FN-411 Chr1 12445036 A-G 0 0 Single Base Substitution 0 INTRON HET FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28710 expressed protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28720 hypothetical protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28730 protein kinase domain containing protein, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28740 transposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28744 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28750 retrotransposon, putative, centromere-specific FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28760 retrotransposon protein, putative, Ty1-copia subclass, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28770 hypothetical protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28780 hypothetical protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28790 PRAS-rich protein, putative, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28800 retrotransposon protein, putative, unclassified FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28810 expressed protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28820 retrotransposon, putative, centromere-specific, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28830 expressed protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28840 C4-dicarboxylate transporter/malic acid transport protein, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28850 expressed protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28870 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28882 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28894 retrotransposon protein, putative, unclassified FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28910 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28920 retrotransposon, putative, centromere-specific, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28930 expressed protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28940 hypothetical protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28950 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28970 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28980 proton-dependent oligopeptide transport, putative, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g28989 expressed protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29000 retrotransposon, putative, centromere-specific, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29020 retrotransposon, putative, centromere-specific, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29030 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29040 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29050 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29060 transposon protein, putative, unclassified FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29070 retrotransposon protein, putative, unclassified FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29080 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29090 retrotransposon protein, putative, unclassified FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29100 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29104 expressed protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29110 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29120 retrotransposon, putative, centromere-specific FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29130 retrotransposon, putative, centromere-specific FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29140 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29150 cytochrome P450 72A1, putative, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29160 retrotransposon protein, putative, Ty1-copia subclass FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29170 retrotransposon protein, putative, Ty1-copia subclass FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29180 expressed protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29190 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29200 transposon protein, putative, unclassified FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29210 hypothetical protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29220 expressed protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29230 expressed protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29240 expressed protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29250 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29260 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29270 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29280 expressed protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29300 hypothetical protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29310 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29320 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29330 expressed protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29340 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29350 hypothetical protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29370 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29380 retrotransposon protein, putative, unclassified FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29390 expressed protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29409 tRNA methyltransferase, putative, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29430 tetratricopeptide-like helical, putative, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29450 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29469 dual specificity protein phosphatase, putative, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29488 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29507 retrotransposon, putative, centromere-specific, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29550 expressed protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29560 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29580 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29590 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29600 expressed protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29610 expressed protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29620 retrotransposon protein, putative, Ty1-copia subclass FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29640 expressed protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29650 retrotransposon protein, putative, Ty1-copia subclass, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29660 retrotransposon protein, putative, Ty3-gypsy subclass FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29670 retrotransposon protein, putative, Ty3-gypsy subclass FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29680 retrotransposon protein, putative, Ty1-copia subclass, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29690 expressed protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29700 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29710 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29720 expressed protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29730 retrotransposon protein, putative, Ty3-gypsy subclass FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29740 expressed protein FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29750 transposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29760 retrotransposon protein, putative, unclassified, expressed FN-411 Chr1 16075001 16688000 0 0 Deletion 613000 LOC_Os01g29780 expressed protein FN-411 Chr1 16075037 42755540 0 0 Inversion 26680503 LOC_Os01g73800 expressed protein FN-411 Chr1 16075492 42755533 0 0 Inversion 26680041 LOC_Os01g73800 expressed protein FN-411 Chr1 25475572 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-411 Chr1 29322201 29322201 0 0 Insertion 1 FN-411 Chr1 31172182 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-411 Chr1 32747160 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-411 Chr1 39443450 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN-411 Chr10 17838567 17838567 0 0 Insertion 4 FN-411 Chr10 256954 256967 0 0 Deletion 13 FN-411 Chr10 3903197 3903199 0 0 Deletion 2 FN-411 Chr10 644180 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os10g02020 expressed protein FN-411 Chr11 10767908 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-411 Chr11 14858918 14858919 0 0 Deletion 1 FN-411 Chr11 18327659 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-411 Chr11 18327660 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-411 Chr11 21404841 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-411 Chr12 15368557 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-411 Chr12 22542881 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-411 Chr12 26909980 26909980 0 0 Insertion 3 LOC_Os12g43370 peptidase, M24 family protein, putative, expressed FN-411 Chr2 29369078 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-411 Chr2 8530750 8530773 0 0 Deletion 23 FN-411 Chr2 8806079 8806080 0 0 Deletion 1 FN-411 Chr3 19996278 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN-411 Chr3 28478898 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g49960 expressed protein FN-411 Chr3 31322163 31322167 0 0 Deletion 4 FN-411 Chr4 13696780 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-411 Chr4 20348590 20348590 0 0 Insertion 4 FN-411 Chr4 26751968 26751969 0 0 Deletion 1 FN-411 Chr4 26886236 T-C 0 0 Single Base Substitution 0 INTRON HOMO FN-411 Chr4 27007308 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-411 Chr4 29841132 29841138 0 0 Deletion 6 FN-411 Chr4 30831199 30831200 0 0 Deletion 1 FN-411 Chr4 35493177 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-411 Chr4 5420984 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-411 Chr4 8028897 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-411 Chr5 10037426 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g17470 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-411 Chr5 17734265 17734277 0 0 Deletion 12 LOC_Os05g30610 retrotransposon protein, putative, unclassified, expressed FN-411 Chr5 1919262 1919278 0 0 Deletion 16 FN-411 Chr5 20419398 20419402 0 0 Deletion 4 FN-411 Chr5 28943960 28943961 0 0 Deletion 1 LOC_Os05g50480 protein of unknown function DUF1296 domain containing protein, expressed FN-411 Chr5 8938715 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-411 Chr6 26788379 A-T 0 0 Single Base Substitution 0 INTRON HOMO FN-411 Chr6 6360577 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-411 Chr7 1822603 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-411 Chr7 21394611 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-411 Chr7 23299744 A-G 0 0 Single Base Substitution 0 INTRON HET FN-411 Chr7 24782146 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-411 Chr7 25233960 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-411 Chr7 4570092 4570092 0 0 Insertion 2 FN-411 Chr7 8056484 8056485 0 0 Deletion 1 FN-411 Chr8 22797696 22797696 0 0 Insertion 2 FN-411 Chr8 23763077 23876498 0 0 Deletion 113421 LOC_Os08g37520 pentatricopeptide, putative, expressed FN-411 Chr8 23763077 23876498 0 0 Deletion 113421 LOC_Os08g37530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-411 Chr8 23763077 23876498 0 0 Deletion 113421 LOC_Os08g37540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-411 Chr8 23763077 23876498 0 0 Deletion 113421 LOC_Os08g37550 retrotransposon protein, putative, unclassified, expressed FN-411 Chr8 23763077 23876498 0 0 Deletion 113421 LOC_Os08g37560 retrotransposon protein, putative, unclassified, expressed FN-411 Chr8 23763077 23876498 0 0 Deletion 113421 LOC_Os08g37570 spotted leaf 11, putative, expressed FN-411 Chr8 23763077 23876498 0 0 Deletion 113421 LOC_Os08g37580 homeobox associated leucine zipper, putative, expressed FN-411 Chr8 23763077 23876498 0 0 Deletion 113421 LOC_Os08g37590 expressed protein FN-411 Chr8 23763077 23876498 0 0 Deletion 113421 LOC_Os08g37595 expressed protein FN-411 Chr8 23763077 23876498 0 0 Deletion 113421 LOC_Os08g37600 citrate transporter, putative, expressed FN-411 Chr8 23763077 23876498 0 0 Deletion 113421 LOC_Os08g37605 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed FN-411 Chr8 23763077 23876498 0 0 Deletion 113421 LOC_Os08g37610 expressed protein FN-411 Chr8 23763077 23876498 0 0 Deletion 113421 LOC_Os08g37630 elastin precursor, putative, expressed FN-411 Chr8 23763077 23876498 0 0 Deletion 113421 LOC_Os08g37640 hypothetical protein FN-411 Chr8 23763077 23876498 0 0 Deletion 113421 LOC_Os08g37650 expressed protein FN-411 Chr8 23763077 23876498 0 0 Deletion 113421 LOC_Os08g37660 plastocyanin-like domain containing protein, putative, expressed FN-411 Chr8 23763077 23876498 0 0 Deletion 113421 LOC_Os08g37670 plastocyanin-like domain containing protein, putative, expressed FN-411 Chr8 23763077 23876498 0 0 Deletion 113421 LOC_Os08g37680 expressed protein FN-411 Chr8 23763077 23876498 0 0 Deletion 113421 LOC_Os08g37690 expressed protein FN-411 Chr8 23763077 23876498 0 0 Deletion 113421 LOC_Os08g37700 RNA recognition motif containing protein, putative, expressed FN-411 Chr9 13447647 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os09g22230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-411 Chr9 14344742 14344743 0 0 Deletion 1 LOC_Os09g24159 pollen allergen Cyn d 23, putative, expressed FN-411 Chr9 15841345 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-411 Chr9 4082641 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g07950 retrotransposon protein, putative, unclassified, expressed