FN-50 Chr1 10172192 10172192 0 0 Insertion 2 FN-50 Chr1 19713864 G-T 0 0 Single Base Substitution 0 INTERGENIC Homo FN-50 Chr1 23912303 23912303 0 0 Insertion 2 FN-50 Chr1 2549378 2549378 0 0 Insertion 22 FN-50 Chr1 30422285 30422289 0 0 Deletion 4 LOC_Os01g52910 expressed protein FN-50 Chr1 31341027 31341028 0 0 Deletion 1 FN-50 Chr10 12999606 12999619 0 0 Deletion 13 LOC_Os10g25180 phosphoinositide phosphatase family protein, putative, expressed FN-50 Chr10 13690346 13690346 0 0 Insertion 2 FN-50 Chr10 18056551 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os10g33940 auxin response factor 18, putative, expressed FN-50 Chr10 1910221 1910224 0 0 Deletion 3 FN-50 Chr11 16367368 16367368 0 0 Insertion 2 FN-50 Chr11 18769313 18769317 0 0 Deletion 4 FN-50 Chr11 18804838 18804838 0 0 Insertion 4 FN-50 Chr11 23528183 A-T 0 0 Single Base Substitution 0 INTRON Homo FN-50 Chr11 25885371 25885371 0 0 Insertion 4 FN-50 Chr11 26038899 26038899 0 0 Insertion 2 FN-50 Chr11 26129615 26129615 0 0 Insertion 2 FN-50 Chr11 7038123 7038123 0 0 Insertion 3 FN-50 Chr12 22737518 A-C 0 0 Single Base Substitution 0 INTERGENIC Homo FN-50 Chr12 23461991 23461991 0 0 Insertion 2 FN-50 Chr12 23826389 A-T 0 0 Single Base Substitution 0 INTRON Homo FN-50 Chr12 25227788 25227791 0 0 Deletion 3 FN-50 Chr12 27478963 27478964 0 0 Deletion 1 FN-50 Chr2 11631001 11643000 0 0 Deletion 12000 FN-50 Chr2 11640727 13153786 0 0 Inversion 1513059 FN-50 Chr2 12681053 13151441 0 0 Inversion 470388 FN-50 Chr2 16017874 16017876 0 0 Deletion 2 FN-50 Chr2 16958987 16958987 0 0 Insertion 3 FN-50 Chr2 1760273 1760278 0 0 Deletion 5 FN-50 Chr2 17850754 17850754 0 0 Insertion 2 FN-50 Chr2 6394878 6394878 0 0 Insertion 2 FN-50 Chr3 10202816 10202816 0 0 Insertion 6 FN-50 Chr3 14193059 14193059 0 0 Insertion 41 FN-50 Chr3 1479076 T-C 0 0 Single Base Substitution 0 INTRON Homo FN-50 Chr3 22481238 22481241 0 0 Deletion 3 FN-50 Chr3 24268154 24268154 0 0 Insertion 22 FN-50 Chr3 26901345 26901345 0 0 Insertion 1 FN-50 Chr3 32795544 32795565 0 0 Deletion 21 FN-50 Chr3 33375023 33375024 0 0 Deletion 1 LOC_Os03g58600 PAZ domain containing protein, putative, expressed FN-50 Chr3 381152 381152 0 0 Insertion 6 FN-50 Chr4 17788550 17788550 0 0 Insertion 3 FN-50 Chr4 20356376 20356376 0 0 Insertion 2 FN-50 Chr4 20701596 20701596 0 0 Insertion 2 FN-50 Chr4 21426409 21426409 0 0 Insertion 8 FN-50 Chr4 2677170 2677178 0 0 Deletion 8 LOC_Os04g05370 retrotransposon protein, putative, unclassified, expressed FN-50 Chr4 347730 347730 0 0 Insertion 4 FN-50 Chr4 8326043 G-A 0 0 Single Base Substitution 0 INTERGENIC Homo FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15590 expressed protein FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15600 receptor kinase, putative, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15620 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15630 xa21, putative, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15640 expressed protein FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15650 Leucine Rich Repeat family protein, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15660 receptor kinase, putative, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15670 expressed protein FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15680 expressed protein FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15690 DSBA-like thioredoxin domain containing protein, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15730 retrotransposon protein, putative, Ty1-copia subclass FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15740 DEFL50 - Defensin and Defensin-like DEFL family, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15760 DEFL51 - Defensin and Defensin-like DEFL family, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15765 retrotransposon protein, putative, unclassified FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15770 retrotransposon protein, putative, unclassified FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15780 expressed protein FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15790 eukaryotic aspartyl protease domain containing protein, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15800 expressed protein FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15820 expressed protein FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15840 expansin precursor, putative, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15850 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15870 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15880 expressed protein FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15890 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15910 hAT dimerisation domain-containing protein, putative, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15920 dehydrogenase, putative, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15930 retrotransposon protein, putative, unclassified, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15944 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15960 retrotransposon protein, putative, Ty3-gypsy subclass FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15970 retrotransposon, putative, centromere-specific, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15980 retrotransposon protein, putative, unclassified, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g15990 transposon protein, putative, CACTA, En/Spm sub-class FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16010 transposon protein, putative, CACTA, En/Spm sub-class FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16020 expressed protein FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16030 transposon protein, putative, CACTA, En/Spm sub-class FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16040 retrotransposon protein, putative, unclassified FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16050 expressed protein FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16060 expressed protein FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16070 expressed protein FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16080 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16090 transposon protein, putative, unclassified FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16110 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16120 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16130 transposon protein, putative, Ac/Ds sub-class, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16140 expressed protein FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16150 retrotransposon protein, putative, unclassified, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16160 expressed protein FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16170 retrotransposon protein, putative, unclassified, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16180 retrotransposon protein, putative, unclassified FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16190 retrotransposon protein, putative, unclassified, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16220 retrotransposon protein, putative, Ty3-gypsy subclass FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16230 expressed protein FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16240 retrotransposon protein, putative, Ty3-gypsy subclass FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16260 retrotransposon protein, putative, unclassified FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16270 nucleic acid binding protein, putative, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16280 retrotransposon protein, putative, unclassified, expressed FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16290 retrotransposon protein, putative, unclassified FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16300 retrotransposon protein, putative, unclassified FN-50 Chr4 8477001 8863000 0 0 Deletion 386000 LOC_Os04g16314 retrotransposon, putative, centromere-specific, expressed FN-50 Chr5 16387468 16387468 0 0 Insertion 1 FN-50 Chr5 21203685 T-C 0 0 Single Base Substitution 0 INTRON Homo FN-50 Chr5 267129 267129 0 0 Insertion 1 FN-50 Chr5 763686 763686 0 0 Insertion 2 LOC_Os05g02350 endonuclease/exonuclease/phosphatase family domain containing protein, expressed FN-50 Chr5 7814999 7814999 0 0 Insertion 2 FN-50 Chr6 13956518 13956526 0 0 Deletion 8 FN-50 Chr6 15135009 15135011 0 0 Deletion 2 FN-50 Chr6 200212 Chr5 25603983 0 Translocation 0 LOC_Os05g44010 retrotransposon protein, putative, Ty3-gypsy subclass FN-50 Chr6 200212 Chr5 25603983 0 Translocation 0 LOC_Os06g01320 chromo domain containing protein, expressed FN-50 Chr6 205188 Chr5 25603982 0 Translocation 0 LOC_Os05g44010 retrotransposon protein, putative, Ty3-gypsy subclass FN-50 Chr6 205188 Chr5 25603982 0 Translocation 0 LOC_Os06g01320 chromo domain containing protein, expressed FN-50 Chr6 22492056 22492072 0 0 Deletion 16 LOC_Os06g38040 retrotransposon protein, putative, unclassified, expressed FN-50 Chr6 27897723 27897727 0 0 Deletion 4 FN-50 Chr6 4464678 4464678 0 0 Insertion 4 FN-50 Chr7 13520009 13520014 0 0 Deletion 5 LOC_Os07g23920 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-50 Chr7 17135544 17135544 0 0 Insertion 1 FN-50 Chr7 3643477 3643477 0 0 Insertion 3 FN-50 Chr7 8045906 8045906 0 0 Insertion 4 FN-50 Chr7 9287772 9287805 0 0 Deletion 33 FN-50 Chr8 20425353 20425353 0 0 Insertion 2 FN-50 Chr8 23904092 23904094 0 0 Deletion 2 LOC_Os08g37740 retrotransposon protein, putative, unclassified, expressed FN-50 Chr8 3431722 3431723 0 0 Deletion 1 LOC_Os08g06220 transferase, putative, expressed FN-50 Chr8 8159977 T-G 0 0 Single Base Substitution 0 UTR_3_PRIME Homo FN-50 Chr8 970783 970783 0 0 Insertion 6 FN-50 Chr9 10786503 10786503 0 0 Insertion 4 FN-50 Chr9 14446446 14446447 0 0 Deletion 1 FN-50 Chr9 17152786 17152786 0 0 Insertion 28 FN-50 Chr9 18007372 C-T 0 0 Single Base Substitution 0 INTRON Homo