FN-162 Chr1 21986547 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-162 Chr10 5202116 T-A 0 0 Single Base Substitution 0 INTRON HET FN-162 Chr11 16233686 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g28230 retrotransposon protein, putative, unclassified, expressed FN-162 Chr11 16464038 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-162 Chr11 16762423 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g28970 retrotransposon protein, putative, unclassified FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15280 TNP1, putative, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15290 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15300 SAM dependent carboxyl methyltransferase, putative, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15310 methyltransferase, putative, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15320 expressed protein FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15340 SAM dependent carboxyl methyltransferase family protein, putative, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15350 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15360 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15370 sulfotransferase domain containing protein, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15390 hypothetical protein FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15400 retrotransposon protein, putative, Ty1-copia subclass, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15410 S-adenosyl-L-methionine:benzoic acid/salicylic acid carboxyl methyltransferase, putative, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15420 expressed protein FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15430 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15440 retrotransposon protein, putative, unclassified, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15450 retrotransposon protein, putative, unclassified FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15460 expressed protein FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15470 expressed protein FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15480 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15490 expressed protein FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15500 stripe rust resistance protein Yr10, putative, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15510 expressed protein FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15520 OsSub62 - Putative Subtilisin homologue, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15530 conserved hypothetical protein FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15540 hypothetical protein FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15550 retrotransposon protein, putative, Ty3-gypsy subclass FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15570 Ser/Thr protein phosphatase family protein, putative, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15580 hypothetical protein FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15590 expressed protein FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15600 hypothetical protein FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15610 hypothetical protein FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15620 OsFBX420 - F-box domain containing protein, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15624 expressed protein FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15630 retrotransposon protein, putative, unclassified, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15640 expressed protein FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15660 hypothetical protein FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15670 NBS-LRR disease resistance protein, putative, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15680 retrotransposon protein, putative, Ty3-gypsy subclass FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15690 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15700 NB-ARC domain containing protein, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15710 hypothetical protein FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15720 expressed protein FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15730 hypothetical protein FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15740 hypothetical protein FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15750 retrotransposon protein, putative, unclassified, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g15755 transposon protein, putative, unclassified, expressed FN-162 Chr11 8616001 8930000 0 0 Deletion 314000 LOC_Os11g16246 retrotransposon protein, putative, unclassified FN-162 Chr12 10468375 10468384 0 0 Deletion 9 LOC_Os12g18150 ZOS12-04 - C2H2 zinc finger protein, expressed FN-162 Chr12 14691080 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-162 Chr12 15188931 15188932 0 0 Deletion 1 FN-162 Chr12 17035098 T-A 0 0 Single Base Substitution 0 INTRON HET FN-162 Chr12 17035099 G-T 0 0 Single Base Substitution 0 INTRON HET FN-162 Chr12 17949163 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-162 Chr12 19804315 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-162 Chr12 21739452 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g35720 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-162 Chr12 23898820 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-162 Chr12 3052894 A-C 0 0 Single Base Substitution 0 INTRON HET FN-162 Chr12 7417691 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-162 Chr2 21975764 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-162 Chr3 16156054 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-162 Chr3 18498853 18498855 0 0 Deletion 2 FN-162 Chr3 1980739 2159848 0 0 Inversion 179109 LOC_Os03g04620 CCT motif family protein, expressed FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04620 CCT motif family protein, expressed FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04630 cytochrome P450 protein, putative, expressed FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04640 cytochrome P450 protein, putative, expressed FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04650 cytochrome P450 protein, putative, expressed FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04660 cytochrome P450 86A1, putative, expressed FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04670 expressed protein FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04680 cytochrome P450, putative, expressed FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04690 expressed protein FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04700 retrotransposon, putative, centromere-specific, expressed FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04710 expressed protein FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04720 retrotransposon protein, putative, unclassified, expressed FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04740 expressed protein FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04750 60S ribosomal protein L21-2, putative, expressed FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04760 expressed protein FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04770 beta-amylase, putative, expressed FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04780 RNA recognition motif containing protein, putative, expressed FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04790 retrotransposon protein, putative, unclassified, expressed FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04800 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04820 expressed protein FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04830 expressed protein FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04840 expressed protein FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04850 expressed protein FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04860 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04870 expressed protein FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04890 zinc finger family protein, putative, expressed FN-162 Chr3 2160001 2355000 0 0 Deletion 195000 LOC_Os03g04900 MYB family transcription factor, putative, expressed FN-162 Chr3 24374368 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os03g43610 retrotransposon protein, putative, Ty1-copia subclass, expressed FN-162 Chr3 28122786 A-T 0 0 Single Base Substitution 0 INTRON HET FN-162 Chr3 5925808 A-G 0 0 Single Base Substitution 0 INTRON HET FN-162 Chr3 6506541 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-162 Chr4 13218949 13218950 0 0 Deletion 1 FN-162 Chr4 18043800 18043801 0 0 Deletion 1 LOC_Os04g30240 OsWAK60 - OsWAK receptor-like protein kinase, expressed FN-162 Chr4 24653259 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-162 Chr4 27065923 27065929 0 0 Deletion 6 FN-162 Chr4 28199773 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g47550 expressed protein FN-162 Chr4 28199774 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g47550 expressed protein FN-162 Chr4 342991 342995 0 0 Deletion 4 FN-162 Chr4 34803794 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-162 Chr4 6819455 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN-162 Chr5 12350292 12350299 0 0 Deletion 7 FN-162 Chr5 15032693 17590343 0 0 Inversion 2557650 FN-162 Chr5 15867441 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g27304 peptide transporter PTR2, putative, expressed FN-162 Chr5 17357197 17590339 0 0 Inversion 233142 FN-162 Chr5 4497231 4497240 0 0 Deletion 9 FN-162 Chr5 6515867 6515870 0 0 Deletion 3 FN-162 Chr5 7926073 7926074 0 0 Deletion 1 FN-162 Chr5 8664270 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-162 Chr6 2094578 C-T 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN-162 Chr7 12422921 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-162 Chr7 14389256 G-C 0 0 Single Base Substitution 0 INTRON HET FN-162 Chr7 16637049 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-162 Chr7 19543317 19543343 0 0 Deletion 26 FN-162 Chr7 23995263 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-162 Chr7 24982855 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-162 Chr7 28173836 28173836 0 0 Insertion 1 FN-162 Chr7 9945279 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g16910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-162 Chr8 10561132 10561148 0 0 Deletion 16 FN-162 Chr8 1191630 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN-162 Chr8 8831171 8831182 0 0 Deletion 11 FN-162 Chr8 8832291 8832293 0 0 Deletion 2 FN-162 Chr9 1314546 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN-162 Chr9 15513151 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-162 Chr9 19581297 19581302 0 0 Deletion 5 FN-162 Chr9 7078115 7079070 0 0 Deletion 955 LOC_Os09g12380 no apical meristem protein, putative, expressed FN-162 Chr9 754936 C-T 0 0 Single Base Substitution 0 INTERGENIC HET