FN-160 Chr1 17533809 17533810 0 0 Deletion 1 LOC_Os01g32020 retrotransposon, putative, centromere-specific, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38070 retrotransposon protein, putative, unclassified FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38090 expressed protein FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38100 expressed protein FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38110 cytochrome P450, putative, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38120 plant protein of unknown function domain containing protein, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38130 expressed protein FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38140 retrotransposon protein, putative, unclassified, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38150 retrotransposon protein, putative, unclassified, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38160 retrotransposon protein, putative, unclassified, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38170 retrotransposon protein, putative, unclassified, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38180 peptidyl-prolyl isomerase, putative, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38190 plant protein of unknown function domain containing protein, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38200 expressed protein FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38229 peptidyl-prolyl isomerase, putative, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38244 expressed protein FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38270 retrotransposon protein, putative, Ty3-gypsy subclass FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38280 retrotransposon protein, putative, unclassified, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38290 retrotransposon protein, putative, unclassified FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38300 retrotransposon protein, putative, unclassified, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38310 expressed protein FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38320 retrotransposon protein, putative, unclassified, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38340 retrotransposon protein, putative, unclassified, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38359 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38380 plant protein of unknown function domain containing protein, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38390 expressed protein FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38420 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38430 plant protein of unknown function domain containing protein, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38440 transposon protein, putative, unclassified, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38450 hypothetical protein FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38460 retrotransposon protein, putative, unclassified, expressed FN-160 Chr1 21328001 21627000 0 0 Deletion 299000 LOC_Os01g38480 GA18326-PA, putative, expressed FN-160 Chr1 36862097 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-160 Chr1 4130793 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-160 Chr1 42561632 42561633 0 0 Deletion 1 FN-160 Chr10 12373116 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g24150 zinc knuckle family protein, expressed FN-160 Chr10 14663738 14663739 0 0 Deletion 1 FN-160 Chr10 14807631 14965542 0 0 Inversion 157911 FN-160 Chr10 15824395 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-160 Chr10 21903280 21903283 0 0 Deletion 3 FN-160 Chr11 11423503 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN-160 Chr11 14492187 14492190 0 0 Deletion 3 FN-160 Chr11 5693427 5693428 0 0 Deletion 1 FN-160 Chr11 747458 747469 0 0 Deletion 11 LOC_Os11g02464 vacuolar-sorting receptor precursor, putative, expressed FN-160 Chr11 799346 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-160 Chr11 9812307 9812307 0 0 Insertion 2 FN-160 Chr12 13167244 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-160 Chr12 23711979 23711991 0 0 Deletion 12 FN-160 Chr12 9900328 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g17290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-160 Chr2 13813151 13813157 0 0 Deletion 6 FN-160 Chr2 2213354 A-T 0 0 Single Base Substitution 0 INTRON HOMO FN-160 Chr2 24162637 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN-160 Chr2 7153420 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-160 Chr3 2050856 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-160 Chr3 26374899 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g46590 transposon protein, putative, unclassified, expressed FN-160 Chr4 1636523 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-160 Chr4 17676636 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-160 Chr4 23573629 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-160 Chr4 25879995 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-160 Chr4 33387303 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g56060 protein kinase domain containing protein, expressed FN-160 Chr5 23622262 23622267 0 0 Deletion 5 FN-160 Chr5 5637477 5637477 0 0 Insertion 2 FN-160 Chr5 5704738 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-160 Chr5 8854001 8917000 0 0 Deletion 63000 LOC_Os05g15660 retrotransposon protein, putative, unclassified, expressed FN-160 Chr5 8854001 8917000 0 0 Deletion 63000 LOC_Os05g15670 expressed protein FN-160 Chr5 8854001 8917000 0 0 Deletion 63000 LOC_Os05g15680 expressed protein FN-160 Chr5 8854001 8917000 0 0 Deletion 63000 LOC_Os05g15690 expansin precursor, putative, expressed FN-160 Chr5 8854001 8917000 0 0 Deletion 63000 LOC_Os05g15700 expressed protein FN-160 Chr5 8854001 8917000 0 0 Deletion 63000 LOC_Os05g15710 hypothetical protein FN-160 Chr5 8854001 8917000 0 0 Deletion 63000 LOC_Os05g15720 expressed protein FN-160 Chr5 8854001 8917000 0 0 Deletion 63000 LOC_Os05g15730 retrotransposon, putative, centromere-specific, expressed FN-160 Chr5 8854001 8917000 0 0 Deletion 63000 LOC_Os05g15740 expressed protein FN-160 Chr5 8854001 8917000 0 0 Deletion 63000 LOC_Os05g15750 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-160 Chr5 8854001 8917000 0 0 Deletion 63000 LOC_Os05g15760 retrotransposon protein, putative, unclassified FN-160 Chr5 8854001 8917000 0 0 Deletion 63000 LOC_Os05g15770 glycosyl hydrolase, putative, expressed FN-160 Chr5 8854001 8917000 0 0 Deletion 63000 LOC_Os05g15780 hypothetical protein FN-160 Chr5 8854001 8917000 0 0 Deletion 63000 LOC_Os05g15790 expressed protein FN-160 Chr5 8948503 9920238 0 0 Inversion 971735 LOC_Os05g15850 glycosyl hydrolase, putative, expressed FN-160 Chr6 11489485 11489486 0 0 Deletion 1 FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29060 retrotransposon protein, putative, unclassified, expressed FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29070 retrotransposon protein, putative, unclassified FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29080 expressed protein FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29100 expressed protein FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29110 MLO domain containing protein, putative, expressed FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29120 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29130 retrotransposon protein, putative, unclassified, expressed FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29140 retrotransposon protein, putative, unclassified, expressed FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29150 retrotransposon protein, putative, unclassified, expressed FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29160 retrotransposon protein, putative, unclassified, expressed FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29170 retrotransposon protein, putative, unclassified, expressed FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29180 erythronate-4-phosphate dehydrogenase domain containing protein, expressed FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29190 expressed protein FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29210 retrotransposon protein, putative, unclassified, expressed FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29220 erythronate-4-phosphate dehydrogenase domain containing protein, expressed FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29230 expressed protein FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29240 expressed protein FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29250 expressed protein FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29260 retrotransposon protein, putative, unclassified, expressed FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29270 retrotransposon protein, putative, unclassified, expressed FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29280 retrotransposon protein, putative, unclassified FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29290 pentatricopeptide, putative, expressed FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29300 retrotransposon protein, putative, Ty1-copia subclass, expressed FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29310 ulp1 protease family protein, putative, expressed FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29320 retrotransposon protein, putative, unclassified, expressed FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29330 retrotransposon protein, putative, unclassified FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29340 retrotransposon protein, putative, unclassified, expressed FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29350 myosin, putative, expressed FN-160 Chr6 16566001 16787000 0 0 Deletion 221000 LOC_Os06g29360 expressed protein FN-160 Chr6 358236 358239 0 0 Deletion 3 FN-160 Chr6 3651661 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-160 Chr6 5455484 5455486 0 0 Deletion 2 FN-160 Chr7 20420896 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os07g34140 chalcone synthase, putative, expressed FN-160 Chr7 21416340 21416340 0 0 Insertion 1 FN-160 Chr7 27995645 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-160 Chr8 12858374 12858377 0 0 Deletion 3 FN-160 Chr8 19649931 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-160 Chr8 9352684 9352685 0 0 Deletion 1 FN-160 Chr9 12475124 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-160 Chr9 13872068 13872068 0 0 Insertion 1 FN-160 Chr9 18913044 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-160 Chr9 19167831 T-C 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN-160 Chr9 19954171 19954177 0 0 Deletion 6