FN-288 Chr1 12717709 12717709 0 0 Insertion 1 FN-288 Chr1 17482111 17482112 0 0 Deletion 1 FN-288 Chr1 21700157 C-G 0 0 Single Base Substitution 0 INTRON HOMO FN-288 Chr1 27888068 27888072 0 0 Deletion 4 LOC_Os01g48650 expressed protein FN-288 Chr1 3583802 3595138 0 0 Deletion 11336 LOC_Os01g07510 conserved hypothetical protein FN-288 Chr1 3583802 3595138 0 0 Deletion 11336 LOC_Os01g07520 proline-rich family protein, putative, expressed FN-288 Chr10 1454599 1454607 0 0 Deletion 8 FN-288 Chr10 14939875 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-288 Chr10 1496875 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-288 Chr10 18036051 18040061 0 0 Deletion 4010 LOC_Os10g33930 DUF1336 domain containing protein, expressed FN-288 Chr10 1964329 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-288 Chr10 5108743 5108760 0 0 Deletion 17 LOC_Os10g09470 retrotransposon protein, putative, unclassified, expressed FN-288 Chr10 5903637 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-288 Chr10 6340935 A-T 0 0 Single Base Substitution 0 INTRON HET FN-288 Chr10 6340936 A-T 0 0 Single Base Substitution 0 INTRON HET FN-288 Chr10 6340938 C-T 0 0 Single Base Substitution 0 INTRON HET FN-288 Chr10 6347292 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN-288 Chr11 1002062 Chr2 5944607 0 Translocation 0 LOC_Os02g11090 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-288 Chr11 1002062 Chr2 5944607 0 Translocation 0 LOC_Os11g02910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-288 Chr11 1414656 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-288 Chr11 16040093 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-288 Chr11 21168940 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-288 Chr11 7087730 7087730 0 0 Insertion 2 FN-288 Chr11 8836279 8836305 0 0 Deletion 26 FN-288 Chr12 11337078 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-288 Chr12 18201695 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-288 Chr12 19180588 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-288 Chr12 25824844 Chr1 1269276 0 Translocation 0 FN-288 Chr12 25824852 Chr1 1281057 0 Translocation 0 FN-288 Chr12 2596696 C-T 0 0 Single Base Substitution 0 INTRON HET FN-288 Chr12 27333455 27333476 0 0 Deletion 21 FN-288 Chr12 3552594 T-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN-288 Chr12 8977313 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-288 Chr2 12864063 12864063 0 0 Insertion 4 FN-288 Chr2 18745749 18745750 0 0 Deletion 1 FN-288 Chr2 21698244 21860440 0 0 Inversion 162196 LOC_Os02g36220 terpene synthase, putative, expressed FN-288 Chr2 21698267 21860530 0 0 Inversion 162263 LOC_Os02g36220 terpene synthase, putative, expressed FN-288 Chr2 21868229 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g36230 transposon protein, putative, unclassified, expressed FN-288 Chr2 27488567 27488569 0 0 Deletion 2 LOC_Os02g45250 homeobox and START domains containing protein, putative, expressed FN-288 Chr2 27656410 27656417 0 0 Deletion 7 FN-288 Chr2 2791140 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-288 Chr2 29819422 29819425 0 0 Deletion 3 FN-288 Chr3 31077149 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-288 Chr3 459719 459719 0 0 Insertion 1 FN-288 Chr4 11551033 Chr2 17320461 0 Translocation 0 FN-288 Chr4 13051107 13051109 0 0 Deletion 2 LOC_Os04g22990 retrotransposon protein, putative, unclassified, expressed FN-288 Chr4 16781499 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-288 Chr4 22256513 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-288 Chr4 26251100 26251100 0 0 Insertion 1 LOC_Os04g44320 transposon protein, putative, unclassified, expressed FN-288 Chr4 27753065 27753066 0 0 Deletion 1 FN-288 Chr4 368582 368582 0 0 Insertion 4 FN-288 Chr4 7385481 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-288 Chr5 15991599 15991624 0 0 Deletion 25 FN-288 Chr5 2277995 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g04790 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08040 retrotransposon protein, putative, unclassified, expressed FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08050 retrotransposon protein, putative, unclassified, expressed FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08060 expressed protein FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08080 transposon protein, putative, unclassified, expressed FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08090 expressed protein FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08100 DNA replication licensing factor MCM3 homolog 3, putative, expressed FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08110 early light-induced protein, chloroplast precursor, putative, expressed FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08120 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08140 retrotransposon protein, putative, Ty3-gypsy subclass FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08150 retrotransposon protein, putative, unclassified, expressed FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08160 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08170 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08180 retrotransposon protein, putative, unclassified FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08190 retrotransposon protein, putative, unclassified FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08200 retrotransposon protein, putative, unclassified, expressed FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08210 retrotransposon, putative, centromere-specific FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08220 retrotransposon protein, putative, Ty3-gypsy subclass FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08230 expressed protein FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08240 expressed protein FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08250 retrotransposon protein, putative, unclassified, expressed FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08260 retrotransposon protein, putative, unclassified FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08270 retrotransposon protein, putative, unclassified FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08280 retrotransposon protein, putative, unclassified FN-288 Chr5 4347001 4525000 0 0 Deletion 178000 LOC_Os05g08290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-288 Chr5 6126479 18965196 0 0 Inversion 12838717 LOC_Os05g10970 retrotransposon protein, putative, unclassified FN-288 Chr5 6126479 18965196 0 0 Inversion 12838717 LOC_Os05g32470 retrotransposon protein, putative, unclassified FN-288 Chr6 11236786 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-288 Chr6 13772387 13772388 0 0 Deletion 1 LOC_Os06g23610 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-288 Chr6 26298682 26298685 0 0 Deletion 3 FN-288 Chr6 7346237 7346240 0 0 Deletion 3 LOC_Os06g13360 retrotransposon protein, putative, unclassified, expressed FN-288 Chr7 12108498 12108498 0 0 Insertion 3 FN-288 Chr7 19026030 19026032 0 0 Deletion 2 FN-288 Chr7 9342439 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-288 Chr7 9757780 Chr4 3713103 0 Translocation 0 FN-288 Chr8 13312423 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN-288 Chr8 20145118 20145118 0 0 Insertion 9 LOC_Os08g32520 expressed protein FN-288 Chr8 20642112 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-288 Chr8 22937211 22955391 0 0 Deletion 18180 FN-288 Chr8 23621992 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-288 Chr8 26364505 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-288 Chr8 26805875 26805875 0 0 Insertion 4 FN-288 Chr8 3645799 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-288 Chr8 4413697 T-C 0 0 Single Base Substitution 0 INTRON HET FN-288 Chr8 7256437 7256441 0 0 Deletion 4 FN-288 Chr9 16646238 16646247 0 0 Deletion 9 LOC_Os09g27390 transposon protein, putative, unclassified, expressed FN-288 Chr9 4125073 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-288 Chr9 560619 560621 0 0 Deletion 2 LOC_Os09g01810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-288 Chr9 8974005 8974005 0 0 Insertion 2