FN-41 Chr1 15985876 15985890 0 0 Deletion 14 LOC_Os01g28550 retrotransposon protein, putative, Ty1-copia subclass FN-41 Chr1 606410 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN-41 Chr1 606411 T-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN-41 Chr10 19939828 19939849 0 0 Deletion 21 FN-41 Chr10 21476270 A-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Homo FN-41 Chr10 21491890 21498428 0 0 Deletion 6538 LOC_Os10g40150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-41 Chr10 21561864 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os10g40250 expressed protein FN-41 Chr10 21561865 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os10g40250 expressed protein FN-41 Chr10 22540434 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN-41 Chr11 20039859 20175364 0 0 Inversion 135505 LOC_Os11g34440 phospholipase A2, putative, expressed FN-41 Chr12 11879114 11908875 0 0 Deletion 29761 LOC_Os12g20340 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-41 Chr12 11879114 11908875 0 0 Deletion 29761 LOC_Os12g20350 retrotransposon protein, putative, unclassified, expressed FN-41 Chr12 11879114 11908875 0 0 Deletion 29761 LOC_Os12g20360 hypothetical protein FN-41 Chr12 11879114 11908875 0 0 Deletion 29761 LOC_Os12g20370 expressed protein FN-41 Chr12 11879114 11908875 0 0 Deletion 29761 LOC_Os12g20380 expressed protein FN-41 Chr12 11879114 11908875 0 0 Deletion 29761 LOC_Os12g20390 expressed protein FN-41 Chr12 16577148 T-C 0 0 Single Base Substitution 0 INTRON Homo FN-41 Chr2 17729027 17729037 0 0 Deletion 10 FN-41 Chr2 21301784 21301798 0 0 Deletion 14 FN-41 Chr2 24784550 24784577 0 0 Deletion 27 FN-41 Chr2 31486549 31486557 0 0 Deletion 8 FN-41 Chr2 34435828 34435843 0 0 Deletion 15 FN-41 Chr2 5259932 5259987 0 0 Deletion 55 LOC_Os02g10100 leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed FN-41 Chr2 8183671 8183672 0 0 Deletion 1 LOC_Os02g14770 phosphoenolpyruvate carboxylase, putative, expressed FN-41 Chr3 21625620 21625626 0 0 Deletion 6 FN-41 Chr3 22271258 22271264 0 0 Deletion 6 FN-41 Chr3 27783107 27783107 0 0 Insertion 1 FN-41 Chr3 2830498 3114970 0 0 Inversion 284472 LOC_Os03g06210 expressed protein FN-41 Chr4 18702339 Chr1 15347442 0 Translocation 0 LOC_Os01g27490 leucoanthocyanidin dioxygenase, putative, expressed FN-41 Chr4 18702340 Chr1 13635566 0 Translocation 0 LOC_Os01g24200 expressed protein FN-41 Chr4 3116779 C-T 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os04g06010 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12280 retrotransposon protein, putative, Ty3-gypsy subclass FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12290 retrotransposon protein, putative, Ty3-gypsy subclass FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12300 retrotransposon protein, putative, Ty3-gypsy subclass FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12310 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12340 retrotransposon protein, putative, Ty3-gypsy subclass FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12350 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12360 retrotransposon protein, putative, unclassified, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12370 expressed protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12380 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12390 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12400 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12410 retrotransposon protein, putative, unclassified, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12420 retrotransposon protein, putative, unclassified, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12430 expressed protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12440 retrotransposon protein, putative, unclassified, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12450 expressed protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12460 Leucine Rich Repeat family protein, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12480 pumilio-family RNA binding repeat containing protein, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12490 retrotransposon protein, putative, unclassified FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12499 amino acid transporter protein, putative, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12520 transposon protein, putative, unclassified, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12530 amino acid transporter family protein, putative, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12540 receptor-like protein kinase, putative, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12550 expressed protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12560 receptor-like protein kinase, putative, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12570 hypothetical protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12580 receptor-like protein kinase, putative, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12589 expressed protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12600 receptor-like protein kinase, putative, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12620 expressed protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12639 carboxyl-terminal proteinase, putative, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12660 vignain precursor, putative, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12669 expressed protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12690 N-hydroxythioamide S-beta-glucosyltransferase, putative, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12700 retrotransposon protein, putative, unclassified, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12710 indole-3-acetate beta-glucosyltransferase, putative, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12720 indole-3-acetate beta-glucosyltransferase, putative, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12730 expressed protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12744 expressed protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12760 retrotransposon protein, putative, unclassified, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12770 retrotransposon protein, putative, unclassified, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12780 retrotransposon protein, putative, unclassified FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12790 expressed protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12800 expressed protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12820 expressed protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12830 expressed protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12850 expressed protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12864 retrotransposon protein, putative, unclassified FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12880 retrotransposon protein, putative, unclassified, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12890 retrotransposon protein, putative, unclassified, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12900 glucosyltransferase, putative, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12920 expressed protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12950 indole-3-acetate beta-glucosyltransferase, putative, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12960 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12970 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12980 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g12990 OsFBX122 - F-box domain containing protein, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13000 retrotransposon protein, putative, LINE subclass, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13010 OsFBX123 - F-box domain containing protein, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13020 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13040 OsFBX124 - F-box domain containing protein, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13050 expressed protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13060 expressed protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13070 hypothetical protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13080 retrotransposon, putative, centromere-specific, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13090 vignain precursor, putative, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13100 retrotransposon protein, putative, unclassified, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13110 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13120 retrotransposon protein, putative, unclassified FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13130 hypothetical protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13140 vignain precursor, putative, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13150 OsFBX125 - F-box domain containing protein, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13160 OsFBD9 - F-box and FBD domain containing protein, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13170 OsFBD10 - F-box and FBD domain containing protein, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13180 retrotransposon protein, putative, unclassified, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13190 expressed protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13200 expressed protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13210 multidrug resistance-associated protein, putative, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13220 ABC transporter family protein, putative, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13230 expressed protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13240 retrotransposon protein, putative, Ty1-copia subclass, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13250 retrotransposon protein, putative, unclassified, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13260 expressed protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13280 expressed protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13290 retrotransposon protein, putative, unclassified, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13300 hypothetical protein FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13310 retrotransposon protein, putative, unclassified, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13320 retrotransposon protein, putative, unclassified, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13330 retrotransposon protein, putative, unclassified FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13340 retrotransposon protein, putative, unclassified FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13350 retrotransposon protein, putative, unclassified, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13364 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13380 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13390 retrotransposon protein, putative, unclassified FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13400 retrotransposon protein, putative, unclassified FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13410 retrotransposon protein, putative, unclassified FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13420 retrotransposon protein, putative, unclassified FN-41 Chr4 6779001 7480000 0 0 Deletion 701000 LOC_Os04g13430 expressed protein FN-41 Chr5 28009513 G-T 0 0 Single Base Substitution 0 UTR_3_PRIME Homo FN-41 Chr5 6846966 7515281 0 0 Inversion 668315 LOC_Os05g11980 timeless protein, expressed FN-41 Chr5 6867112 7510322 0 0 Inversion 643210 FN-41 Chr5 7657168 7657611 0 0 Deletion 443 FN-41 Chr6 17168192 17168192 0 0 Insertion 1 FN-41 Chr6 7457300 Chr1 15348113 0 Translocation 0 FN-41 Chr7 16913024 16913027 0 0 Deletion 3 FN-41 Chr7 17438543 A-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN-41 Chr8 14740268 14740268 0 0 Insertion 6 FN-41 Chr8 16942061 16942062 0 0 Deletion 1 FN-41 Chr8 27883292 27883328 0 0 Deletion 36 FN-41 Chr8 325913 325913 0 0 Insertion 4 FN-41 Chr8 5659275 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING Homo FN-41 Chr9 1095879 1095880 0 0 Deletion 1