FN-291 Chr1 10669020 13241709 0 0 Inversion 2572689 LOC_Os01g23580 inorganic H+ pyrophosphatase, putative, expressed FN-291 Chr1 12911491 12911497 0 0 Deletion 6 FN-291 Chr1 12988947 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-291 Chr1 20396361 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-291 Chr1 2092807 2092808 0 0 Deletion 1 FN-291 Chr1 21312172 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-291 Chr1 22199001 22329000 0 0 Deletion 130000 LOC_Os01g39399 expressed protein FN-291 Chr1 22199001 22329000 0 0 Deletion 130000 LOC_Os01g39420 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-291 Chr1 22199001 22329000 0 0 Deletion 130000 LOC_Os01g39430 anthocyanin regulatory protein, putative FN-291 Chr1 22199001 22329000 0 0 Deletion 130000 LOC_Os01g39440 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-291 Chr1 22199001 22329000 0 0 Deletion 130000 LOC_Os01g39450 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-291 Chr1 22199001 22329000 0 0 Deletion 130000 LOC_Os01g39464 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-291 Chr1 22199001 22329000 0 0 Deletion 130000 LOC_Os01g39480 anthocyanin regulatory Lc protein, putative, expressed FN-291 Chr1 22199001 22329000 0 0 Deletion 130000 LOC_Os01g39490 expressed protein FN-291 Chr1 22199001 22329000 0 0 Deletion 130000 LOC_Os01g39500 transposon protein, putative, unclassified FN-291 Chr1 22199001 22329000 0 0 Deletion 130000 LOC_Os01g39510 hypothetical protein FN-291 Chr1 22199001 22329000 0 0 Deletion 130000 LOC_Os01g39520 retrotransposon, putative, centromere-specific, expressed FN-291 Chr1 22199001 22329000 0 0 Deletion 130000 LOC_Os01g39530 retrotransposon, putative, centromere-specific FN-291 Chr1 22199001 22329000 0 0 Deletion 130000 LOC_Os01g39540 retrotransposon, putative, centromere-specific FN-291 Chr1 22199001 22329000 0 0 Deletion 130000 LOC_Os01g39550 retrotransposon protein, putative, Ty1-copia subclass, expressed FN-291 Chr1 22199001 22329000 0 0 Deletion 130000 LOC_Os01g39560 anthocyanin regulatory protein, putative, expressed FN-291 Chr1 22199001 22329000 0 0 Deletion 130000 LOC_Os01g39570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-291 Chr1 22199001 22329000 0 0 Deletion 130000 LOC_Os01g39580 anthocyanin regulatory Lc protein, putative, expressed FN-291 Chr1 22329617 23284740 0 0 Inversion 955123 FN-291 Chr1 30770757 G-C 0 0 Single Base Substitution 0 INTRON HOMO FN-291 Chr1 35692269 G-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-291 Chr10 11481378 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-291 Chr10 242952 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-291 Chr10 8506506 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os10g16990 expressed protein FN-291 Chr10 8808661 8808662 0 0 Deletion 1 FN-291 Chr11 10329231 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-291 Chr12 22384022 G-A 0 0 Single Base Substitution 0 INTRON HET FN-291 Chr2 11465351 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-291 Chr2 13579590 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-291 Chr2 1545387 1545398 0 0 Deletion 11 LOC_Os02g03690 beta-amylase, putative, expressed FN-291 Chr2 16655976 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-291 Chr2 2366928 2366929 0 0 Deletion 1 FN-291 Chr2 2369 2369 0 0 Insertion 1 FN-291 Chr2 28040691 28040691 0 0 Insertion 3 FN-291 Chr2 8133984 8133989 0 0 Deletion 5 FN-291 Chr3 13093062 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN-291 Chr3 36055377 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-291 Chr3 4308371 4308371 0 0 Insertion 1 FN-291 Chr4 10499262 10499263 0 0 Deletion 1 FN-291 Chr4 13966441 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-291 Chr4 17236445 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-291 Chr4 35029089 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-291 Chr4 8136310 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g14540 expressed protein FN-291 Chr4 9054212 9054213 0 0 Deletion 1 FN-291 Chr5 11915610 T-A 0 0 Single Base Substitution 0 INTRON HET FN-291 Chr5 19559522 A-G 0 0 Single Base Substitution 0 INTRON HET FN-291 Chr5 6889617 6889618 0 0 Deletion 1 FN-291 Chr6 14414961 14414962 0 0 Deletion 1 FN-291 Chr6 22104280 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g37400 retrotransposon protein, putative, unclassified, expressed FN-291 Chr6 26051474 26205753 0 0 Inversion 154279 FN-291 Chr6 26051488 26205788 0 0 Inversion 154300 FN-291 Chr6 4936001 4964000 0 0 Deletion 28000 LOC_Os06g09679 chaperonin, putative, expressed FN-291 Chr6 4936001 4964000 0 0 Deletion 28000 LOC_Os06g09688 chaperonin, putative, expressed FN-291 Chr6 4936001 4964000 0 0 Deletion 28000 LOC_Os06g09698 expressed protein FN-291 Chr6 4936001 4964000 0 0 Deletion 28000 LOC_Os06g09717 ethylene-responsive transcription factor, putative, expressed FN-291 Chr6 4936001 4964000 0 0 Deletion 28000 LOC_Os06g09740 retrotransposon protein, putative, unclassified, expressed FN-291 Chr6 6334802 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN-291 Chr7 12364861 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g22120 expressed protein FN-291 Chr7 13308060 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-291 Chr7 14221291 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-291 Chr7 16058521 16058523 0 0 Deletion 2 FN-291 Chr8 12311842 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-291 Chr8 12311843 C-G 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN-291 Chr8 14673600 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN-291 Chr8 6421428 6421443 0 0 Deletion 15 FN-291 Chr8 935873 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-291 Chr9 14887831 G-T 0 0 Single Base Substitution 0 INTRON HET FN-291 Chr9 14963673 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-291 Chr9 5765019 5765025 0 0 Deletion 6