FN-400 Chr1 1509530 C-T 0 0 Single Base Substitution 0 INTRON HET FN-400 Chr1 18022671 C-G 0 0 Single Base Substitution 0 INTRON HET FN-400 Chr1 28462357 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-400 Chr1 29547558 29547566 0 0 Deletion 8 FN-400 Chr1 3781995 C-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN-400 Chr10 12001228 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-400 Chr10 17932932 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-400 Chr10 21511777 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN-400 Chr10 21511778 A-T 0 0 Single Base Substitution 0 STOP_GAINED HOMO LOC_Os10g40180 retrotransposon protein, putative, unclassified, expressed FN-400 Chr10 6859713 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-400 Chr11 11360475 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-400 Chr11 14696960 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-400 Chr11 16522405 16522406 0 0 Deletion 1 FN-400 Chr11 21587799 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-400 Chr11 21717837 21717844 0 0 Deletion 7 FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42590 expressed protein FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42600 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42610 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42620 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42630 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42640 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42660 Leucine Rich Repeat family protein, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42670 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42680 NBS-LRR type disease resistance protein, putative FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42690 expressed protein FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42700 NBS-LRR type disease resistance protein, putative, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42710 retrotransposon protein, putative, unclassified, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42720 retrotransposon protein, putative, unclassified, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42730 lipase class 3, putative, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42740 expressed protein FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42750 retrotransposon protein, putative, unclassified, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42760 expressed protein FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42770 Leucine Rich Repeat family protein, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42780 transposon protein, putative, unclassified, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42790 transporter, monovalent cation:proton antiporter-2 family, putative, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42800 kinesin motor domain containing protein, putative, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42810 expressed protein FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42820 retrotransposon protein, putative, Ty3-gypsy subclass FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42830 retrotransposon protein, putative, Ty3-gypsy subclass FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42840 expressed protein FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42850 expressed protein FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42860 expressed protein FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42870 hypothetical protein FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42880 expressed protein FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42890 expressed protein FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42900 expressed protein FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42910 expressed protein FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42920 expressed protein FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42930 expressed protein FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42940 integral membrane protein, putative, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42950 expressed protein FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42960 integral membrane protein TIGR01569 containing protein, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42970 membrane associated DUF588 domain containing protein, putative, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42980 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g42989 exo70 exocyst complex subunit, putative, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43000 ATEXO70G1, putative, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43010 retrotransposon, putative, centromere-specific FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43020 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43030 von Willebrand factor type A domain containing protein, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43040 retrotransposon protein, putative, unclassified, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43049 exo70 exocyst complex subunit, putative, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43060 transposon protein, putative, unclassified, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43070 expressed protein FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43080 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43090 retrotransposon protein, putative, Ty3-gypsy subclass FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43100 retrotransposon protein, putative, Ty3-gypsy subclass FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43110 transposon protein, putative, CACTA, En/Spm sub-class FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43120 transposon protein, putative, CACTA, En/Spm sub-class FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43130 retrotransposon protein, putative, unclassified FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43140 expressed protein FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43150 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43160 transposon protein, putative, CACTA, En/Spm sub-class FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43170 hypothetical protein FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43180 expressed protein FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43200 tropinone reductase 2, putative, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43210 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43220 expressed protein FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43230 retrotransposon protein, putative, Ty1-copia subclass, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43240 expressed protein FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43250 Leucine Rich Repeat family protein, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43260 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43270 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43280 transposon protein, putative, CACTA, En/Spm sub-class FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43300 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43310 expressed protein FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43320 NBS-LRR type disease resistance protein, putative, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43330 retrotransposon protein, putative, unclassified, expressed FN-400 Chr11 25636001 26162000 0 0 Deletion 526000 LOC_Os11g43340 expressed protein FN-400 Chr11 4888630 4888630 0 0 Insertion 4 FN-400 Chr12 15584391 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g26610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-400 Chr2 12624879 12624885 0 0 Deletion 6 FN-400 Chr2 14976411 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-400 Chr2 15364854 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os02g26160 receptor lectin kinase like protein, putative, expressed FN-400 Chr2 9606960 G-A 0 0 Single Base Substitution 0 INTRON HET FN-400 Chr3 10262719 A-C 0 0 Single Base Substitution 0 INTRON HET FN-400 Chr3 15130503 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-400 Chr3 15130504 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-400 Chr4 13343978 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-400 Chr4 29492001 29538000 0 0 Deletion 46000 LOC_Os04g49430 ZR1 protein, putative, expressed FN-400 Chr4 29492001 29538000 0 0 Deletion 46000 LOC_Os04g49440 RNA recognition motif containing protein, putative, expressed FN-400 Chr4 29492001 29538000 0 0 Deletion 46000 LOC_Os04g49450 MYB family transcription factor, putative, expressed FN-400 Chr4 29492001 29538000 0 0 Deletion 46000 LOC_Os04g49460 protein kinase domain containing protein, expressed FN-400 Chr4 29492001 29538000 0 0 Deletion 46000 LOC_Os04g49480 legume lectins beta domain containing protein, putative, expressed FN-400 Chr4 29492001 29538000 0 0 Deletion 46000 LOC_Os04g49490 protein phosphatase 2C, putative, expressed FN-400 Chr4 29492001 29538000 0 0 Deletion 46000 LOC_Os04g49500 U-box domain-containing protein, putative, expressed FN-400 Chr4 29492001 29538000 0 0 Deletion 46000 LOC_Os04g49510 CAMK_CAMK_like.27 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN-400 Chr4 29492001 29538000 0 0 Deletion 46000 LOC_Os04g49520 pentatricopeptide repeat protein PPR868-14, putative, expressed FN-400 Chr4 30686975 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN-400 Chr5 24181610 24181610 0 0 Insertion 6 FN-400 Chr5 28939400 28939433 0 0 Deletion 33 FN-400 Chr5 28946281 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN-400 Chr6 24712163 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-400 Chr6 26379269 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-400 Chr7 28504945 G-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN-400 Chr8 12007088 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-400 Chr8 1411551 1919231 0 0 Inversion 507680 FN-400 Chr8 16957189 16957190 0 0 Deletion 1 FN-400 Chr8 24668938 24668945 0 0 Deletion 7 FN-400 Chr9 10240858 10395821 0 0 Inversion 154963 FN-400 Chr9 16210852 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os09g26680 transposon protein, putative, Ac/Ds sub-class, expressed