Chr4 10840053 10840056 0 0 Deletion 3 INTERGENIC Hetero W42-1-3S-1 Chr4 10906588 10906597 0 0 Deletion 9 INTERGENIC Homo W42-1-3S-1 Chr4 22751866 22751880 0 0 Deletion 14 INTERGENIC Hetero W42-1-3S-1 Chr4 35265715 35265722 0 0 Deletion 7 INTRON Homo W42-1-3S-1 Chr7 3110310 3110321 0 0 Deletion 11 INTERGENIC Hetero W42-1-3S-1 Chr7 13068611 13068612 0 0 Deletion 1 INTERGENIC Homo W42-1-3S-1 Chr7 13486961 13486964 0 0 Deletion 3 INTERGENIC Hetero W42-1-3S-1 Chr7 20298353 20298370 0 0 Deletion 17 INTERGENIC Hetero W42-1-3S-1 Chr8 6544285 6544289 0 0 Deletion 4 INTERGENIC Hetero W42-1-3S-1 Chr8 6613752 6613753 0 0 Deletion 1 INTERGENIC Homo W42-1-3S-1 Chr10 8121320 8121332 0 0 Deletion 12 INTERGENIC Homo W42-1-3S-1 Chr12 10930682 10930683 0 0 Deletion 1 INTERGENIC Homo W42-1-3S-1 Chr11 4873547 4873547 0 0 Insertion 2 INTERGENIC Hetero W42-1-3S-1 Chr2 37072073 37072075 0 0 Deletion 2 Hetero OsKitaake02g398400 CHX15_ARATH Cation/H(+) antiporter 15 OS=Arabidopsis thaliana GN=CHX15 PE=2 SV=Length=82 W42-1-3S-1 Chr3 22065138 22065140 0 0 Deletion 2 Hetero 0 W42-1-3S-1 Chr2 13865666 13865666 0 0 Insertion 2 Hetero 0 W42-1-3S-1 Chr6 6082 6082 0 0 Insertion 1 Hetero 0 W42-1-3S-1 Chr6 16020336 16020336 0 0 Insertion 1 Hetero OsKitaake06g154000 MSRB1_ORYSJ Peptide methionine sulfoxide reductase B1, chloroplastic OS=Oryza sativa subsp. japonica W42-1-3S-1 Chr5 9238910 Chr1 29437639 0 Translocation 0 Homo OsKitaake05g086300 Q5W700_ORYSJ Os05g0245700 protein OS=Oryza sativa subsp. japonica GN=Os05g0245700 PE=4 SV=Length=7 W42-1-3S-1 Chr5 9238911 Chr4 29975017 0 Translocation 0 Homo OsKitaake05g086300 Q5W700_ORYSJ Os05g0245700 protein OS=Oryza sativa subsp. japonica GN=Os05g0245700 PE=4 SV=Length=7 W42-1-3S-1 Chr3 3475966 4103010 0 0 Inversion 0 Homo OsKitaake03g048400 H2AV1_ORYSJ Probable histone H2A variant 1 OS=Oryza sativa subsp. japonica GN=Os03g0162200 PE=2 SV=L W42-1-3S-1 Chr3 3475974 4103020 0 0 Inversion 0 Homo OsKitaake03g048400 H2AV1_ORYSJ Probable histone H2A variant 1 OS=Oryza sativa subsp. japonica GN=Os03g0162200 PE=2 SV=L W42-1-3S-1 Chr3 3475966 4103010 0 0 Inversion 0 Homo OsKitaake03g058100 Q10R20_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=Os03g0174200 PE=2 SV=Length=39 W42-1-3S-1 Chr3 3475974 4103020 0 0 Inversion 0 Homo OsKitaake03g058100 Q10R20_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=Os03g0174200 PE=2 SV=Length=39 W42-1-3S-1 Chr9 16055421 16144148 0 0 Inversion 0 Homo OsKitaake09g115900 ORYC_ORYSJ Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=Length=36 W42-1-3S-1 Chr9 16055605 16191080 0 0 Inversion 0 Hetero OsKitaake09g116600 FDL1_ARATH F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana GN=At1g13570 PE=2 SV=Lengt W42-1-3S-1 Chr4 29980001 29988000 0 0 Deletion 7999 W42-1-3S-1 Chr11 21177001 21247000 0 0 Deletion 69999 OsKitaake11g167700 FLS2_ARATH LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE W42-1-3S-1 Chr11 21177001 21247000 0 0 Deletion 69999 OsKitaake11g167800 XA21_ORYSI Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica GN=XA21 PE=1 SV=Length=10 W42-1-3S-1 Chr11 21177001 21247000 0 0 Deletion 69999 OsKitaake11g167900 Q2R2K1_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os11g35540 PE=2 SV=Length=14 W42-1-3S-1 Chr11 21177001 21247000 0 0 Deletion 69999 OsKitaake11g168000 A0A0N7KST4_ORYSJ Os11g0305600 protein OS=Oryza sativa subsp. japonica GN=Os11g0305600 PE=4 SV=Length W42-1-3S-1 Chr11 21177001 21247000 0 0 Deletion 69999 OsKitaake11g167900 Q2R2K1_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os11g35540 PE=2 SV=Length=14 W42-1-3S-1 Chr11 21177001 21247000 0 0 Deletion 69999 OsKitaake11g168100 FLS2_ARATH LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE W42-1-3S-1 Chr11 21177001 21247000 0 0 Deletion 69999 OsKitaake11g168200 RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=Length=92 W42-1-3S-1 Chr1 13183017 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero W42-1-3S-1 Chr1 23513460 T-G 0 0 Single Base Substitution 0 INTERGENIC Homo W42-1-3S-1 Chr1 31301656 T-C 0 0 Single Base Substitution 0 INTERGENIC Homo W42-1-3S-1 Chr2 2118048 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME Homo W42-1-3S-1 Chr2 6513301 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo W42-1-3S-1 Chr2 14225084 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero W42-1-3S-1 Chr2 14341640 A-G 0 0 Single Base Substitution 0 INTERGENIC Hetero W42-1-3S-1 Chr2 21211533 G-A 0 0 Single Base Substitution 0 INTERGENIC Hetero W42-1-3S-1 Chr2 31220720 G-C 0 0 Single Base Substitution 0 INTERGENIC Hetero W42-1-3S-1 Chr2 35219592 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero W42-1-3S-1 Chr3 3939744 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo W42-1-3S-1 Chr3 3939747 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo W42-1-3S-1 Chr3 11610158 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo W42-1-3S-1 Chr3 19321348 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo W42-1-3S-1 Chr4 7283578 A-C 0 0 Single Base Substitution 0 INTERGENIC Homo W42-1-3S-1 Chr4 14307784 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero W42-1-3S-1 Chr4 14619403 G-C 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero W42-1-3S-1 Chr4 14908611 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo W42-1-3S-1 Chr4 17095422 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Hetero W42-1-3S-1 Chr4 18046350 C-G 0 0 Single Base Substitution 0 INTERGENIC Hetero W42-1-3S-1 Chr4 20820810 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero W42-1-3S-1 Chr4 27221029 T-G 0 0 Single Base Substitution 0 INTERGENIC Hetero W42-1-3S-1 Chr4 34913357 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake04g292100 FPPS2_PARAR Farnesyl pyrophosphate synthase 2 OS=Parthenium argentatum GN=FPS2 PE=2 SV=Length=34 W42-1-3S-1 Chr5 2219375 A-G 0 0 Single Base Substitution 0 UTR_3_PRIME Homo W42-1-3S-1 Chr5 20041282 T-A 0 0 Single Base Substitution 0 SPLICE_SITE_REGION Homo W42-1-3S-1 Chr5 26461528 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero W42-1-3S-1 Chr5 27217864 C-T 0 0 Single Base Substitution 0 UTR_5_PRIME Hetero W42-1-3S-1 Chr6 7531143 G-T 0 0 Single Base Substitution 0 INTERGENIC Hetero W42-1-3S-1 Chr6 10372725 T-G 0 0 Single Base Substitution 0 INTRON Hetero W42-1-3S-1 Chr7 182681 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero W42-1-3S-1 Chr7 1381190 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo OsKitaake07g019700 EIF3C_MEDTR Eukaryotic translation initiation factor 3 subunit C OS=Medicago truncatula GN=TIF3C1 PE W42-1-3S-1 Chr7 4300287 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Hetero OsKitaake07g054000 DNM1B_ORYSJ DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B PE=2 SV=L W42-1-3S-1 Chr7 9331023 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo W42-1-3S-1 Chr8 3003959 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo W42-1-3S-1 Chr8 8581098 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo W42-1-3S-1 Chr8 14850231 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo W42-1-3S-1 Chr8 22964920 G-C 0 0 Single Base Substitution 0 UTR_3_PRIME Hetero W42-1-3S-1 Chr9 22316910 A-T 0 0 Single Base Substitution 0 INTERGENIC Hetero W42-1-3S-1 Chr10 142921 C-T 0 0 Single Base Substitution 0 INTERGENIC Homo W42-1-3S-1 Chr10 12307395 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo W42-1-3S-1 Chr10 15761734 T-A 0 0 Single Base Substitution 0 INTERGENIC Hetero W42-1-3S-1 Chr10 16388793 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo W42-1-3S-1 Chr11 26034811 A-C 0 0 Single Base Substitution 0 INTRON Homo W42-1-3S-1 Chr11 26061432 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo OsKitaake11g210500 A0A0E0RBD2_ORYRU Uncharacterized protein OS=Oryza rufipogon PE=4 SV=Length=72 W42-1-3S-1 Chr12 6458879 C-T 0 0 Single Base Substitution 0 INTERGENIC Hetero W42-1-3S-1 Chr12 11115886 A-G 0 0 Single Base Substitution 0 INTERGENIC Homo