FN-66 Chr1 10007813 10007817 0 0 Deletion 4 FN-66 Chr1 25351269 25351272 0 0 Deletion 3 FN-66 Chr1 34288142 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-66 Chr1 37189700 37189715 0 0 Deletion 15 FN-66 Chr10 10085587 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-66 Chr10 16769362 G-T 0 0 Single Base Substitution 0 INTRON HET FN-66 Chr10 21355368 21355371 0 0 Deletion 3 LOC_Os10g39910 expressed protein FN-66 Chr10 22178807 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN-66 Chr11 14835925 A-T 0 0 Single Base Substitution 0 INTRON HOMO FN-66 Chr11 16627036 17244538 0 0 Inversion 617502 FN-66 Chr11 17938952 T-C 0 0 Single Base Substitution 0 INTRON HOMO FN-66 Chr11 25399803 25430255 0 0 Deletion 30452 LOC_Os11g42170 expressed protein FN-66 Chr11 25399803 25430255 0 0 Deletion 30452 LOC_Os11g42180 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-66 Chr11 25399803 25430255 0 0 Deletion 30452 LOC_Os11g42190 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-66 Chr11 25399803 25430255 0 0 Deletion 30452 LOC_Os11g42200 laccase precursor protein, putative, expressed FN-66 Chr11 25399803 25430255 0 0 Deletion 30452 LOC_Os11g42210 expressed protein FN-66 Chr11 25754712 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-66 Chr12 10274501 10274525 0 0 Deletion 24 FN-66 Chr12 13960431 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN-66 Chr12 17036139 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-66 Chr12 17540369 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39640 MYB family transcription factor, putative, expressed FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39650 tubulin, putative, expressed FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39660 calcium-transporting ATPase, plasma membrane-type, putative, expressed FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39670 expressed protein FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39680 retrotransposon protein, putative, unclassified, expressed FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39690 hypothetical protein FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39700 retrotransposon protein, putative, unclassified, expressed FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39710 expressed protein FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39730 retrotransposon protein, putative, unclassified, expressed FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39740 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39750 conserved hypothetical protein FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39760 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39770 expressed protein FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39780 retrotransposon protein, putative, unclassified, expressed FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39790 expressed protein FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39800 retrotransposon protein, putative, Ty1-copia subclass, expressed FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39810 expressed protein FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39830 cyclin, putative, expressed FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39840 expressed protein FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39850 helix-loop-helix DNA-binding domain containing protein, expressed FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39860 phosphoribosyl transferase, putative, expressed FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39870 expressed protein FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39880 expressed protein FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39890 expressed protein FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39900 transposon protein, putative, Mariner sub-class, expressed FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39910 expressed protein FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39920 expressed protein FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39930 expressed protein FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39940 retrotransposon protein, putative, unclassified, expressed FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39950 expressed protein FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39960 transposon protein, putative, unclassified, expressed FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39970 expressed protein FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39980 kinesin motor domain containing protein, putative, expressed FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g39990 dof zinc finger domain containing protein, putative, expressed FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g40000 expressed protein FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g40010 expressed protein FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g40020 retrotransposon protein, putative, unclassified, expressed FN-66 Chr12 24465001 24752000 0 0 Deletion 287000 LOC_Os12g40030 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-66 Chr2 10199560 T-A 0 0 Single Base Substitution 0 INTRON HOMO FN-66 Chr2 1196138 1196148 0 0 Deletion 10 FN-66 Chr2 17410169 17417980 0 0 Deletion 7811 LOC_Os02g29300 expressed protein FN-66 Chr2 17410169 17417980 0 0 Deletion 7811 LOC_Os02g29310 expressed protein FN-66 Chr2 17410169 17417980 0 0 Deletion 7811 LOC_Os02g29320 expressed protein FN-66 Chr2 20884260 21405346 0 0 Inversion 521086 LOC_Os02g34830 tetratricopeptide repeat domain containing protein, expressed FN-66 Chr2 21992675 22063636 0 0 Deletion 70961 LOC_Os02g36414 transporter family protein, putative, expressed FN-66 Chr2 21992675 22063636 0 0 Deletion 70961 LOC_Os02g36430 expressed protein FN-66 Chr2 21992675 22063636 0 0 Deletion 70961 LOC_Os02g36440 transporter family protein, putative, expressed FN-66 Chr2 21992675 22063636 0 0 Deletion 70961 LOC_Os02g36450 transporter family protein, putative, expressed FN-66 Chr2 21992675 22063636 0 0 Deletion 70961 LOC_Os02g36460 expressed protein FN-66 Chr2 21992675 22063636 0 0 Deletion 70961 LOC_Os02g36470 retrotransposon protein, putative, unclassified, expressed FN-66 Chr2 21992675 22063636 0 0 Deletion 70961 LOC_Os02g36480 retrotransposon protein, putative, unclassified, expressed FN-66 Chr2 21992675 22063636 0 0 Deletion 70961 LOC_Os02g36490 expressed protein FN-66 Chr2 21992675 22063636 0 0 Deletion 70961 LOC_Os02g36500 expressed protein FN-66 Chr2 21992675 22063636 0 0 Deletion 70961 LOC_Os02g36505 expressed protein FN-66 Chr2 21992675 22063636 0 0 Deletion 70961 LOC_Os02g36510 ethylene-insensitive 3, putative, expressed FN-66 Chr2 21992675 22063636 0 0 Deletion 70961 LOC_Os02g36520 OsFBK9 - F-box domain and kelch repeat containing protein, expressed FN-66 Chr2 22794862 22794866 0 0 Deletion 4 FN-66 Chr3 10190865 10190884 0 0 Deletion 19 FN-66 Chr3 1223449 1223451 0 0 Deletion 2 FN-66 Chr3 33753194 33753220 0 0 Deletion 26 FN-66 Chr3 34296734 34296749 0 0 Deletion 15 FN-66 Chr3 35198703 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g62120 heat shock protein DnaJ, putative, expressed FN-66 Chr3 896927 896957 0 0 Deletion 30 FN-66 Chr4 10717057 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g19270 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN-66 Chr4 11638495 11638496 0 0 Deletion 1 LOC_Os04g20749 expressed protein FN-66 Chr4 15325223 C-A 0 0 Single Base Substitution 0 STOP_GAINED HOMO LOC_Os04g26290 retrotransposon protein, putative, unclassified, expressed FN-66 Chr4 19045630 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN-66 Chr4 22746071 A-T 0 0 Single Base Substitution 0 INTRON HOMO FN-66 Chr4 8353902 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-66 Chr5 14444785 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN-66 Chr5 17872225 17872231 0 0 Deletion 6 FN-66 Chr5 19408095 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN-66 Chr5 24235700 24291181 0 0 Deletion 55481 LOC_Os05g41380 expressed protein FN-66 Chr5 24235700 24291181 0 0 Deletion 55481 LOC_Os05g41390 cyclin, putative, expressed FN-66 Chr5 24235700 24291181 0 0 Deletion 55481 LOC_Os05g41400 indole-3-acetate beta-glucosyltransferase, putative, expressed FN-66 Chr5 24235700 24291181 0 0 Deletion 55481 LOC_Os05g41410 retrotransposon protein, putative, unclassified, expressed FN-66 Chr5 24235700 24291181 0 0 Deletion 55481 LOC_Os05g41420 auxin-induced protein 5NG4, putative, expressed FN-66 Chr5 24235700 24291181 0 0 Deletion 55481 LOC_Os05g41430 expressed protein FN-66 Chr5 24235700 24291181 0 0 Deletion 55481 LOC_Os05g41440 cytochrome P450, putative, expressed FN-66 Chr5 24235700 24291181 0 0 Deletion 55481 LOC_Os05g41450 histone-like transcription factor and archaeal histone, putative, expressed FN-66 Chr5 24235700 24291181 0 0 Deletion 55481 LOC_Os05g41460 cysteine proteinase inhibitor precursor protein, putative, expressed FN-66 Chr5 24235700 24291181 0 0 Deletion 55481 LOC_Os05g41470 expressed protein FN-66 Chr5 24235700 24291181 0 0 Deletion 55481 LOC_Os05g41480 domain of unknown function, DUF250 domain containing protein, expressed FN-66 Chr5 24352187 G-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN-66 Chr6 20211010 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-66 Chr6 25778143 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-66 Chr6 27712182 T-G 0 0 Single Base Substitution 0 INTRON HET FN-66 Chr6 4479489 4479495 0 0 Deletion 6 FN-66 Chr6 7561931 7561931 0 0 Insertion 1 FN-66 Chr7 10427829 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-66 Chr9 20484284 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-66 Chr9 4155116 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-66 Chr9 6592142 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN-66 Chr9 8375445 A-G 0 0 Single Base Substitution 0 INTERGENIC HET