FN-341 Chr1 13159680 13159681 0 0 Deletion 1 FN-341 Chr1 24191641 24191662 0 0 Deletion 21 FN-341 Chr1 24954639 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-341 Chr1 28906728 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-341 Chr1 36107872 A-T 0 0 Single Base Substitution 0 INTRON HET FN-341 Chr1 38328951 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-341 Chr1 38328952 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-341 Chr1 39761084 39761084 0 0 Insertion 1 FN-341 Chr10 17416033 17416043 0 0 Deletion 10 FN-341 Chr10 22183543 Chr4 7084286 0 Translocation 0 FN-341 Chr10 22409273 22409274 0 0 Deletion 1 FN-341 Chr10 8282605 8282608 0 0 Deletion 3 FN-341 Chr10 8912169 8912172 0 0 Deletion 3 FN-341 Chr11 20150948 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-341 Chr11 27733241 27733250 0 0 Deletion 9 FN-341 Chr12 1437448 1437449 0 0 Deletion 1 LOC_Os12g03594 OsFBX437 - F-box domain containing protein, expressed FN-341 Chr12 19457651 19457653 0 0 Deletion 2 FN-341 Chr12 23434516 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-341 Chr12 25266943 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os12g40820 retrotransposon protein, putative, unclassified, expressed FN-341 Chr12 2683413 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g05820 expressed protein FN-341 Chr2 16044003 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-341 Chr2 21782364 21782365 0 0 Deletion 1 FN-341 Chr2 27504531 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-341 Chr2 2791140 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-341 Chr2 3598467 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-341 Chr2 4665209 T-G 0 0 Single Base Substitution 0 INTRON HET FN-341 Chr2 5221127 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN-341 Chr2 5227927 5227939 0 0 Deletion 12 FN-341 Chr2 633025 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-341 Chr2 6413292 T-C 0 0 Single Base Substitution 0 INTRON HET FN-341 Chr3 14090751 14090752 0 0 Deletion 1 FN-341 Chr3 16078768 16078768 0 0 Insertion 2 LOC_Os03g27990 STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed FN-341 Chr3 21897213 T-C 0 0 Single Base Substitution 0 INTRON HET FN-341 Chr3 2579652 2579660 0 0 Deletion 8 FN-341 Chr3 2766378 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-341 Chr4 20383850 C-A 0 0 Single Base Substitution 0 INTRON HET FN-341 Chr4 2417906 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g04990 retrotransposon protein, putative, Ty1-copia subclass, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48450 expressed protein FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48460 cytochrome P450, putative, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48470 expressed protein FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48480 exostosin family domain containing protein, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48484 expressed protein FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48490 fasciclin-like arabinogalactan protein, putative, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48500 expressed protein FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48510 growth regulating factor protein, putative, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48520 ZOS4-12 - C2H2 zinc finger protein, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48530 C4-dicarboxylate transporter/malic acid transport protein domain containing protein, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48540 dihydrodipicolinate synthase, chloroplast precursor, putative, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48550 retrotransposon protein, putative, unclassified, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48560 retrotransposon protein, putative, unclassified, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48570 conserved hypothetical protein FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48580 retrotransposon protein, putative, unclassified, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48590 retrotransposon protein, putative, unclassified, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48600 expressed protein FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48630 expressed protein FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48640 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48650 retrotransposon protein, putative, Ty3-gypsy subclass FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48660 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48670 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48680 retrotransposon protein, putative, Ty3-gypsy subclass FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48690 expressed protein FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48700 TruB family pseudouridylate synthase, putative, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48710 expressed protein FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48720 expressed protein FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48730 expressed protein FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48740 hypothetical protein FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48750 3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48760 leucine-rich repeat family protein, putative, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48770 ubiquitin fusion degradation protein, putative, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48780 transposon protein, putative, unclassified, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48790 rhoGAP domain containing protein, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48800 GDSL-like lipase/acylhydrolase, putative, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48810 expressed protein FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48820 deoxyribonuclease tatD, putative, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48830 DUF623 domain containing protein, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48840 expressed protein FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48850 aminotransferase, classes I and II, domain containing protein, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48870 nitrilase-associated protein, putative, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48880 fatty acid hydroxylase, putative, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48890 hypothetical protein FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48910 retrotransposon protein, putative, Ty3-gypsy subclass FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48920 retrotransposon protein, putative, unclassified, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48930 ferric-chelate reductase, putative, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48940 uncharacterized mscS family protein, putative, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48950 fringe-related protein, putative, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48960 expressed protein FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48970 transposon protein, putative, unclassified, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g48980 hypothetical protein FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g49000 zinc finger, C3HC4 type domain containing protein, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g49010 retrotransposon protein, putative, unclassified FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g49020 retrotransposon protein, putative, unclassified FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g49030 retrotransposon protein, putative, unclassified FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g49040 retrotransposon protein, putative, unclassified, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g49050 expressed protein FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g49060 H-BTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g49070 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g49080 rRNA 2-O-methyltransferase fibrillarin, putative, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g49090 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g49100 retrotransposon protein, putative, Ty1-copia subclass, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g49110 GRAS family transcription factor domain containing protein, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g49120 retrotransposon protein, putative, LINE subclass FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g49130 ubiquitin-conjugating enzyme, putative, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g49140 expressed protein FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g49150 OsMADS17 - MADS-box family gene with MIKCc type-box, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g49160 zinc finger, C3HC4 type domain containing protein, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g49170 zinc finger, C3HC4 type domain containing protein, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g49180 expressed protein FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g49194 naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g49210 naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed FN-341 Chr4 28888523 29362078 0 0 Deletion 473555 LOC_Os04g49220 mitochondrial import inner membrane translocase subunit Tim, putative, expressed FN-341 Chr4 31424484 31424489 0 0 Deletion 5 LOC_Os04g52780 leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed FN-341 Chr4 31979990 31979991 0 0 Deletion 1 LOC_Os04g53660 transposon protein, putative, unclassified, expressed FN-341 Chr4 33608480 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-341 Chr4 5245748 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-341 Chr5 12178208 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os05g20750 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-341 Chr5 14216001 14264000 0 0 Deletion 48000 LOC_Os05g24620 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-341 Chr5 14216001 14264000 0 0 Deletion 48000 LOC_Os05g24630 hypothetical protein FN-341 Chr5 14216001 14264000 0 0 Deletion 48000 LOC_Os05g24640 retrotransposon protein, putative, unclassified, expressed FN-341 Chr5 14216001 14264000 0 0 Deletion 48000 LOC_Os05g24650 DUF567 domain containing protein, putative, expressed FN-341 Chr5 14216001 14264000 0 0 Deletion 48000 LOC_Os05g24654 transposon protein, putative, unclassified, expressed FN-341 Chr5 14216001 14264000 0 0 Deletion 48000 LOC_Os05g24660 IPP transferase, putative, expressed FN-341 Chr5 17346736 17346737 0 0 Deletion 1 FN-341 Chr5 20239916 20239916 0 0 Insertion 2 FN-341 Chr5 21658594 21659287 0 0 Deletion 693 FN-341 Chr6 14741569 14741578 0 0 Deletion 9 LOC_Os06g25200 retrotransposon protein, putative, unclassified, expressed FN-341 Chr6 15512549 15512554 0 0 Deletion 5 FN-341 Chr6 2617627 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN-341 Chr7 11959859 11959865 0 0 Deletion 6 FN-341 Chr7 16549786 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os07g28350 expressed protein FN-341 Chr7 18219417 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN-341 Chr7 27110577 27110578 0 0 Deletion 1 FN-341 Chr7 8099578 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os07g14210 retrotransposon protein, putative, unclassified FN-341 Chr7 8352199 8365423 0 0 Deletion 13224 LOC_Os07g14650 expressed protein FN-341 Chr7 8352199 8365423 0 0 Deletion 13224 LOC_Os07g14660 harpin-induced protein 1 domain containing protein, expressed FN-341 Chr7 8352199 8365423 0 0 Deletion 13224 LOC_Os07g14670 transposon protein, putative, unclassified, expressed FN-341 Chr7 8352199 8365423 0 0 Deletion 13224 LOC_Os07g14680 expressed protein FN-341 Chr8 20974149 20974175 0 0 Deletion 26 FN-341 Chr8 22060515 22060519 0 0 Deletion 4 LOC_Os08g35020 retrotransposon protein, putative, unclassified, expressed FN-341 Chr8 23566037 23566039 0 0 Deletion 2 LOC_Os08g37280 PWWP domain containing protein, expressed FN-341 Chr8 23850776 A-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN-341 Chr8 4191675 4191692 0 0 Deletion 17 LOC_Os08g07480 DNA-directed RNA polymerase subunit, putative, expressed FN-341 Chr8 9680001 9719000 0 0 Deletion 39000 LOC_Os08g15900 transposon protein, putative, unclassified, expressed FN-341 Chr8 9680001 9719000 0 0 Deletion 39000 LOC_Os08g15910 expressed protein FN-341 Chr8 9680001 9719000 0 0 Deletion 39000 LOC_Os08g15920 expressed protein FN-341 Chr8 9680001 9719000 0 0 Deletion 39000 LOC_Os08g15930 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-341 Chr8 9680001 9719000 0 0 Deletion 39000 LOC_Os08g15940 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-341 Chr8 9680001 9719000 0 0 Deletion 39000 LOC_Os08g15950 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-341 Chr8 9680001 9719000 0 0 Deletion 39000 LOC_Os08g15960 expressed protein FN-341 Chr9 13645713 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN-341 Chr9 13645715 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-341 Chr9 18029629 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-341 Chr9 3368176 3368178 0 0 Deletion 2