CW-631-3-1 Chr1 27027854 27027856 0 0 Deletion 2 CW-631-3-1 Chr1 27073981 27073983 0 0 Deletion 2 CW-631-3-1 Chr1 33418980 33418986 0 0 Deletion 6 LOC_Os01g57780 retrotransposon protein, putative, unclassified, expressed CW-631-3-1 Chr1 35563753 G-C 0 0 Single Base Substitution 0 INTERGENIC HET CW-631-3-1 Chr1 35982104 35982555 0 0 Deletion 451 CW-631-3-1 Chr1 7694893 7694896 0 0 Deletion 3 CW-631-3-1 Chr1 835024 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g02540 retrotransposon protein, putative, unclassified, expressed CW-631-3-1 Chr10 10126978 A-G 0 0 Single Base Substitution 0 INTRON HET CW-631-3-1 Chr10 11646694 14742428 0 0 Inversion 3095734 LOC_Os10g28330 ZOS10-04 - C2H2 zinc finger protein, expressed CW-631-3-1 Chr10 21972148 21972156 0 0 Deletion 8 CW-631-3-1 Chr10 2384055 2384071 0 0 Deletion 16 CW-631-3-1 Chr10 9372033 9372040 0 0 Deletion 7 LOC_Os10g18440 retrotransposon protein, putative, unclassified, expressed CW-631-3-1 Chr11 19997450 19997453 0 0 Deletion 3 CW-631-3-1 Chr11 22043088 22043089 0 0 Deletion 1 LOC_Os11g37330 pentatricopeptide repeat domain containing protein, putative, expressed CW-631-3-1 Chr11 4616114 A-G 0 0 Single Base Substitution 0 INTRON HET CW-631-3-1 Chr12 21099614 A-T 0 0 Single Base Substitution 0 INTERGENIC HET CW-631-3-1 Chr12 2293011 G-A 0 0 Single Base Substitution 0 INTERGENIC HET CW-631-3-1 Chr12 26244838 G-T 0 0 Single Base Substitution 0 INTERGENIC HET CW-631-3-1 Chr12 4266649 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO CW-631-3-1 Chr2 15706974 G-A 0 0 Single Base Substitution 0 INTRON HOMO CW-631-3-1 Chr2 15706975 G-T 0 0 Single Base Substitution 0 INTRON HOMO CW-631-3-1 Chr2 28211932 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO CW-631-3-1 Chr2 28309002 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO CW-631-3-1 Chr2 31148113 31148113 0 0 Insertion 1 CW-631-3-1 Chr2 34291247 34291555 0 0 Tandem-Duplication 308 CW-631-3-1 Chr3 17648050 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO CW-631-3-1 Chr3 18995145 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO CW-631-3-1 Chr3 21479777 A-G 0 0 Single Base Substitution 0 INTRON HET CW-631-3-1 Chr4 11957279 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g21210 retrotransposon protein, putative, Ty3-gypsy subclass, expressed CW-631-3-1 Chr4 13953705 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g24350 retrotransposon protein, putative, Ty1-copia subclass, expressed CW-631-3-1 Chr4 16253117 C-G 0 0 Single Base Substitution 0 INTERGENIC HET CW-631-3-1 Chr4 18506101 18506101 0 0 Insertion 1 CW-631-3-1 Chr4 18850944 Chr1 35982536 0 Translocation 0 CW-631-3-1 Chr4 18850961 Chr1 35982110 0 Translocation 0 CW-631-3-1 Chr4 21799699 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g35780 expressed protein CW-631-3-1 Chr4 22472393 G-A 0 0 Single Base Substitution 0 SPLICE_SITE_DONOR HOMO LOC_Os04g37810 expressed protein CW-631-3-1 Chr4 25671480 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO CW-631-3-1 Chr4 7422988 A-G 0 0 Single Base Substitution 0 INTRON HET CW-631-3-1 Chr5 17005141 G-T 0 0 Single Base Substitution 0 INTERGENIC HET CW-631-3-1 Chr5 17161563 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g29690 retrotransposon protein, putative, unclassified, expressed CW-631-3-1 Chr5 17713036 C-T 0 0 Single Base Substitution 0 INTERGENIC HET CW-631-3-1 Chr5 20566450 C-T 0 0 Single Base Substitution 0 INTERGENIC HET CW-631-3-1 Chr5 20566453 T-A 0 0 Single Base Substitution 0 INTERGENIC HET CW-631-3-1 Chr5 21345576 C-T 0 0 Single Base Substitution 0 INTERGENIC HET CW-631-3-1 Chr5 2617229 2617231 0 0 Deletion 2 LOC_Os05g05310 Fibronectin type III domain containing protein, expressed CW-631-3-1 Chr5 26447541 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g45630 retrotransposon protein, putative, Ty3-gypsy subclass CW-631-3-1 Chr5 27162788 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g46940 expressed protein CW-631-3-1 Chr5 27532070 27532071 0 0 Deletion 1 CW-631-3-1 Chr5 2805418 T-A 0 0 Single Base Substitution 0 INTERGENIC HET CW-631-3-1 Chr5 5273020 C-T 0 0 Single Base Substitution 0 INTERGENIC HET CW-631-3-1 Chr5 6074417 6074417 0 0 Insertion 2 CW-631-3-1 Chr6 10776825 Chr4 20488252 0 Translocation 0 CW-631-3-1 Chr6 10777922 Chr4 20488273 0 Translocation 0 CW-631-3-1 Chr6 121978 G-A 0 0 Single Base Substitution 0 INTRON HET CW-631-3-1 Chr6 14114426 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO CW-631-3-1 Chr6 23186122 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET CW-631-3-1 Chr6 26383494 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO CW-631-3-1 Chr6 4099960 T-C 0 0 Single Base Substitution 0 INTRON HET CW-631-3-1 Chr7 222140 252470 0 0 Deletion 30330 LOC_Os07g01350 retrotransposon protein, putative, unclassified, expressed CW-631-3-1 Chr7 222140 252470 0 0 Deletion 30330 LOC_Os07g01360 retrotransposon protein, putative, unclassified, expressed CW-631-3-1 Chr7 222140 252470 0 0 Deletion 30330 LOC_Os07g01370 peroxidase precursor, putative, expressed CW-631-3-1 Chr7 222140 252470 0 0 Deletion 30330 LOC_Os07g01380 peroxidase precursor, putative, expressed CW-631-3-1 Chr7 222140 252470 0 0 Deletion 30330 LOC_Os07g01390 transposon protein, putative, CACTA, En/Spm sub-class, expressed CW-631-3-1 Chr7 22685770 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO CW-631-3-1 Chr7 24005781 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO CW-631-3-1 Chr7 28242704 28242709 0 0 Deletion 5 CW-631-3-1 Chr7 5676264 5676264 0 0 Insertion 1 CW-631-3-1 Chr7 9947197 G-C 0 0 Single Base Substitution 0 INTRON HET CW-631-3-1 Chr8 1121312 T-C 0 0 Single Base Substitution 0 UTR_3_PRIME HET CW-631-3-1 Chr8 11601768 Chr4 61838 0 Translocation 0 CW-631-3-1 Chr8 15509767 C-T 0 0 Single Base Substitution 0 INTERGENIC HET CW-631-3-1 Chr8 21225957 21225961 0 0 Deletion 4 CW-631-3-1 Chr8 23859495 23859497 0 0 Deletion 2 CW-631-3-1 Chr8 3015480 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g05640 DUF1336 domain containing protein, expressed CW-631-3-1 Chr9 4830074 5247232 0 0 Inversion 417158 LOC_Os09g09700 retrotransposon protein, putative, Ty3-gypsy subclass, expressed CW-631-3-1 Chr9 5247231 7081975 0 0 Inversion 1834744 LOC_Os09g09700 retrotransposon protein, putative, Ty3-gypsy subclass, expressed CW-631-3-1 Chr9 5249895 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO CW-631-3-1 Chr9 5996797 5996797 0 0 Insertion 1