FN-169 Chr1 10103281 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN-169 Chr1 1180527 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-169 Chr1 15490895 T-G 0 0 Single Base Substitution 0 INTRON HET FN-169 Chr1 2957533 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os01g06220 gibberellin receptor GID1L2, putative, expressed FN-169 Chr1 29881343 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-169 Chr1 33401530 33401530 0 0 Insertion 2 FN-169 Chr1 34057664 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os01g58920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-169 Chr1 40916356 40916357 0 0 Deletion 1 FN-169 Chr10 1167154 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-169 Chr10 1276121 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g03060 retrotransposon, putative, centromere-specific, expressed FN-169 Chr10 17836969 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-169 Chr10 20356637 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-169 Chr10 20743565 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-169 Chr10 3600495 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-169 Chr10 3792308 3792309 0 0 Deletion 1 FN-169 Chr10 5530573 Chr6 11924763 0 Translocation 0 FN-169 Chr11 10008456 10008463 0 0 Deletion 7 FN-169 Chr11 2188507 2188507 0 0 Insertion 1 FN-169 Chr11 6442030 6442074 0 0 Deletion 44 LOC_Os11g11580 NB-ARC domain containing protein, expressed FN-169 Chr11 7201237 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-169 Chr12 22243062 22243063 0 0 Deletion 1 FN-169 Chr2 10868372 10868373 0 0 Deletion 1 FN-169 Chr2 14940690 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN-169 Chr2 1572795 1574353 0 0 Deletion 1558 LOC_Os02g03750 polygalacturonase, putative, expressed FN-169 Chr2 19794020 19794021 0 0 Deletion 1 LOC_Os02g33320 RNA recognition motif containing protein, putative, expressed FN-169 Chr2 6490377 6490381 0 0 Deletion 4 LOC_Os02g12440 receptor kinase, putative, expressed FN-169 Chr2 8107875 8107885 0 0 Deletion 10 LOC_Os02g14700 expressed protein FN-169 Chr2 9637283 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-169 Chr3 10704768 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g19104 retrotransposon protein, putative, unclassified, expressed FN-169 Chr3 20299332 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-169 Chr3 22081564 22081567 0 0 Deletion 3 FN-169 Chr3 23538166 23538177 0 0 Deletion 11 FN-169 Chr3 24063913 24183912 0 0 Inversion 119999 FN-169 Chr3 29498919 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-169 Chr3 34478278 G-A 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN-169 Chr3 34984648 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN-169 Chr3 35694799 35694800 0 0 Deletion 1 LOC_Os03g63150 powdery mildew resistance protein PM3b, putative, expressed FN-169 Chr3 459719 459719 0 0 Insertion 1 FN-169 Chr4 19614018 C-T 0 0 Single Base Substitution 0 INTRON HET FN-169 Chr4 26872573 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN-169 Chr4 32049011 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-169 Chr4 33924314 33924324 0 0 Deletion 10 FN-169 Chr4 5928583 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-169 Chr4 9967519 9967520 0 0 Deletion 1 LOC_Os04g18040 retrotransposon protein, putative, unclassified FN-169 Chr5 14731482 14731486 0 0 Deletion 4 FN-169 Chr5 21242814 21242815 0 0 Deletion 1 FN-169 Chr5 23038580 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g39290 retrotransposon protein, putative, unclassified, expressed FN-169 Chr5 23255004 23255006 0 0 Deletion 2 LOC_Os05g39610 exo70 exocyst complex subunit domain containing protein, expressed FN-169 Chr5 28282699 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-169 Chr5 6137784 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-169 Chr6 11924182 11924765 0 0 Deletion 583 FN-169 Chr6 1906219 A-G 0 0 Single Base Substitution 0 INTRON HET FN-169 Chr6 20282442 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-169 Chr6 22672325 22672325 0 0 Insertion 3 FN-169 Chr6 24927257 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g41620 retrotransposon protein, putative, unclassified, expressed FN-169 Chr6 27735479 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os06g45840 MYB transcription factor, putative, expressed FN-169 Chr6 4931223 C-T 0 0 Single Base Substitution 0 INTRON HET FN-169 Chr6 5496827 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-169 Chr6 8192846 8192847 0 0 Deletion 1 FN-169 Chr7 11252901 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24590 retrotransposon protein, putative, unclassified, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24600 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24610 retrotransposon protein, putative, Ty3-gypsy subclass FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24620 retrotransposon protein, putative, unclassified, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24630 retrotransposon, putative, centromere-specific FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24640 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24660 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24670 retrotransposon protein, putative, Ty3-gypsy subclass FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24680 retrotransposon protein, putative, unclassified, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24690 retrotransposon protein, putative, unclassified, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24700 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24710 retrotransposon protein, putative, unclassified, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24720 retrotransposon protein, putative, unclassified FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24730 retrotransposon protein, putative, unclassified, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24740 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24750 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24760 retrotransposon protein, putative, Ty3-gypsy subclass FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24770 retrotransposon protein, putative, unclassified, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24780 retrotransposon protein, putative, Ty3-gypsy subclass FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24790 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24800 retrotransposon protein, putative, unclassified, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24810 retrotransposon protein, putative, unclassified, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24820 thionin-like peptide, putative, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24830 thionin-like peptide, putative, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24840 retrotransposon protein, putative, unclassified, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24850 retrotransposon protein, putative, unclassified, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24870 expressed protein FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24880 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24890 expressed protein FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24900 retrotransposon protein, putative, Ty3-gypsy subclass FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24920 transposon protein, putative, unclassified FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24930 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24940 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24950 expressed protein FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24960 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24970 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24980 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-169 Chr7 13990001 14230000 0 0 Deletion 240000 LOC_Os07g24990 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-169 Chr7 14245001 14291000 0 0 Deletion 46000 LOC_Os07g25000 retrotransposon protein, putative, Ty3-gypsy subclass FN-169 Chr7 14245001 14291000 0 0 Deletion 46000 LOC_Os07g25010 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-169 Chr7 14245001 14291000 0 0 Deletion 46000 LOC_Os07g25030 transposon protein, putative, CACTA, En/Spm sub-class FN-169 Chr7 14245001 14291000 0 0 Deletion 46000 LOC_Os07g25040 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-169 Chr7 24980457 24980458 0 0 Deletion 1 FN-169 Chr7 2718496 A-G 0 0 Single Base Substitution 0 INTRON HET FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05700 expressed protein FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05710 expressed protein FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05720 TCP family transcription factor, putative, expressed FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05740 receptor-like protein kinase 2 precursor, putative, expressed FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05750 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05760 expressed protein FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05770 transposon protein, putative, unclassified, expressed FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05780 conserved hypothetical protein FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05790 retrotransposon protein, putative, unclassified, expressed FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05800 glutathione S-transferase, N-terminal domain containing protein, expressed FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05810 glycine-rich protein, putative, expressed FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05820 hydroxyacid oxidase 1, putative, expressed FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05830 zinc-finger protein, putative, expressed FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05840 expressed protein FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05850 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05870 expressed protein FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05880 OsFBK18 - F-box domain and kelch repeat containing protein, expressed FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05890 expressed protein FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05900 ZOS7-02 - C2H2 zinc finger protein, expressed FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05910 expressed protein FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05920 retrotransposon protein, putative, unclassified FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05930 expressed protein FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05940 9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05950 expressed protein FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05960 expressed protein FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05970 ligA, putative, expressed FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g05984 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g06000 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g06010 transposon protein, putative, unclassified FN-169 Chr7 2723001 2917000 0 0 Deletion 194000 LOC_Os07g06020 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-169 Chr7 3373501 Chr2 31920134 0 Translocation 0 LOC_Os02g52140 RNA recognition motif containing protein, putative, expressed FN-169 Chr7 3373501 Chr2 31920134 0 Translocation 0 LOC_Os07g06900 OsFBLD3 - F-box, LRR and FBD domain containing protein, expressed FN-169 Chr7 3373534 Chr2 31807763 0 Translocation 0 LOC_Os02g51930 cytokinin-O-glucosyltransferase 2, putative, expressed FN-169 Chr7 3373534 Chr2 31807763 0 Translocation 0 LOC_Os07g06900 OsFBLD3 - F-box, LRR and FBD domain containing protein, expressed FN-169 Chr7 778740 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-169 Chr8 15748136 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-169 Chr8 19208050 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-169 Chr8 20239438 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN-169 Chr8 28325641 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-169 Chr9 13866239 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-169 Chr9 18154253 18154253 0 0 Insertion 6 FN-169 Chr9 8915585 8915589 0 0 Deletion 4